RNA–Protein interactions for RNA: ENSMUST00000102612.1

Ccdc42-202, Transcript of Coiled-coil domain-containing protein 42, mousemouse

TSL 1 (best) BASIC

Gene Ccdc42, Length 785 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc42-202ENSMUST00000102612 Ubxn11Q9D572 484 aa12.46□□□□□ -0.41
Ccdc42-202ENSMUST00000102612 Fndc3c1Q6DFV6 1356 aa12.45□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Mmp20P57748 482 aa12.45□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Grm1P97772 1199 aa12.45□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Asap2Q7SIG6 958 aa12.45□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Ankrd13aQ80UP5 588 aa12.45□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Lrrc24Q8BHA1 521 aa12.45□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Gpr37l1Q99JG2 481 aa12.45□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Txnrd3Q99MD6 652 aa12.45□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Txnrd2Q9JLT4 524 aa12.45□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Dicer1Q8R418 1916 aa12.45□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Aox4Q3TYQ9 1336 aa12.44□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Tuft1O08970 390 aa12.44□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Hap1O35668 628 aa12.44□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Slc4a1P04919 929 aa12.44□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Sox10Q04888 466 aa12.44□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Otud5Q3U2S4 566 aa12.44□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Trim27Q62158 513 aa12.44□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Nlrp9aQ66X03 949 aa12.44□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Cnksr2Q80YA9 1032 aa12.44□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Slc26a8Q8R0C3 999 aa12.44□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Cd2apQ9JLQ0 637 aa12.44□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Gm43951A0A0N4SUT6 962 aa12.43□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Cfap99A0A140LIX9 648 aa12.43□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Flvcr1B2RXV4 560 aa12.43□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Cntnap3E9PY62 1287 aa12.43□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 NeflP08551 543 aa12.43□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Slc7a3P70423 618 aa12.43□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Ppm1jQ149T7 507 aa12.43□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Tbc1d2bQ3U0J8 965 aa12.43□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Znf692Q3U381 531 aa12.43□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Mctp2Q5RJH2 878 aa12.43□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 DbnlQ62418 436 aa12.43□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 GorabQ8BRM2 368 aa12.43□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Tmem266Q8BZB3 538 aa12.43□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 PpatQ8CIH9 517 aa12.43□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Smarca5Q91ZW3 1051 aaKnown RBP12.43□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Hps4Q99KG7 671 aa12.43□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Armcx1Q9CX83 456 aa12.43□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Bag3Q9JLV1 577 aaKnown RBP12.43□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Prl7d1P04769 244 aa12.42□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Bace1P56818 501 aa12.42□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Gprin1Q3UNH4 932 aa12.42□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Specc1Q5SXY1 1067 aa12.42□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Abtb2Q7TQI7 1024 aa12.42□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Mbtps2Q8CHX6 515 aa12.42□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Syne4Q8CII8 388 aa12.42□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Riok1Q922Q2 567 aa12.42□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Eif2s2Q99L45 331 aaKnown RBP12.42□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Htra3Q9D236 459 aa12.42□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Syt5Q9R0N5 386 aa12.42□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Bcorl1A2AQH4 1781 aa12.42□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Myh6Q02566 1938 aaKnown RBP12.42□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 XdhQ00519 1335 aa12.41□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Stat5bP42232 786 aa12.41□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Csrnp3P59055 597 aa12.41□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Wdr70Q3TWF6 657 aa12.41□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 SfswapQ3USH5 945 aaKnown RBP12.41□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Zbtb45Q52KG4 520 aa12.41□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Sf3a1Q8K4Z5 791 aaKnown RBP12.41□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Vmn1r199Q8R280 367 aa12.41□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 MyocdQ8VIM5 935 aa12.41□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Rfc4Q99J62 364 aa12.41□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Ccdc88aQ5SNZ0 1873 aa12.4□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Cacna1fQ9JIS7 1985 aa12.4□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 AU019823E9PUQ3 292 aa12.4□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 ArxO35085 564 aa12.4□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Mmp10O55123 476 aa12.4□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Grem2O88273 168 aa12.4□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Prl3d1P18121 224 aa12.4□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Gjb1P28230 283 aa12.4□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Ces5aQ6AW46 575 aa12.4□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Tmc4Q7TQ65 694 aa12.4□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Fam160b2Q80YR2 744 aa12.4□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Fam155aQ8CCS2 467 aa12.4□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Rgs12Q8CGE9 1381 aa12.4□□□□□ -0.42
Ccdc42-202ENSMUST00000102612 Cyp2b10P12791 500 aa12.39□□□□□ -0.43
Ccdc42-202ENSMUST00000102612 Gba2Q69ZF3 918 aa12.39□□□□□ -0.43
Ccdc42-202ENSMUST00000102612 Ltv1Q6NSQ7 470 aaKnown RBP12.39□□□□□ -0.43
Ccdc42-202ENSMUST00000102612 Krt25Q8VCW2 446 aa12.39□□□□□ -0.43
Ccdc42-202ENSMUST00000102612 FanclQ9CR14 375 aa12.39□□□□□ -0.43
Ccdc42-202ENSMUST00000102612 Mbd3Q9Z2D8 285 aaKnown RBP12.39□□□□□ -0.43
Ccdc42-202ENSMUST00000102612 TnksQ6PFX9 1320 aa12.38□□□□□ -0.43
Ccdc42-202ENSMUST00000102612 Col20a1Q923P0 1320 aa12.38□□□□□ -0.43
Ccdc42-202ENSMUST00000102612 Tbc1d8bA3KGB4 1114 aa12.38□□□□□ -0.43
Ccdc42-202ENSMUST00000102612 Oog1E9Q5G7 496 aa12.38□□□□□ -0.43
Ccdc42-202ENSMUST00000102612 Gm8882E9Q7E4 283 aa12.38□□□□□ -0.43
Ccdc42-202ENSMUST00000102612 Slc27a3O88561 667 aa12.38□□□□□ -0.43
Ccdc42-202ENSMUST00000102612 Eif5P59325 429 aaKnown RBP12.38□□□□□ -0.43
Ccdc42-202ENSMUST00000102612 Fads2p1Q0VAX3 487 aa12.38□□□□□ -0.43
Ccdc42-202ENSMUST00000102612 Nol8Q3UHX0 1147 aaKnown RBP12.38□□□□□ -0.43
Ccdc42-202ENSMUST00000102612 Cdcp1Q5U462 833 aa12.38□□□□□ -0.43
Ccdc42-202ENSMUST00000102612 Ube3cQ80U95 1083 aa12.38□□□□□ -0.43
Ccdc42-202ENSMUST00000102612 Map10Q8BJS7 891 aa12.38□□□□□ -0.43
Ccdc42-202ENSMUST00000102612 Amer2Q8CCJ4 672 aa12.38□□□□□ -0.43
Ccdc42-202ENSMUST00000102612 Phf20l1Q8CCJ9 1013 aa12.38□□□□□ -0.43
Ccdc42-202ENSMUST00000102612 Tut1Q8R3F9 869 aa12.38□□□□□ -0.43
Ccdc42-202ENSMUST00000102612 Taf5lQ91WQ5 589 aa12.38□□□□□ -0.43
Ccdc42-202ENSMUST00000102612 Mei1Q9D4I2 1268 aa12.38□□□□□ -0.43
Ccdc42-202ENSMUST00000102612 Dclk1Q9JLM8 756 aa12.38□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 22.6 ms