RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Smco2Q9DA21 347 aa20.73■□□□□ 0.91
Scaf11-201ENSMUST00000047835 Gas8Q60779 478 aa20.73■□□□□ 0.91
Scaf11-201ENSMUST00000047835 PaoxQ8C0L6 504 aa20.73■□□□□ 0.91
Scaf11-201ENSMUST00000047835 Rbm33Q9CXK9 1231 aaKnown RBP20.73■□□□□ 0.91
Scaf11-201ENSMUST00000047835 Gm28047Q3US59 414 aa20.73■□□□□ 0.91
Scaf11-201ENSMUST00000047835 Nlrp1aQ2LKU9 1182 aa20.72■□□□□ 0.91
Scaf11-201ENSMUST00000047835 Ccdc89Q9DA73 370 aa20.72■□□□□ 0.91
Scaf11-201ENSMUST00000047835 Kiaa1107Q80TK0 1369 aa20.72■□□□□ 0.91
Scaf11-201ENSMUST00000047835 Gm10378F6XQQ1 160 aa20.72■□□□□ 0.91
Scaf11-201ENSMUST00000047835 Fermt1P59113 677 aa20.72■□□□□ 0.91
Scaf11-201ENSMUST00000047835 Kdm1aQ6ZQ88 853 aa20.72■□□□□ 0.91
Scaf11-201ENSMUST00000047835 Egfl6Q9JJZ5 550 aa20.72■□□□□ 0.91
Scaf11-201ENSMUST00000047835 Pold4Q9CWP8 107 aa20.72■□□□□ 0.91
Scaf11-201ENSMUST00000047835 Syce1Q9D495 329 aa20.72■□□□□ 0.91
Scaf11-201ENSMUST00000047835 Plch2A2AP18 1501 aa20.72■□□□□ 0.91
Scaf11-201ENSMUST00000047835 Plbd2Q3TCN2 594 aa20.72■□□□□ 0.91
Scaf11-201ENSMUST00000047835 Tmtc2Q56A06 836 aa20.72■□□□□ 0.91
Scaf11-201ENSMUST00000047835 Gpcpd1Q8C0L9 675 aa20.72■□□□□ 0.91
Scaf11-201ENSMUST00000047835 Mtmr7Q9Z2C9 660 aa20.72■□□□□ 0.91
Scaf11-201ENSMUST00000047835 Myom2Q14BI5 1463 aa20.72■□□□□ 0.91
Scaf11-201ENSMUST00000047835 Map2k1P31938 393 aa20.72■□□□□ 0.91
Scaf11-201ENSMUST00000047835 Pard3Q99NH2 1333 aa20.71■□□□□ 0.91
Scaf11-201ENSMUST00000047835 PparaP23204 468 aa20.71■□□□□ 0.91
Scaf11-201ENSMUST00000047835 Ddx27Q921N6 760 aaKnown RBP20.71■□□□□ 0.91
Scaf11-201ENSMUST00000047835 Tdo2P48776 406 aa20.71■□□□□ 0.91
Scaf11-201ENSMUST00000047835 Hmgb1P63158 215 aaKnown RBP20.71■□□□□ 0.91
Scaf11-201ENSMUST00000047835 Abcb4P21440 1276 aa20.71■□□□□ 0.91
Scaf11-201ENSMUST00000047835 Kiaa1551Q5DTW7 1521 aa20.71■□□□□ 0.91
Scaf11-201ENSMUST00000047835 Il15P48346 162 aa20.71■□□□□ 0.91
Scaf11-201ENSMUST00000047835 Taf5lQ91WQ5 589 aa20.71■□□□□ 0.91
Scaf11-201ENSMUST00000047835 Tbc1d2B1AVH7 922 aa20.7■□□□□ 0.91
Scaf11-201ENSMUST00000047835 Kcnh3Q9WVJ0 1095 aa20.7■□□□□ 0.91
Scaf11-201ENSMUST00000047835 MaeaQ4VC33 396 aa20.7■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Pus7B7ZNL8 666 aaKnown RBP20.7■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Iqsec3Q3TES0 1195 aa20.7■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Adarb2Q9JI20 745 aa20.7■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Rbm43Q99J64 343 aa20.7■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Pim2Q62070 370 aa20.7■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Scaf1Q5U4C3 1256 aaKnown RBP20.69■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Ddx31Q6NZQ2 687 aaKnown RBP20.69■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Polr2dQ9D7M8 142 aaKnown RBP20.69■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Col20a1Q923P0 1320 aa20.69■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Gtpbp6Q3U6U5 514 aa20.69■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Smc1bQ920F6 1248 aa20.69■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Uso1Q9Z1Z0 959 aaKnown RBP20.69■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Zbtb1Q91VL9 713 aa20.69■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Emilin1Q99K41 1017 aa20.69■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Capza3P70190 299 aa20.69■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Rapgef1Q3UHC1 1224 aa20.69■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Fam177a1Q8BR63 207 aa20.69■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Zswim4Q8C7B8 1101 aa20.69■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Nxf1Q99JX7 618 aaKnown RBP20.69■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Cnpy2Q9QXT0 182 aa20.69■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Ccdc42Q5SV66 316 aa20.68■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Nap1l4Q78ZA7 375 aaKnown RBP20.68■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Slc18a1Q8R090 521 aa20.68■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Cdhr2E9Q7P9 1308 aa20.68■□□□□ 0.9
Scaf11-201ENSMUST00000047835 LarsQ8BMJ2 1178 aa20.68■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Tns3Q5SSZ5 1440 aa20.68■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Gm45015A0A140LII9 184 aa20.68■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Ctr9Q62018 1173 aaKnown RBP20.68■□□□□ 0.9
Scaf11-201ENSMUST00000047835 SfpqQ8VIJ6 699 aaKnown RBP20.68■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Kif17Q99PW8 1038 aa20.68■□□□□ 0.9
Scaf11-201ENSMUST00000047835 E9QMW4 1145 aa20.67■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Csrnp2Q8BGQ2 534 aa20.67■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Ppfibp1Q8C8U0 969 aaKnown RBP20.67■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Enox2Q8R0Z2 598 aa20.67■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Calml3Q9D6P8 149 aa20.67■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Tmx3Q8BXZ1 456 aa20.67■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Ifih1Q8R5F7 1025 aa20.67■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Stag1Q9D3E6 1258 aa20.67■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Ccdc94Q9D6J3 314 aa20.67■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Eif2ak4Q9QZ05 1648 aa20.67■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Sass6Q80UK7 654 aa20.67■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Tmco5aQ9D9D5 303 aa20.67■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Cpb1B2RS76 415 aa20.67■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Depdc1bQ8BH88 529 aa20.67■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Yars2Q8BYL4 472 aaKnown RBP20.67■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Ncapd2Q8K2Z4 1392 aa20.67■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Eya3P97480 510 aa20.66■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Asic3Q6X1Y6 530 aa20.66■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Ctage5Q8R311 779 aa20.66■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Usp19Q3UJD6 1360 aa20.66■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Apol10bG3X9K7 334 aa20.66■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Atf5O70191 283 aa20.66■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Zkscan4Q5SZT6 480 aa20.66■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Tldc2A2ACG1 198 aa20.66■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Gpbp1Q6NXH3 473 aaKnown RBP20.66■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Tmem119Q8R138 280 aa20.66■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Ssfa2Q922B9 1252 aa20.66■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Myo3aQ8K3H5 1613 aa20.66■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Gm1993A6X8I0 212 aa20.66■□□□□ 0.9
Scaf11-201ENSMUST00000047835 SlxD3Z347 212 aa20.66■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Psmb7P70195 277 aa20.66■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Efhd1Q9D4J1 240 aa20.65■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Vmn1r199Q8R280 367 aa20.65■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Noc2lQ9WV70 747 aaKnown RBP20.65■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Smarcad1Q04692 1021 aa20.65■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Armc2Q3URY6 854 aa20.65■□□□□ 0.9
Scaf11-201ENSMUST00000047835 Bbof1Q3V079 533 aa20.65■□□□□ 0.9
Retrieved 100 of 22,080 RNA–protein pairs in 14.1 ms