RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Map3k11Q80XI6 850 aa11.24□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Maip1Q8BHE8 291 aa11.24□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Six6os1Q9CTN5 574 aa11.24□□□□□ -0.61
Ldlr-201ENSMUST00000034713 AmfrQ9R049 643 aa11.24□□□□□ -0.61
Ldlr-201ENSMUST00000034713 1700029H14RikE9PY36 240 aa11.24□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Znf568E9PYI1 671 aa11.24□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Ccdc85cE9Q6B2 420 aa11.24□□□□□ -0.61
Ldlr-201ENSMUST00000034713 GnaqP21279 359 aa11.24□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Gas8Q60779 478 aa11.24□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Olfm5Q8BU90 496 aa11.24□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Hdac9Q99N13 588 aa11.24□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Ssr1Q9CY50 286 aaKnown RBP11.24□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Col4a3bpQ9EQG9 624 aa11.24□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Trpm1Q2TV84 1622 aa11.24□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Tpx2A2APB8 745 aaKnown RBP11.24□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Vwa3bJ9JI28 736 aa11.24□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Calm1P0DP26 149 aaKnown RBP11.24□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Calm2P0DP27 149 aaKnown RBP11.24□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Calm3P0DP28 149 aaKnown RBP11.24□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Ftl2P49945 183 aa11.24□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Ccdc129Q14B48 1034 aa11.24□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Vps54Q5SPW0 977 aa11.24□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Krt79Q8VED5 531 aa11.24□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Lrrfip2Q91WK0 415 aa11.24□□□□□ -0.61
Ldlr-201ENSMUST00000034713 CpvlQ9D3S9 478 aa11.24□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Aox2Q5SGK3 1345 aa11.23□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Prr5lA2AVJ5 370 aa11.23□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Ttll7A4Q9F0 912 aa11.23□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Ercc3P49135 783 aa11.23□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Hdhd2Q3UGR5 259 aa11.23□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Pram1Q6BCL1 675 aa11.23□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Ift74Q8BKE9 600 aa11.23□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Q8BZJ8 459 aa11.23□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Spats2Q8K1N4 545 aaKnown RBP11.23□□□□□ -0.61
Ldlr-201ENSMUST00000034713 MpndQ3TV65 487 aa11.23□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Pla2g4fQ50L41 855 aa11.23□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Ift122Q6NWV3 1182 aa11.23□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Tcp11l1Q8BTG3 509 aa11.23□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Xrcc4Q924T3 326 aa11.23□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Lmtk3Q5XJV6 1424 aa11.23□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Cep63Q3UPP8 700 aa11.23□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Vps37dQ810I0 261 aa11.23□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Iffo1Q8BXL9 562 aa11.23□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Terf2ipQ91VL8 393 aa11.23□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Tagap1P0CAX8 505 aa11.23□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Ssrp1Q08943 708 aaKnown RBP11.23□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Fgfr1opQ66JX5 399 aa11.23□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Yeats4Q9CR11 227 aaKnown RBP11.23□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Tmem131lQ3U3D7 1597 aa11.22□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Slc1a4O35874 532 aa11.22□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Rps8P62242 208 aaKnown RBP11.22□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Lmod1Q8BVA4 595 aa11.22□□□□□ -0.61
Ldlr-201ENSMUST00000034713 SnrkQ8VDU5 748 aa11.22□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Kif2cQ922S8 721 aa11.22□□□□□ -0.61
Ldlr-201ENSMUST00000034713 PplQ9R269 1755 aa11.22□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Gm3409A0A0G2JE67 319 aa11.22□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Specc1lQ2KN98 1118 aaKnown RBP11.22□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Ubash3aQ3V3E1 624 aa11.22□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Nlrp9aQ66X03 949 aa11.22□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Znf526Q8BI66 675 aa11.22□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Skor1Q8BX46 964 aa11.22□□□□□ -0.61
Ldlr-201ENSMUST00000034713 DymQ8CHY3 669 aa11.22□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Plcd3Q8K2J0 785 aa11.22□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Tnnc1P19123 161 aa11.22□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Gbp1Q01514 589 aa11.22□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Ankrd40Q5SUE8 363 aa11.22□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Fnbp4Q6ZQ03 1031 aa11.22□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Fam186bD3Z420 943 aa11.21□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Pcdhb22Q91XZ8 794 aa11.21□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Rbm33Q9CXK9 1231 aaKnown RBP11.21□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Nrxn3Q6P9K9 1571 aa11.21□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Col15a1O35206 1367 aa11.21□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Ccdc157Q5SPX1 718 aa11.21□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Rassf2Q8BMS9 326 aa11.21□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Ttc12Q8BW49 704 aa11.21□□□□□ -0.61
Ldlr-201ENSMUST00000034713 SfpqQ8VIJ6 699 aaKnown RBP11.21□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Tmod2Q9JKK7 351 aa11.21□□□□□ -0.61
Ldlr-201ENSMUST00000034713 Kiaa0319Q5SZV5 1081 aa11.21□□□□□ -0.62
Ldlr-201ENSMUST00000034713 RalylQ8BTF8 293 aa11.21□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Gramd4Q8CB44 633 aa11.21□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Tmem132aQ922P8 1018 aa11.21□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Elf2Q9JHC9 593 aa11.21□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Dhx38Q80X98 1228 aa11.21□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Shtn1Q8K2Q9 631 aa11.21□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Olr1Q9EQ09 363 aa11.21□□□□□ -0.62
Ldlr-201ENSMUST00000034713 DccP70211 1447 aa11.21□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Anxa1P10107 346 aaKnown RBP11.2□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Stmn4P63042 189 aa11.2□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Sgsm2Q80U12 1005 aa11.2□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Ptcd1Q8C2E4 695 aaKnown RBP11.2□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Exoc1Q8R3S6 894 aa11.2□□□□□ -0.62
Ldlr-201ENSMUST00000034713 NapgQ9CWZ7 312 aa11.2□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Ehd4Q9EQP2 541 aa11.2□□□□□ -0.62
Ldlr-201ENSMUST00000034713 MeiocA2AG06 965 aa11.2□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Atp6v1aP50516 617 aaKnown RBP11.2□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Senp1P59110 640 aa11.2□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Ncf1Q09014 390 aa11.2□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Gbp8Q2V6D6 525 aa11.2□□□□□ -0.62
Ldlr-201ENSMUST00000034713 DlatQ8BMF4 642 aa11.2□□□□□ -0.62
Ldlr-201ENSMUST00000034713 Rtn1Q8K0T0 780 aa11.2□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms