RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Cyp19a1P28649 503 aa18.64■□□□□ 0.57
Trim28-201ENSMUST00000005705 Atad2Q8CDM1 1040 aa18.64■□□□□ 0.57
Trim28-201ENSMUST00000005705 Pold4Q9CWP8 107 aa18.64■□□□□ 0.57
Trim28-201ENSMUST00000005705 Etnk1Q9D4V0 363 aa18.64■□□□□ 0.57
Trim28-201ENSMUST00000005705 Vnn1Q9Z0K8 512 aa18.64■□□□□ 0.57
Trim28-201ENSMUST00000005705 Col18a1P39061 1774 aa18.64■□□□□ 0.57
Trim28-201ENSMUST00000005705 Ttll12Q3UDE2 639 aa18.64■□□□□ 0.57
Trim28-201ENSMUST00000005705 Tpcn2Q8BWC0 731 aa18.64■□□□□ 0.57
Trim28-201ENSMUST00000005705 Mei1Q9D4I2 1268 aa18.64■□□□□ 0.57
Trim28-201ENSMUST00000005705 Prl3d2F6R3P9 224 aa18.63■□□□□ 0.57
Trim28-201ENSMUST00000005705 NapbP28663 298 aa18.63■□□□□ 0.57
Trim28-201ENSMUST00000005705 Phlpp1Q8CHE4 1687 aa18.63■□□□□ 0.57
Trim28-201ENSMUST00000005705 Wnk3Q80XP9 1757 aa18.63■□□□□ 0.57
Trim28-201ENSMUST00000005705 AW822073A0A0N4SUK1 652 aa18.63■□□□□ 0.57
Trim28-201ENSMUST00000005705 Cdhr2E9Q7P9 1308 aa18.63■□□□□ 0.57
Trim28-201ENSMUST00000005705 SfswapQ3USH5 945 aaKnown RBP18.62■□□□□ 0.57
Trim28-201ENSMUST00000005705 Brinp3Q499E0 766 aa18.62■□□□□ 0.57
Trim28-201ENSMUST00000005705 Zswim4Q8C7B8 1101 aa18.62■□□□□ 0.57
Trim28-201ENSMUST00000005705 Ulbp1Q8HWA3 334 aa18.62■□□□□ 0.57
Trim28-201ENSMUST00000005705 Cyp2j7A0A140T8U1 504 aa18.62■□□□□ 0.57
Trim28-201ENSMUST00000005705 Ms4a1P19437 291 aa18.62■□□□□ 0.57
Trim28-201ENSMUST00000005705 Gabpb2P81069 414 aa18.62■□□□□ 0.57
Trim28-201ENSMUST00000005705 Clca2Q8BG22 942 aa18.62■□□□□ 0.57
Trim28-201ENSMUST00000005705 Cadps2Q8BYR5 1297 aa18.62■□□□□ 0.57
Trim28-201ENSMUST00000005705 Cdc45Q9Z1X9 566 aa18.62■□□□□ 0.57
Trim28-201ENSMUST00000005705 Cyp3a57D3YYZ0 503 aa18.61■□□□□ 0.57
Trim28-201ENSMUST00000005705 Gng11P61953 73 aa18.61■□□□□ 0.57
Trim28-201ENSMUST00000005705 Epha2Q03145 977 aa18.61■□□□□ 0.57
Trim28-201ENSMUST00000005705 Prl2c1Q5SVL9 228 aa18.61■□□□□ 0.57
Trim28-201ENSMUST00000005705 Trak2Q6P9N8 913 aa18.61■□□□□ 0.57
Trim28-201ENSMUST00000005705 Zc3h6Q8BYK8 1177 aa18.61■□□□□ 0.57
Trim28-201ENSMUST00000005705 Cdc27A2A6Q5 825 aa18.61■□□□□ 0.57
Trim28-201ENSMUST00000005705 Tubgcp2Q921G8 905 aa18.61■□□□□ 0.57
