RNA–Protein interactions for RNA: ENSMUST00000088355.11

Col2a1-202, Transcript of Collagen alpha-1(II) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col2a1, Length 4,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-202ENSMUST00000088355 Tmx1Q8VBT0 278 aa16.08■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Gtf2iQ9ESZ8 998 aaKnown RBP16.08■□□□□ 0.16
Col2a1-202ENSMUST00000088355 TnrQ8BYI9 1358 aa16.08■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Ets1P27577 440 aa16.08■□□□□ 0.16
Col2a1-202ENSMUST00000088355 SdsQ8VBT2 327 aa16.08■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Xpo5Q924C1 1204 aaKnown RBP16.08■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Cbx1P83917 185 aaKnown RBP16.07■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Pex1Q5BL07 1284 aa16.07■□□□□ 0.16
Col2a1-202ENSMUST00000088355 LarsQ8BMJ2 1178 aa16.07■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Adarb2Q9JI20 745 aa16.07■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Mylk2Q8VCR8 613 aa16.07■□□□□ 0.16
Col2a1-202ENSMUST00000088355 1700018F24RikB2RW27 314 aa16.07■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Gm10378F6XQQ1 160 aa16.07■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Iqsec3Q3TES0 1195 aa16.07■□□□□ 0.16
Col2a1-202ENSMUST00000088355 SfpqQ8VIJ6 699 aaKnown RBP16.07■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Ppp6r3Q922D4 844 aa16.07■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Clasp1Q80TV8 1535 aaKnown RBP16.07■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Gm28047Q3US59 414 aa16.06■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Usp33Q8R5K2 909 aa16.06■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Hsf2bpQ9D4G2 338 aa16.06■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Tbc1d2B1AVH7 922 aa16.06■□□□□ 0.16
Col2a1-202ENSMUST00000088355 NfkbibQ60778 359 aa16.06■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Mcm7Q61881 719 aaKnown RBP16.06■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Kdm1aQ6ZQ88 853 aa16.06■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Ctdp1Q7TSG2 960 aa16.06■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Galnt17Q7TT15 598 aa16.06■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Ubash3aQ3V3E1 624 aa16.06■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Sestd1Q80UK0 696 aa16.06■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Sass6Q80UK7 654 aa16.06■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Tnip1Q9WUU8 647 aa16.06■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Uso1Q9Z1Z0 959 aaKnown RBP16.06■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Fmnl3Q6ZPF4 1028 aa16.06■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Gdf11Q9Z1W4 405 aa16.06■□□□□ 0.16
Col2a1-202ENSMUST00000088355 E9QMW4 1145 aa16.05■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Gm42641I6L9G2 585 aa16.05■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Vmn2r68L7N2B3 851 aa16.05■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Tagap1P0CAX8 505 aa16.05■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Psmd1Q3TXS7 953 aa16.05■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Fgfr1opQ66JX5 399 aa16.05■□□□□ 0.16
Col2a1-202ENSMUST00000088355 AtripQ8BMG1 785 aa16.05■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Tmco5aQ9D9D5 303 aa16.05■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Ppp1r3fQ9JIG4 799 aa16.05■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Setdb1O88974 1307 aa16.05■□□□□ 0.16
Col2a1-202ENSMUST00000088355 EspnlQ3UYR4 1005 aa16.05■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Uggt1Q6P5E4 1551 aa16.05■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Kifap3P70188 793 aa16.05■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Clcn1Q64347 994 aa16.05■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Stn1Q8K2X3 378 aa16.05■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Stag1Q9D3E6 1258 aa16.05■□□□□ 0.16
Col2a1-202ENSMUST00000088355 1700006A11RikB9EHI3 544 aa16.05■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Prl7a2O54831 253 aa16.05■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Cap2Q9CYT6 476 aa16.05■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Ccdc83Q9D4V3 305 aa16.05■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Abcc4E9Q236 1325 aa16.04■□□□□ 0.16
Col2a1-202ENSMUST00000088355 MeiocA2AG06 965 aa16.04■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Gm1993A6X8I0 212 aa16.04■□□□□ 0.16
Col2a1-202ENSMUST00000088355 SlxD3Z347 212 aa16.04■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Ppp1r9aH3BJD6 1292 aa16.04■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Cyp27a1Q9DBG1 533 aa16.04■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Gm4340L7N2C4 268 aa16.04■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Lrrc36Q3V0M2 755 aa16.04■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Ccdc42Q5SV66 316 aa16.04■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Zcwpw1Q6IR42 630 aa16.04■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Cep63Q3UPP8 700 aa16.03■□□□□ 0.16
Col2a1-202ENSMUST00000088355 PigbQ9JJQ0 542 aa16.03■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Aox1O54754 1333 aa16.03■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Col1a2Q01149 1372 aa16.03■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Trim55G3X8Y1 545 aa16.03■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Tcerg1lQ3B807 590 aa16.03■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Zkscan4Q5SZT6 480 aa16.03■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Rbm43Q99J64 343 aa16.03■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Trmt44Q9D2Q2 713 aa16.03■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Egfl6Q9JJZ5 550 aa16.03■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Tarbp1E9Q368 1579 aa16.03■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Nlrx1Q3TL44 975 aa16.03■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Iffo1Q8BXL9 562 aa16.03■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Tmod4Q9JLH8 345 aa16.03■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Atp12aQ9Z1W8 1035 aa16.03■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Wdr70Q3TWF6 657 aa16.03■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Igbp1Q61249 340 aa16.03■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Tmx4Q8C0L0 335 aa16.03■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Gm45015A0A140LII9 184 aa16.02■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Prpf38aQ4FK66 312 aaKnown RBP16.02■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Znf771Q8BJ90 317 aa16.02■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Pym1Q8CHP5 203 aaKnown RBP16.02■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Bbof1Q3V079 533 aa16.02■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Ctr9Q62018 1173 aaKnown RBP16.02■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Zbtb1Q91VL9 713 aa16.02■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Ncoa5Q91W39 579 aaKnown RBP16.02■□□□□ 0.16
Col2a1-202ENSMUST00000088355 Dis3l2Q8CI75 870 aaKnown RBP16.02■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Smc1aQ9CU62 1233 aaKnown RBP16.02■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Zscan18E9PUD6 809 aa16.02■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Pde8bE9Q4S1 865 aa16.02■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Pagr1bF6V0H0 108 aa16.02■□□□□ 0.15
Col2a1-202ENSMUST00000088355 RalylQ8BTF8 293 aa16.02■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Ddx27Q921N6 760 aaKnown RBP16.02■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Pagr1aQ99L02 253 aa16.02■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Krt13P08730 437 aa16.01■□□□□ 0.15
Col2a1-202ENSMUST00000088355 ErmnQ5EBJ4 281 aa16.01■□□□□ 0.15
Col2a1-202ENSMUST00000088355 Ube3bQ9ES34 1070 aa16.01■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms