RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Col17a1Q07563 1470 aa18.75■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Kiaa1551Q5DTW7 1521 aa18.75■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Cep19Q9CQA8 163 aa18.75■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Nfxl1E9Q8I7 918 aaKnown RBP18.75■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Trim28Q62318 834 aa18.75■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Cyp4f39Q8BGU0 532 aa18.75■□□□□ 0.59
Col17a1-201ENSMUST00000026045 HhatQ8BMT9 499 aa18.75■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Xpo4Q9ESJ0 1151 aa18.75■□□□□ 0.59
Col17a1-201ENSMUST00000026045 ChkbO55229 394 aa18.74■□□□□ 0.59
Col17a1-201ENSMUST00000026045 RcvrnP34057 202 aa18.74■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Ica1lQ3TY65 431 aa18.74■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Utp18Q5SSI6 552 aaKnown RBP18.74■□□□□ 0.59
Col17a1-201ENSMUST00000026045 LratQ9JI60 231 aa18.74■□□□□ 0.59
Col17a1-201ENSMUST00000026045 NpatQ8BMA5 1420 aa18.74■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Plxnc1Q9QZC2 1574 aa18.74■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Zscan22Q8BGS5 496 aa18.74■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Rdm1Q9CQK3 281 aa18.74■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Mcur1Q9CXD6 340 aa18.74■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Mknk2Q8CDB0 459 aa18.74■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Cep83Q9D5R3 692 aa18.74■□□□□ 0.59
Col17a1-201ENSMUST00000026045 WtapQ9ER69 396 aa18.74■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Api5O35841 504 aaKnown RBP18.74■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Idi1P58044 227 aa18.74■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Ccdc91Q9D8L5 442 aa18.74■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Kif1bQ60575 1816 aaKnown RBP18.74■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Ess2O70279 479 aa18.74■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Gas8Q60779 478 aa18.74■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Slc14a2Q8R4T9 930 aa18.74■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Ppfia4B8QI36 1187 aa18.73■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Ercc5P35689 1170 aa18.73■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Arhgap24Q8C4V1 747 aa18.73■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Sf3a3Q9D554 501 aaKnown RBP18.73■□□□□ 0.59
Col17a1-201ENSMUST00000026045 ErmapQ9JLN5 566 aa18.73■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Asic3Q6X1Y6 530 aa18.73■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Ophn1Q99J31 802 aa18.73■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Arhgap4B1AUY3 965 aa18.73■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Vps37dQ810I0 261 aa18.73■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Prune1Q8BIW1 454 aa18.73■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Triml1Q8BVP1 470 aa18.73■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Psmd6Q99JI4 389 aa18.73■□□□□ 0.59
Col17a1-201ENSMUST00000026045 PzpQ61838 1495 aa18.73■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Kmt5bQ3U8K7 883 aa18.72■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Vil1Q62468 827 aa18.72■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Recql4Q75NR7 1216 aaKnown RBP18.72■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Q8BZJ8 459 aa18.72■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Bmp2kQ91Z96 1138 aa18.72■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Slc4a4O88343 1079 aa18.72■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Lmbrd2Q8C561 694 aa18.72■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Zmat2Q9CPW7 199 aa18.72■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Rrp1P56183 494 aaKnown RBP18.72■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Ttc27Q8CD92 847 aa18.72■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Tacc3Q9JJ11 631 aa18.72■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Sclt1G5E861 688 aa18.72■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Zc3h12cQ5DTV4 884 aa18.72■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Ddx10Q80Y44 875 aaKnown RBP18.72■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Ccdc89Q9DA73 370 aa18.72■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Kifc2O08672 792 aa18.71■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Plcd1Q8R3B1 756 aa18.71■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Dot1lQ6XZL8 1540 aa18.71■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Becn2P0DM65 447 aa18.71■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Irx2P81066 474 aa18.71■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Gimap5Q8BWF2 308 aa18.71■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Pak2Q8CIN4 524 aa18.71■□□□□ 0.59
Col17a1-201ENSMUST00000026045 RarsQ9D0I9 660 aaKnown RBP18.71■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Taok3Q8BYC6 898 aa18.71■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Zfp213E9QAW0 468 aa18.71■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Uhrf1bp1lA2RSJ4 1457 aa18.71■□□□□ 0.59
Col17a1-201ENSMUST00000026045 Rnf40Q3U319 1001 aa18.71■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Znf532Q6NXK2 1036 aa18.71■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Atp12aQ9Z1W8 1035 aa18.71■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Gm7347D3YYI9 267 aa18.7■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Gm10378F6XQQ1 160 aa18.7■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Nek5Q7TSC3 627 aa18.7■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Hgh1Q8C3I8 393 aa18.7■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Psmd2Q8VDM4 908 aa18.7■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Mrps25Q9D125 171 aaKnown RBP18.7■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Ifi35Q9D8C4 286 aa18.7■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Clip2Q9Z0H8 1047 aa18.7■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Fhod3Q76LL6 1578 aa18.7■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Dmrt2Q8BG36 561 aa18.7■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Cul7Q8VE73 1689 aa18.7■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Zfp42P22227 288 aa18.7■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Ccdc40Q8BI79 1192 aa18.7■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Edc3Q8K2D3 508 aaKnown RBP18.7■□□□□ 0.58
Col17a1-201ENSMUST00000026045 HgsQ99LI8 775 aa18.7■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Tbc1d8bA3KGB4 1114 aa18.7■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Spg7Q3ULF4 781 aa18.7■□□□□ 0.58
Col17a1-201ENSMUST00000026045 AticQ9CWJ9 592 aaKnown RBP18.7■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Znf287Q9EQB9 759 aa18.7■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Fam186bD3Z420 943 aa18.69■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Timm10P62073 90 aa18.69■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Cog7Q3UM29 770 aa18.69■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Nrbp1Q99J45 535 aa18.69■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Pik3ap1Q9EQ32 811 aa18.69■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Kif14L0N7N1 1674 aaKnown RBP18.69■□□□□ 0.58
Col17a1-201ENSMUST00000026045 CrklP47941 303 aa18.69■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Ccdc82Q6PG04 518 aa18.69■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Tmem143Q8VD26 458 aa18.69■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Ubash3aQ3V3E1 624 aa18.69■□□□□ 0.58
Col17a1-201ENSMUST00000026045 Naa30Q8CES0 364 aa18.69■□□□□ 0.58
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms