RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 Dnajc2P54103 621 aaKnown RBP13.78□□□□□ -0.2
Rfx1-201ENSMUST00000005600 Card10P58660 1021 aa13.78□□□□□ -0.2
Rfx1-201ENSMUST00000005600 Ankrd40Q5SUE8 363 aa13.78□□□□□ -0.2
Rfx1-201ENSMUST00000005600 Ncoa7Q6DFV7 943 aa13.78□□□□□ -0.2
Rfx1-201ENSMUST00000005600 Krt39Q6IFX4 482 aa13.78□□□□□ -0.2
Rfx1-201ENSMUST00000005600 Ssfa2Q922B9 1252 aa13.78□□□□□ -0.2
Rfx1-201ENSMUST00000005600 Lonp2Q9DBN5 852 aa13.78□□□□□ -0.2
Rfx1-201ENSMUST00000005600 Lipo1J3QME6 396 aa13.78□□□□□ -0.2
Rfx1-201ENSMUST00000005600 Sdc2P43407 202 aa13.78□□□□□ -0.2
Rfx1-201ENSMUST00000005600 Larp6Q8BN59 492 aa13.78□□□□□ -0.2
Rfx1-201ENSMUST00000005600 Kcnq3Q8K3F6 873 aa13.78□□□□□ -0.2
Rfx1-201ENSMUST00000005600 SelenooQ9DBC0 667 aa13.78□□□□□ -0.2
Rfx1-201ENSMUST00000005600 Ltb4r2Q9JJL9 360 aa13.78□□□□□ -0.2
Rfx1-201ENSMUST00000005600 AK157302I3ITR1 129 aa13.78□□□□□ -0.2
Rfx1-201ENSMUST00000005600 Zkscan8Q8BSL0 588 aa13.78□□□□□ -0.2
Rfx1-201ENSMUST00000005600 Smc2Q8CG48 1191 aaKnown RBP13.78□□□□□ -0.2
Rfx1-201ENSMUST00000005600 Cd209bQ8CJ91 325 aa13.78□□□□□ -0.2
Rfx1-201ENSMUST00000005600 Pcdhgc5Q91XW9 944 aa13.78□□□□□ -0.2
Rfx1-201ENSMUST00000005600 Isca1Q9D924 129 aa13.78□□□□□ -0.2
Rfx1-201ENSMUST00000005600 Ehd4Q9EQP2 541 aa13.78□□□□□ -0.2
Rfx1-201ENSMUST00000005600 Lmtk3Q5XJV6 1424 aa13.77□□□□□ -0.2
Rfx1-201ENSMUST00000005600 Epb41l2O70318 988 aaKnown RBP13.77□□□□□ -0.2
Rfx1-201ENSMUST00000005600 Agtpbp1Q641K1 1218 aa13.77□□□□□ -0.2
Rfx1-201ENSMUST00000005600 Wasf1Q8R5H6 559 aa13.77□□□□□ -0.2
Rfx1-201ENSMUST00000005600 Vnn1Q9Z0K8 512 aa13.77□□□□□ -0.2
Rfx1-201ENSMUST00000005600 Rtel1Q0VGM9 1203 aa13.77□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Gtf2f1Q3THK3 508 aaKnown RBP13.77□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Riok1Q922Q2 567 aa13.77□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Desi2Q9D291 194 aa13.77□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Rimbp3Q3V0F0 1606 aa13.77□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Myl10Q62082 202 aa13.77□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Ift122Q6NWV3 1182 aa13.77□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Zmynd15Q8C0R7 736 aa13.77□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Topaz1E5FYH1 1653 aa13.77□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Gcom1E9PZ54 550 aa13.76□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Ftl2P49945 183 aa13.76□□□□□ -0.21
Rfx1-201ENSMUST00000005600 MyzapQ3UIJ9 466 aa13.76□□□□□ -0.21
Rfx1-201ENSMUST00000005600 AW822073A0A0N4SUK1 652 aa13.76□□□□□ -0.21
Rfx1-201ENSMUST00000005600 CrcpO35427 148 aa13.76□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Anxa1P10107 346 aaKnown RBP13.76□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Map10Q8BJS7 891 aa13.76□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Plekhd1B2RPU2 505 aa13.76□□□□□ -0.21
Rfx1-201ENSMUST00000005600 ItpripQ3TNL8 555 aa13.76□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Fam170aQ66LM6 333 aa13.76□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Gnl3lQ6PGG6 577 aaKnown RBP13.76□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Haus7Q8BKT8 364 aa13.76□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Tns2Q8CGB6 1400 aa13.76□□□□□ -0.21
Rfx1-201ENSMUST00000005600 GptQ8QZR5 496 aa13.76□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Polr2dQ9D7M8 142 aaKnown RBP13.76□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Lcmt1A0A0U1RNF2 332 aa13.75□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Epha2Q03145 977 aa13.75□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Prkag3Q8BGM7 489 aa13.75□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Smc1aQ9CU62 1233 aaKnown RBP13.75□□□□□ -0.21
Rfx1-201ENSMUST00000005600 CpdO89001 1377 aa13.75□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Tjp1P39447 1745 aaKnown RBP13.75□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Gm3409A0A0G2JE67 319 aa13.75□□□□□ -0.21
Rfx1-201ENSMUST00000005600 SsbP32067 415 aaKnown RBP13.75□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Acap3Q6NXL5 833 aa13.75□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Iqca1Q9CUL5 857 aa13.75□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Col22a1E9Q7P1 1613 aa13.75□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Siglec1Q62230 1695 aa13.75□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Pde4bB1AWC9 736 aa13.75□□□□□ -0.21
Rfx1-201ENSMUST00000005600 NapbP28663 298 aa13.75□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Kcna6Q61923 529 aa13.75□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Adck5Q80V03 582 aa13.75□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Shisa4Q8CA71 197 aa13.75□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Cbx6Q9DBY5 414 aa13.75□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Zranb2Q9R020 330 aaKnown RBP13.75□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Pde6aP27664 859 aa13.75□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Ccdc34Q3UI66 367 aa13.75□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Ctdspl2Q8BG15 465 aa13.75□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Ankk1Q8BZ25 745 aa13.75□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Slain2Q8CI08 581 aa13.75□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Vps16Q920Q4 839 aa13.75□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Emilin1Q99K41 1017 aa13.75□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Krt23Q99PS0 422 aa13.75□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Ccne2Q9Z238 404 aa13.75□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Dpf2Q61103 391 aaKnown RBP13.74□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Nlrp9aQ66X03 949 aa13.74□□□□□ -0.21
Rfx1-201ENSMUST00000005600 DonsonQ9QXP4 560 aa13.74□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Pcdhb9E9Q5G2 828 aa13.74□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Arhgef16Q3U5C8 713 aa13.74□□□□□ -0.21
Rfx1-201ENSMUST00000005600 9230110C19RikQ8CC70 267 aa13.74□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Cyp3a59D3Z2W7 503 aa13.74□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Pex1Q5BL07 1284 aa13.74□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Ovgp1Q62010 721 aa13.74□□□□□ -0.21
Rfx1-201ENSMUST00000005600 EcsitQ9QZH6 435 aa13.74□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Atp8a2P98200 1148 aa13.73□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Ift88Q61371 824 aa13.73□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Necab1Q8BG18 352 aa13.73□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Kcnj14Q8JZN3 434 aa13.73□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Phldb2Q8K1N2 1249 aa13.73□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Mast3Q3U214 1321 aa13.73□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Foxp1P58462 705 aa13.73□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Llgl2Q3TJ91 1027 aa13.73□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Ddx17Q501J6 650 aaKnown RBP13.73□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Lmod1Q8BVA4 595 aa13.73□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Gli3Q61602 1583 aa13.73□□□□□ -0.21
Rfx1-201ENSMUST00000005600 Cdc27A2A6Q5 825 aa13.73□□□□□ -0.21
Rfx1-201ENSMUST00000005600 CebpaP53566 359 aa13.73□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 24.9 ms