Trim28-201ENSMUST00000005705 Vps33aQ9D2N9 598 aa18.61■□□□□ 0.57
Trim28-201ENSMUST00000005705 Jakmip2D3YXK0 820 aa18.61■□□□□ 0.57
Trim28-201ENSMUST00000005705 Pcdhb9E9Q5G2 828 aa18.61■□□□□ 0.57
Trim28-201ENSMUST00000005705 Ovgp1Q62010 721 aa18.61■□□□□ 0.57
Trim28-201ENSMUST00000005705 Tmem266Q8BZB3 538 aa18.61■□□□□ 0.57
Trim28-201ENSMUST00000005705 Srek1Q8BZX4 494 aaKnown RBP18.61■□□□□ 0.57
Trim28-201ENSMUST00000005705 Fam76aQ922G2 307 aa18.61■□□□□ 0.57
Trim28-201ENSMUST00000005705 Grin2dQ03391 1323 aa18.6■□□□□ 0.57
Trim28-201ENSMUST00000005705 Pard3Q99NH2 1333 aa18.6■□□□□ 0.57
Trim28-201ENSMUST00000005705 Bag1Q60739 355 aa18.6■□□□□ 0.57
Trim28-201ENSMUST00000005705 Maats1Q8BRC6 783 aa18.6■□□□□ 0.57
Trim28-201ENSMUST00000005705 Nop2Q922K7 793 aaKnown RBP18.6■□□□□ 0.57
Trim28-201ENSMUST00000005705 Polr2dQ9D7M8 142 aaKnown RBP18.6■□□□□ 0.57
Trim28-201ENSMUST00000005705 Prss40A6H6T1 365 aa18.6■□□□□ 0.57
Trim28-201ENSMUST00000005705 Dapk3O54784 448 aa18.6■□□□□ 0.57
Trim28-201ENSMUST00000005705 TbcaP48428 108 aaKnown RBP18.6■□□□□ 0.57
Trim28-201ENSMUST00000005705 Lamb3Q61087 1168 aa18.6■□□□□ 0.57
Trim28-201ENSMUST00000005705 ZyxQ62523 564 aa18.6■□□□□ 0.57
Trim28-201ENSMUST00000005705 Trim59Q922Y2 403 aa18.6■□□□□ 0.57
Trim28-201ENSMUST00000005705 Rdm1Q9CQK3 281 aa18.6■□□□□ 0.57
Trim28-201ENSMUST00000005705 Appbp2Q9DAX9 585 aa18.6■□□□□ 0.57
Trim28-201ENSMUST00000005705 Btn2a2A4QPC6 514 aa18.59■□□□□ 0.57
Trim28-201ENSMUST00000005705 Pde4bB1AWC9 736 aa18.59■□□□□ 0.57
Trim28-201ENSMUST00000005705 Madcam1Q61826 405 aa18.59■□□□□ 0.57
Trim28-201ENSMUST00000005705 Krt39Q6IFX4 482 aa18.59■□□□□ 0.57
Trim28-201ENSMUST00000005705 Etf1Q8BWY3 437 aaKnown RBP18.59■□□□□ 0.57
Trim28-201ENSMUST00000005705 Ubr2Q6WKZ8 1755 aa18.59■□□□□ 0.57
Trim28-201ENSMUST00000005705 Abca15E9PWH4 1668 aa18.59■□□□□ 0.57
Trim28-201ENSMUST00000005705 Prr29B1ARI9 187 aa18.59■□□□□ 0.57
Trim28-201ENSMUST00000005705 Capn2O08529 700 aa18.59■□□□□ 0.57
Trim28-201ENSMUST00000005705 Ufl1Q8CCJ3 793 aaKnown RBP18.59■□□□□ 0.57
Trim28-201ENSMUST00000005705 AatfQ9JKX4 526 aaKnown RBP18.59■□□□□ 0.57
Trim28-201ENSMUST00000005705 Abtb2Q7TQI7 1024 aa18.59■□□□□ 0.57
Trim28-201ENSMUST00000005705 Ncaph2Q8BSP2 607 aa18.59■□□□□ 0.57
Trim28-201ENSMUST00000005705 Spata32Q8C5V0 334 aa18.59■□□□□ 0.57
Trim28-201ENSMUST00000005705 Hip1rQ9JKY5 1068 aa18.59■□□□□ 0.57
Trim28-201ENSMUST00000005705 Map7d2A2AG50 781 aa18.58■□□□□ 0.57
Trim28-201ENSMUST00000005705 Gm20425E9Q035 978 aaKnown RBP18.58■□□□□ 0.57
Trim28-201ENSMUST00000005705 GmnnO88513 206 aa18.58■□□□□ 0.57
Trim28-201ENSMUST00000005705 SrprbP47758 269 aa18.58■□□□□ 0.57
Trim28-201ENSMUST00000005705 Ints4Q8CIM8 964 aa18.58■□□□□ 0.57
Trim28-201ENSMUST00000005705 Rbm43Q99J64 343 aa18.58■□□□□ 0.57
Trim28-201ENSMUST00000005705 Cyp2c23E9Q5K4 494 aa18.58■□□□□ 0.56
Trim28-201ENSMUST00000005705 Zfp597E9Q6S0 419 aa18.58■□□□□ 0.56
Trim28-201ENSMUST00000005705 Slc4a4O88343 1079 aa18.58■□□□□ 0.56
Trim28-201ENSMUST00000005705 Kif2aP28740 705 aa18.58■□□□□ 0.56
Trim28-201ENSMUST00000005705 Haus7Q8BKT8 364 aa18.58■□□□□ 0.56
Trim28-201ENSMUST00000005705 Iqca1Q9CUL5 857 aa18.58■□□□□ 0.56
Trim28-201ENSMUST00000005705 Creld2Q9CYA0 350 aa18.58■□□□□ 0.56
Trim28-201ENSMUST00000005705 Naa16Q9DBB4 864 aa18.58■□□□□ 0.56
Trim28-201ENSMUST00000005705 Pald1P70261 859 aa18.57■□□□□ 0.56
Trim28-201ENSMUST00000005705 Slf2Q6P9P0 1278 aa18.57■□□□□ 0.56
Trim28-201ENSMUST00000005705 Bsdc1Q80Y55 427 aa18.57■□□□□ 0.56
Trim28-201ENSMUST00000005705 Fam102bQ8BQS4 339 aa18.57■□□□□ 0.56
Trim28-201ENSMUST00000005705 ZgpatQ8VDM1 511 aa18.57■□□□□ 0.56
Trim28-201ENSMUST00000005705 Scn4aQ9ER60 1841 aa18.57■□□□□ 0.56
Trim28-201ENSMUST00000005705 Ranbp6Q8BIV3 1105 aa18.57■□□□□ 0.56
Trim28-201ENSMUST00000005705 Phf20l1Q8CCJ9 1013 aa18.57■□□□□ 0.56
Trim28-201ENSMUST00000005705 Q8CEZ4 452 aa18.57■□□□□ 0.56
Trim28-201ENSMUST00000005705 BbxQ8VBW5 907 aa18.57■□□□□ 0.56
Trim28-201ENSMUST00000005705 ChmQ9QXG2 665 aa18.57■□□□□ 0.56
Trim28-201ENSMUST00000005705 Atp1a2Q6PIE5 1020 aa18.57■□□□□ 0.56
Trim28-201ENSMUST00000005705 Ccp110Q7TSH4 1004 aa18.57■□□□□ 0.56
Trim28-201ENSMUST00000005705 Klhl30Q8C3F7 581 aa18.57■□□□□ 0.56
Trim28-201ENSMUST00000005705 Sos2Q02384 1333 aa18.57■□□□□ 0.56
Trim28-201ENSMUST00000005705 Gm3409A0A0G2JE67 319 aa18.56■□□□□ 0.56
Trim28-201ENSMUST00000005705 Islr2Q5RKR3 745 aa18.56■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 18.8 ms