RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Acap3Q6NXL5 833 aa12.41□□□□□ -0.42
Msh3-201ENSMUST00000022220 Ranbp6Q8BIV3 1105 aa12.41□□□□□ -0.42
Msh3-201ENSMUST00000022220 BbxQ8VBW5 907 aa12.41□□□□□ -0.42
Msh3-201ENSMUST00000022220 ParnQ8VDG3 624 aa12.41□□□□□ -0.42
Msh3-201ENSMUST00000022220 Mrpl12Q9DB15 201 aaKnown RBP12.41□□□□□ -0.42
Msh3-201ENSMUST00000022220 Lonp2Q9DBN5 852 aa12.41□□□□□ -0.42
Msh3-201ENSMUST00000022220 Golga5Q9QYE6 729 aa12.41□□□□□ -0.42
Msh3-201ENSMUST00000022220 Plbd2Q3TCN2 594 aa12.41□□□□□ -0.42
Msh3-201ENSMUST00000022220 Leo1Q5XJE5 667 aa12.41□□□□□ -0.42
Msh3-201ENSMUST00000022220 Nxf7Q80SZ6 620 aaKnown RBP12.41□□□□□ -0.42
Msh3-201ENSMUST00000022220 Rtn1Q8K0T0 780 aa12.41□□□□□ -0.42
Msh3-201ENSMUST00000022220 Ccdc7Q9D541 371 aa12.41□□□□□ -0.42
Msh3-201ENSMUST00000022220 2310002L09RikQ9D7L5 217 aa12.41□□□□□ -0.42
Msh3-201ENSMUST00000022220 Gm30191A0A0U1RNT7 187 aa12.41□□□□□ -0.42
Msh3-201ENSMUST00000022220 Prr16A3KMN5 304 aa12.41□□□□□ -0.42
Msh3-201ENSMUST00000022220 Prl3d1P18121 224 aa12.41□□□□□ -0.42
Msh3-201ENSMUST00000022220 Traf3ip1Q149C2 625 aa12.41□□□□□ -0.42
Msh3-201ENSMUST00000022220 Erich4Q3UNU4 136 aa12.41□□□□□ -0.42
Msh3-201ENSMUST00000022220 Tshz1Q5DTH5 1084 aa12.41□□□□□ -0.42
Msh3-201ENSMUST00000022220 Arid3aQ62431 601 aa12.41□□□□□ -0.42
Msh3-201ENSMUST00000022220 Def6Q8C2K1 630 aa12.41□□□□□ -0.42
Msh3-201ENSMUST00000022220 IcoslgQ9JHJ8 322 aa12.41□□□□□ -0.42
Msh3-201ENSMUST00000022220 Map3k12Q60700 888 aa12.4□□□□□ -0.42
Msh3-201ENSMUST00000022220 Kcnj14Q8JZN3 434 aa12.4□□□□□ -0.42
Msh3-201ENSMUST00000022220 Trip6Q9Z1Y4 480 aa12.4□□□□□ -0.42
Msh3-201ENSMUST00000022220 Zfp804bA0A0G2JGH6 1343 aa12.4□□□□□ -0.42
Msh3-201ENSMUST00000022220 Lamb3Q61087 1168 aa12.4□□□□□ -0.42
Msh3-201ENSMUST00000022220 Mtmr3Q8K296 1196 aa12.4□□□□□ -0.42
Msh3-201ENSMUST00000022220 Gm3409A0A0G2JE67 319 aa12.4□□□□□ -0.43
Msh3-201ENSMUST00000022220 Akr1c19G3X9Y6 323 aa12.4□□□□□ -0.43
Msh3-201ENSMUST00000022220 Gng11P61953 73 aa12.4□□□□□ -0.43
Msh3-201ENSMUST00000022220 Zcrb1Q9CZ96 217 aaKnown RBP12.4□□□□□ -0.43
Msh3-201ENSMUST00000022220 Osbpl5Q9ER64 874 aa12.4□□□□□ -0.43
Msh3-201ENSMUST00000022220 Clip2Q9Z0H8 1047 aa12.4□□□□□ -0.43
Msh3-201ENSMUST00000022220 Cdk5rap2Q8K389 1822 aa12.39□□□□□ -0.43
Msh3-201ENSMUST00000022220 A0A1W2P7S8 802 aa12.39□□□□□ -0.43
Msh3-201ENSMUST00000022220 Sptlc2P97363 560 aaKnown RBP12.39□□□□□ -0.43
Msh3-201ENSMUST00000022220 Hspa4Q61316 841 aa12.39□□□□□ -0.43
Msh3-201ENSMUST00000022220 Cdc5lQ6A068 802 aaKnown RBP12.39□□□□□ -0.43
Msh3-201ENSMUST00000022220 Ift74Q8BKE9 600 aa12.39□□□□□ -0.43
Msh3-201ENSMUST00000022220 Ppm1mQ8BU27 406 aa12.39□□□□□ -0.43
Msh3-201ENSMUST00000022220 Hps4Q99KG7 671 aa12.39□□□□□ -0.43
Msh3-201ENSMUST00000022220 Ccdc83Q9D4V3 305 aa12.39□□□□□ -0.43
Msh3-201ENSMUST00000022220 Tbc1d8bA3KGB4 1114 aa12.39□□□□□ -0.43
Msh3-201ENSMUST00000022220 Celf1P28659 486 aaKnown RBP12.39□□□□□ -0.43
Msh3-201ENSMUST00000022220 Cnnm2Q3TWN3 875 aa12.39□□□□□ -0.43
Msh3-201ENSMUST00000022220 Igf2bp2Q5SF07 592 aaKnown RBP12.39□□□□□ -0.43
Msh3-201ENSMUST00000022220 Txndc16Q7TN22 820 aa12.39□□□□□ -0.43
Msh3-201ENSMUST00000022220 Plcd1Q8R3B1 756 aa12.39□□□□□ -0.43
Msh3-201ENSMUST00000022220 Smc1bQ920F6 1248 aa12.39□□□□□ -0.43
Msh3-201ENSMUST00000022220 Acot9Q9R0X4 439 aaKnown RBP12.39□□□□□ -0.43
Msh3-201ENSMUST00000022220 Nfil3O08750 462 aa12.39□□□□□ -0.43
Msh3-201ENSMUST00000022220 Dapk3O54784 448 aa12.39□□□□□ -0.43
Msh3-201ENSMUST00000022220 Lrrcc1Q69ZB0 1026 aa12.39□□□□□ -0.43
Msh3-201ENSMUST00000022220 Vps37dQ810I0 261 aa12.39□□□□□ -0.43
Msh3-201ENSMUST00000022220 Tango6Q8C3S2 1079 aa12.39□□□□□ -0.43
Msh3-201ENSMUST00000022220 Ccdc150Q8CDI7 1110 aa12.39□□□□□ -0.43
Msh3-201ENSMUST00000022220 Ubac1Q8VDI7 409 aa12.39□□□□□ -0.43
Msh3-201ENSMUST00000022220 StrbpQ91WM1 672 aaKnown RBP12.39□□□□□ -0.43
Msh3-201ENSMUST00000022220 Adamts7Q68SA9 1657 aa12.38□□□□□ -0.43
Msh3-201ENSMUST00000022220 Ino80Q6ZPV2 1559 aa12.38□□□□□ -0.43
Msh3-201ENSMUST00000022220 Sdc2P43407 202 aa12.38□□□□□ -0.43
Msh3-201ENSMUST00000022220 Tbc1d5Q80XQ2 815 aa12.38□□□□□ -0.43
Msh3-201ENSMUST00000022220 Sptlc3Q8BG54 563 aa12.38□□□□□ -0.43
Msh3-201ENSMUST00000022220 Nwd1A6H603 1563 aa12.38□□□□□ -0.43
Msh3-201ENSMUST00000022220 Lmbr1Q9JIT0 490 aa12.38□□□□□ -0.43
Msh3-201ENSMUST00000022220 Gdf11Q9Z1W4 405 aa12.38□□□□□ -0.43
Msh3-201ENSMUST00000022220 AdgbG3UZ78 1657 aa12.38□□□□□ -0.43
Msh3-201ENSMUST00000022220 Dnaaf2Q8BPI1 814 aa12.38□□□□□ -0.43
Msh3-201ENSMUST00000022220 Kcnk13Q8R1P5 405 aa12.38□□□□□ -0.43
Msh3-201ENSMUST00000022220 Mylk2Q8VCR8 613 aa12.38□□□□□ -0.43
Msh3-201ENSMUST00000022220 Pcdhb5Q91XZ5 792 aa12.38□□□□□ -0.43
Msh3-201ENSMUST00000022220 Tfcp2Q9ERA0 502 aa12.38□□□□□ -0.43
Msh3-201ENSMUST00000022220 Atp8b3Q6UQ17 1335 aa12.38□□□□□ -0.43
Msh3-201ENSMUST00000022220 Cps1Q8C196 1500 aa12.37□□□□□ -0.43
Msh3-201ENSMUST00000022220 Ess2O70279 479 aa12.37□□□□□ -0.43
Msh3-201ENSMUST00000022220 Rad23bP54728 416 aa12.37□□□□□ -0.43
Msh3-201ENSMUST00000022220 Dynll1P63168 89 aa12.37□□□□□ -0.43
Msh3-201ENSMUST00000022220 Tpcn2Q8BWC0 731 aa12.37□□□□□ -0.43
Msh3-201ENSMUST00000022220 Ipo7Q9EPL8 1038 aaKnown RBP12.37□□□□□ -0.43
Msh3-201ENSMUST00000022220 Pcdhb9E9Q5G2 828 aa12.37□□□□□ -0.43
Msh3-201ENSMUST00000022220 Ncf1Q09014 390 aa12.37□□□□□ -0.43
Msh3-201ENSMUST00000022220 Sun3Q5SS91 320 aa12.37□□□□□ -0.43
Msh3-201ENSMUST00000022220 Exoc8Q6PGF7 716 aa12.37□□□□□ -0.43
Msh3-201ENSMUST00000022220 Ulbp1Q8HWA3 334 aa12.37□□□□□ -0.43
Msh3-201ENSMUST00000022220 Stn1Q8K2X3 378 aa12.37□□□□□ -0.43
Msh3-201ENSMUST00000022220 Ttc5Q99LG4 440 aa12.37□□□□□ -0.43
Msh3-201ENSMUST00000022220 Lipo1J3QME6 396 aa12.37□□□□□ -0.43
Msh3-201ENSMUST00000022220 Cyp19a1P28649 503 aa12.37□□□□□ -0.43
Msh3-201ENSMUST00000022220 DpydQ8CHR6 1025 aa12.37□□□□□ -0.43
Msh3-201ENSMUST00000022220 Gtf2iQ9ESZ8 998 aaKnown RBP12.37□□□□□ -0.43
Msh3-201ENSMUST00000022220 Gja10Q9WUS4 505 aa12.37□□□□□ -0.43
Msh3-201ENSMUST00000022220 Gm4340L7N2C4 268 aa12.36□□□□□ -0.43
Msh3-201ENSMUST00000022220 Cdk4P30285 303 aa12.36□□□□□ -0.43
Msh3-201ENSMUST00000022220 Hip1rQ9JKY5 1068 aa12.36□□□□□ -0.43
Msh3-201ENSMUST00000022220 Prr29B1ARI9 187 aa12.36□□□□□ -0.43
Msh3-201ENSMUST00000022220 Csrnp1P59054 583 aa12.36□□□□□ -0.43
Msh3-201ENSMUST00000022220 Pcdhb22Q91XZ8 794 aa12.36□□□□□ -0.43
Msh3-201ENSMUST00000022220 Zcchc17Q9ESX4 241 aaKnown RBP12.36□□□□□ -0.43
Msh3-201ENSMUST00000022220 Cyp2ab1S4R196 498 aa12.36□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 13 ms