RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Plekhf1Q3TB82 279 aa21.24■□□□□ 0.99
Trim47-202ENSMUST00000106441 HlfQ8BW74 295 aa21.24■□□□□ 0.99
Trim47-202ENSMUST00000106441 Tmem266Q8BZB3 538 aa21.24■□□□□ 0.99
Trim47-202ENSMUST00000106441 Pms1Q8K119 917 aa21.24■□□□□ 0.99
Trim47-202ENSMUST00000106441 Pes1Q9EQ61 584 aaKnown RBP21.24■□□□□ 0.99
Trim47-202ENSMUST00000106441 Col4a3bpQ9EQG9 624 aa21.24■□□□□ 0.99
Trim47-202ENSMUST00000106441 Phrf1A6H619 1682 aa21.24■□□□□ 0.99
Trim47-202ENSMUST00000106441 Timm10P62073 90 aa21.23■□□□□ 0.99
Trim47-202ENSMUST00000106441 NpeppsQ11011 920 aa21.23■□□□□ 0.99
Trim47-202ENSMUST00000106441 Krt25Q8VCW2 446 aa21.23■□□□□ 0.99
Trim47-202ENSMUST00000106441 Rgs9O54828 675 aa21.23■□□□□ 0.99
Trim47-202ENSMUST00000106441 En2P09066 324 aa21.23■□□□□ 0.99
Trim47-202ENSMUST00000106441 Il15P48346 162 aa21.23■□□□□ 0.99
Trim47-202ENSMUST00000106441 Wdr19Q3UGF1 1341 aa21.22■□□□□ 0.99
Trim47-202ENSMUST00000106441 GabrdP22933 449 aa21.22■□□□□ 0.99
Trim47-202ENSMUST00000106441 Celf1P28659 486 aaKnown RBP21.22■□□□□ 0.99
Trim47-202ENSMUST00000106441 Srek1Q8BZX4 494 aaKnown RBP21.22■□□□□ 0.99
Trim47-202ENSMUST00000106441 Snw1Q9CSN1 536 aaKnown RBP21.22■□□□□ 0.99
Trim47-202ENSMUST00000106441 Ppil4Q9CXG3 492 aaKnown RBP21.22■□□□□ 0.99
Trim47-202ENSMUST00000106441 Kcnq2Q9Z351 759 aa21.22■□□□□ 0.99
Trim47-202ENSMUST00000106441 Znfx1Q8R151 1909 aaKnown RBP21.22■□□□□ 0.99
Trim47-202ENSMUST00000106441 Usp42B2RQC2 1324 aaKnown RBP21.22■□□□□ 0.99
Trim47-202ENSMUST00000106441 Mtcl1Q3UHU5 1945 aa21.21■□□□□ 0.99
Trim47-202ENSMUST00000106441 Hspd1P63038 573 aaKnown RBP21.21■□□□□ 0.99
Trim47-202ENSMUST00000106441 Fsd1Q7TPM6 496 aa21.21■□□□□ 0.99
Trim47-202ENSMUST00000106441 Ciapin1Q8WTY4 309 aa21.21■□□□□ 0.99
Trim47-202ENSMUST00000106441 Tulp1Q9Z273 543 aa21.21■□□□□ 0.99
Trim47-202ENSMUST00000106441 Tcof1O08784 1320 aaKnown RBP21.21■□□□□ 0.99
Trim47-202ENSMUST00000106441 Speer4dL7N216 212 aa21.21■□□□□ 0.99
Trim47-202ENSMUST00000106441 Tgfb2P27090 414 aa21.21■□□□□ 0.99
Trim47-202ENSMUST00000106441 NfixP70257 488 aa21.21■□□□□ 0.99
Trim47-202ENSMUST00000106441 Taf3Q5HZG4 932 aa21.21■□□□□ 0.99
Trim47-202ENSMUST00000106441 Glg1Q61543 1175 aaKnown RBP21.21■□□□□ 0.99
Trim47-202ENSMUST00000106441 Ifit1Q64282 463 aa21.21■□□□□ 0.99
Trim47-202ENSMUST00000106441 Lrrc8aQ80WG5 810 aa21.21■□□□□ 0.99
Trim47-202ENSMUST00000106441 Slu7Q8BHJ9 585 aa21.21■□□□□ 0.99
Trim47-202ENSMUST00000106441 AidaQ8C4Q6 305 aa21.21■□□□□ 0.99
Trim47-202ENSMUST00000106441 Telo2Q9DC40 840 aaKnown RBP21.21■□□□□ 0.99
Trim47-202ENSMUST00000106441 Zfp831A2ADM8 1628 aa21.2■□□□□ 0.98
Trim47-202ENSMUST00000106441 Ess2O70279 479 aa21.2■□□□□ 0.98
Trim47-202ENSMUST00000106441 Cyp2d10P24456 504 aa21.2■□□□□ 0.98
Trim47-202ENSMUST00000106441 Zkscan4Q5SZT6 480 aa21.2■□□□□ 0.98
Trim47-202ENSMUST00000106441 Nxf7Q80SZ6 620 aaKnown RBP21.2■□□□□ 0.98
Trim47-202ENSMUST00000106441 Pcdhb15Q91Y04 786 aa21.2■□□□□ 0.98
Trim47-202ENSMUST00000106441 Pus3Q9JI38 481 aa21.2■□□□□ 0.98
Trim47-202ENSMUST00000106441 Cct2P80314 535 aaKnown RBP21.2■□□□□ 0.98
Trim47-202ENSMUST00000106441 LyarQ08288 388 aaKnown RBP21.2■□□□□ 0.98
Trim47-202ENSMUST00000106441 Atp2b4Q6Q477 1205 aa21.2■□□□□ 0.98
Trim47-202ENSMUST00000106441 Kcnk13Q8R1P5 405 aa21.2■□□□□ 0.98
Trim47-202ENSMUST00000106441 WaslQ91YD9 501 aa21.2■□□□□ 0.98
Trim47-202ENSMUST00000106441 Creld2Q9CYA0 350 aa21.2■□□□□ 0.98
Trim47-202ENSMUST00000106441 Cfap99A0A140LIX9 648 aa21.19■□□□□ 0.98
Trim47-202ENSMUST00000106441 Zscan29E9Q5B4 869 aa21.19■□□□□ 0.98
Trim47-202ENSMUST00000106441 Asap2Q7SIG6 958 aa21.19■□□□□ 0.98
Trim47-202ENSMUST00000106441 Ppp4r3bQ922R5 820 aa21.19■□□□□ 0.98
Trim47-202ENSMUST00000106441 Ccer1Q9CQL2 403 aa21.19■□□□□ 0.98
Trim47-202ENSMUST00000106441 Usp21Q9QZL6 566 aa21.19■□□□□ 0.98
Trim47-202ENSMUST00000106441 Cyp2ab1S4R196 498 aa21.19■□□□□ 0.98
Trim47-202ENSMUST00000106441 Magea1O89006 320 aa21.19■□□□□ 0.98
Trim47-202ENSMUST00000106441 Magea5O89009 320 aa21.19■□□□□ 0.98
Trim47-202ENSMUST00000106441 Magea6O89010 325 aa21.19■□□□□ 0.98
Trim47-202ENSMUST00000106441 FosbP13346 338 aa21.19■□□□□ 0.98
Trim47-202ENSMUST00000106441 Magea3Q6T340 320 aa21.19■□□□□ 0.98
Trim47-202ENSMUST00000106441 Fez2Q6TYB5 348 aa21.19■□□□□ 0.98
Trim47-202ENSMUST00000106441 Pdzph1Q8BGR1 1238 aa21.19■□□□□ 0.98
Trim47-202ENSMUST00000106441 Magea2Q9R2A2 320 aa21.19■□□□□ 0.98
Trim47-202ENSMUST00000106441 Q8BZJ8 459 aa21.18■□□□□ 0.98
Trim47-202ENSMUST00000106441 Ddx41Q91VN6 622 aaKnown RBP21.18■□□□□ 0.98
Trim47-202ENSMUST00000106441 Dusp10Q9ESS0 483 aa21.18■□□□□ 0.98
Trim47-202ENSMUST00000106441 Hap1O35668 628 aa21.17■□□□□ 0.98
Trim47-202ENSMUST00000106441 Dhx40Q6PE54 779 aaKnown RBP21.17■□□□□ 0.98
Trim47-202ENSMUST00000106441 Ccdc82Q6PG04 518 aa21.17■□□□□ 0.98
Trim47-202ENSMUST00000106441 Ift57Q8BXG3 429 aa21.17■□□□□ 0.98
Trim47-202ENSMUST00000106441 CrebrfQ8CDG5 640 aaKnown RBP21.17■□□□□ 0.98
Trim47-202ENSMUST00000106441 Otud6bQ8K2H2 294 aa21.17■□□□□ 0.98
Trim47-202ENSMUST00000106441 Slc14a2Q8R4T9 930 aa21.17■□□□□ 0.98
Trim47-202ENSMUST00000106441 Taf1dQ9D4V4 322 aa21.17■□□□□ 0.98
Trim47-202ENSMUST00000106441 Slfn1Q9Z0I7 337 aa21.17■□□□□ 0.98
Trim47-202ENSMUST00000106441 Nup98Q6PFD9 1816 aaKnown RBP21.17■□□□□ 0.98
Trim47-202ENSMUST00000106441 Pcsk7Q61139 770 aa21.17■□□□□ 0.98
Trim47-202ENSMUST00000106441 Lmod3E9QA62 571 aa21.16■□□□□ 0.98
Trim47-202ENSMUST00000106441 TsksO54887 585 aa21.16■□□□□ 0.98
Trim47-202ENSMUST00000106441 Casp1P29452 402 aa21.16■□□□□ 0.98
Trim47-202ENSMUST00000106441 Sept1P42209 366 aa21.16■□□□□ 0.98
Trim47-202ENSMUST00000106441 Zfp397Q7TNK4 527 aa21.16■□□□□ 0.98
Trim47-202ENSMUST00000106441 Hirip3Q8BLH7 601 aa21.16■□□□□ 0.98
Trim47-202ENSMUST00000106441 Lmbrd2Q8C561 694 aa21.16■□□□□ 0.98
Trim47-202ENSMUST00000106441 Vps33aQ9D2N9 598 aa21.16■□□□□ 0.98
Trim47-202ENSMUST00000106441 Carmil3Q3UFQ8 1375 aa21.16■□□□□ 0.98
Trim47-202ENSMUST00000106441 Gm4340L7N2C4 268 aa21.16■□□□□ 0.98
Trim47-202ENSMUST00000106441 EgfrQ01279 1210 aa21.16■□□□□ 0.98
Trim47-202ENSMUST00000106441 Cep135Q6P5D4 1140 aa21.16■□□□□ 0.98
Trim47-202ENSMUST00000106441 Tmem67Q8BR76 992 aa21.16■□□□□ 0.98
Trim47-202ENSMUST00000106441 Kcnq5Q9JK45 933 aa21.16■□□□□ 0.98
Trim47-202ENSMUST00000106441 Cdc45Q9Z1X9 566 aa21.16■□□□□ 0.98
Trim47-202ENSMUST00000106441 Ccne2Q9Z238 404 aa21.16■□□□□ 0.98
Trim47-202ENSMUST00000106441 EvplQ9D952 2035 aa21.15■□□□□ 0.98
Trim47-202ENSMUST00000106441 Slc4a1P04919 929 aa21.15■□□□□ 0.98
Trim47-202ENSMUST00000106441 Kcnd1Q03719 651 aa21.15■□□□□ 0.98
Trim47-202ENSMUST00000106441 Ube2oQ6ZPJ3 1288 aa21.15■□□□□ 0.98
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms