RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Ttc14Q9CSP9 761 aa13.13□□□□□ -0.31
Ddx55-201ENSMUST00000071057 CrcpO35427 148 aa13.13□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Hap1O35668 628 aa13.13□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Il17raQ60943 864 aa13.13□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Myl10Q62082 202 aa13.13□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Polr3gQ6NXY9 223 aa13.13□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Gimap8Q75N62 688 aa13.13□□□□□ -0.31
Ddx55-201ENSMUST00000071057 CrebrfQ8CDG5 640 aaKnown RBP13.13□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Bicd2Q921C5 820 aa13.13□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Pde3aQ9Z0X4 1141 aa13.13□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Mast3Q3U214 1321 aa13.13□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Cfap44E9Q5M6 1843 aa13.12□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Klhl23Q6GQU2 558 aa13.12□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Abtb2Q7TQI7 1024 aa13.12□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Anapc4Q91W96 807 aa13.12□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Zbtb43Q9DAI4 467 aa13.12□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Ipo7Q9EPL8 1038 aaKnown RBP13.12□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Utp3Q9JI13 469 aaKnown RBP13.12□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Ccdc82Q6PG04 518 aa13.12□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Alx1Q8C8B0 326 aa13.12□□□□□ -0.31
Ddx55-201ENSMUST00000071057 MypopQ8R4U1 393 aa13.12□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Eaf2Q91ZD6 262 aa13.12□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Odf2lQ9D478 642 aa13.12□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Gja10Q9WUS4 505 aa13.12□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Foxo3Q9WVH4 672 aa13.12□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Eva1cP58659 440 aa13.11□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Agtpbp1Q641K1 1218 aa13.11□□□□□ -0.31
Ddx55-201ENSMUST00000071057 U2af1l4Q8BGJ9 220 aa13.11□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Terf2ipQ91VL8 393 aa13.11□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Ppfibp2O35711 882 aa13.11□□□□□ -0.31
Ddx55-201ENSMUST00000071057 NapbP28663 298 aa13.11□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Rtkn2Q14B46 604 aa13.11□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Usp28Q5I043 1051 aa13.11□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Snx13Q6PHS6 957 aa13.11□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Sept9Q80UG5 583 aa13.11□□□□□ -0.31
Ddx55-201ENSMUST00000071057 DymQ8CHY3 669 aa13.11□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Trim59Q922Y2 403 aa13.11□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Cfap73J3QPZ5 306 aa13.1□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Nme8Q715T0 586 aa13.1□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Rbm43Q99J64 343 aa13.1□□□□□ -0.31
Ddx55-201ENSMUST00000071057 FliiQ9JJ28 1271 aa13.1□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Lgr5Q9Z1P4 907 aa13.1□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Myh2G3UW82 1942 aa13.1□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Csrnp1P59054 583 aa13.1□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Lins1Q3U1D0 764 aa13.1□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Lrrc43Q3V0L5 667 aa13.1□□□□□ -0.31
Ddx55-201ENSMUST00000071057 PdcQ9QW08 244 aa13.1□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Mtmr7Q9Z2C9 660 aa13.1□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Cyp3a59D3Z2W7 503 aa13.09□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Ube4aE9Q735 1028 aa13.09□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Sema6bO54951 886 aa13.09□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Mta1Q8K4B0 715 aaKnown RBP13.09□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Pcdhb22Q91XZ8 794 aa13.09□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Iqca1Q9CUL5 857 aa13.09□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Pold4Q9CWP8 107 aa13.09□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Ccdc97Q9DBT3 340 aa13.09□□□□□ -0.31
Ddx55-201ENSMUST00000071057 ParvgQ9ERD8 331 aa13.09□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Cntnap1O54991 1385 aa13.09□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Npy5rO70342 466 aa13.09□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Slc4a4O88343 1079 aa13.09□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Celf1P28659 486 aaKnown RBP13.09□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Tpcn2Q8BWC0 731 aa13.09□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Emilin2Q8K482 1074 aa13.09□□□□□ -0.31
Ddx55-201ENSMUST00000071057 InhbeO08717 350 aa13.09□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Trap1aP19473 224 aa13.09□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Kcnb1Q03717 857 aa13.09□□□□□ -0.31
Ddx55-201ENSMUST00000071057 LyarQ08288 388 aaKnown RBP13.09□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Pank2Q3U4S0 443 aa13.09□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Lrit1Q8K099 624 aa13.09□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Kiaa0319lQ8K135 1048 aa13.09□□□□□ -0.31
Ddx55-201ENSMUST00000071057 CerkQ8K4Q7 531 aa13.09□□□□□ -0.31
Ddx55-201ENSMUST00000071057 HmcesQ8R1M0 353 aaKnown RBP13.09□□□□□ -0.31
Ddx55-201ENSMUST00000071057 SdsQ8VBT2 327 aa13.09□□□□□ -0.31
Ddx55-201ENSMUST00000071057 TnmdQ9EP64 317 aa13.09□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Osbpl5Q9ER64 874 aa13.09□□□□□ -0.31
Ddx55-201ENSMUST00000071057 Myh3P13541 1940 aa13.08□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Wdr33Q8K4P0 1330 aaKnown RBP13.08□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Klhl34A2AI76 644 aa13.08□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Kansl3A2RSY1 903 aaKnown RBP13.08□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Mctp1E9PV86 951 aa13.08□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Zbtb21E9Q444 1094 aa13.08□□□□□ -0.32
Ddx55-201ENSMUST00000071057 1700113H08RikE9Q9Q5 327 aa13.08□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Cyp26a1O55127 497 aa13.08□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Me1P06801 572 aa13.08□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Atp1a3Q6PIC6 1013 aa13.08□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Snrnp27Q8K194 155 aa13.08□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Lrrc2Q8VDB8 371 aa13.08□□□□□ -0.32
Ddx55-201ENSMUST00000071057 4930519G04RikQ9CPT7 205 aa13.08□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Sh3bgrQ9WUZ7 214 aa13.08□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Irs4Q9Z0Y7 1216 aa13.08□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Tnni2P13412 182 aa13.08□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Pde6aP27664 859 aa13.08□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Spout1Q3UHX9 385 aaKnown RBP13.08□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Ctr9Q62018 1173 aaKnown RBP13.08□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Cyp24a1Q64441 514 aa13.08□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Tbc1d30Q69ZT9 766 aa13.08□□□□□ -0.32
Ddx55-201ENSMUST00000071057 SrrtQ99MR6 875 aaKnown RBP13.08□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Ltbp1Q8CG19 1712 aa13.07□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Casz1Q9CWL2 1761 aa13.07□□□□□ -0.32
Ddx55-201ENSMUST00000071057 Cfap99A0A140LIX9 648 aa13.07□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 19.6 ms