RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 MED13LQ71F56 2210 aa13.46□□□□□ -0.26
PHGDH-211ENST00000641213 IGHV2-70DA0A0C4DH43 119 aa13.46□□□□□ -0.26
PHGDH-211ENST00000641213 IZUMO1RA6ND01 250 aa13.46□□□□□ -0.26
PHGDH-211ENST00000641213 CRISP2P16562 243 aa13.46□□□□□ -0.26
PHGDH-211ENST00000641213 NDPQ00604 133 aa13.46□□□□□ -0.26
PHGDH-211ENST00000641213 IGLV11-55A0A075B6I3 123 aa13.45□□□□□ -0.26
PHGDH-211ENST00000641213 TOX4O94842 621 aa13.45□□□□□ -0.26
PHGDH-211ENST00000641213 TOMM40O96008 361 aa13.45□□□□□ -0.26
PHGDH-211ENST00000641213 MT-ND6P03923 174 aa13.45□□□□□ -0.26
PHGDH-211ENST00000641213 TCRAP04437 139 aa13.45□□□□□ -0.26
PHGDH-211ENST00000641213 COX19Q49B96 90 aa13.45□□□□□ -0.26
PHGDH-211ENST00000641213 PRR27Q6MZM9 219 aa13.45□□□□□ -0.26
PHGDH-211ENST00000641213 SMIM12Q96EX1 92 aa13.45□□□□□ -0.26
PHGDH-211ENST00000641213 GPR82Q96P67 336 aa13.45□□□□□ -0.26
PHGDH-211ENST00000641213 NAT8BQ9UHF3 227 aa13.45□□□□□ -0.26
PHGDH-211ENST00000641213 S4R3C0 116 aa13.45□□□□□ -0.26
PHGDH-211ENST00000641213 AMY1AP04745 511 aa13.44□□□□□ -0.26
PHGDH-211ENST00000641213 HIST1H1EP10412 219 aaKnown RBP13.44□□□□□ -0.26
PHGDH-211ENST00000641213 TMEM11P17152 192 aa13.44□□□□□ -0.26
PHGDH-211ENST00000641213 MRPL54Q6P161 138 aaKnown RBP13.44□□□□□ -0.26
PHGDH-211ENST00000641213 TTC9CQ8N5M4 171 aa13.44□□□□□ -0.26
PHGDH-211ENST00000641213 ZNF491Q8N8L2 437 aa13.44□□□□□ -0.26
PHGDH-211ENST00000641213 GRAMD2BQ96HH9 432 aa13.44□□□□□ -0.26
PHGDH-211ENST00000641213 FMC1Q96HJ9 113 aa13.44□□□□□ -0.26
PHGDH-211ENST00000641213 TMEM68Q96MH6 324 aa13.44□□□□□ -0.26
PHGDH-211ENST00000641213 SHANK2-AS3Q9BTD1 123 aa13.44□□□□□ -0.26
PHGDH-211ENST00000641213 MLST8Q9BVC4 326 aa13.44□□□□□ -0.26
PHGDH-211ENST00000641213 LINC00310P59036 64 aa13.44□□□□□ -0.26
PHGDH-211ENST00000641213 LMO4P61968 165 aa13.44□□□□□ -0.26
PHGDH-211ENST00000641213 TBX15Q96SF7 602 aa13.44□□□□□ -0.26
PHGDH-211ENST00000641213 OTORQ9NRC9 128 aa13.44□□□□□ -0.26
PHGDH-211ENST00000641213 H3BRN7 92 aa13.43□□□□□ -0.26
PHGDH-211ENST00000641213 C9orf152Q5JTZ5 239 aa13.43□□□□□ -0.26
PHGDH-211ENST00000641213 RNF125Q96EQ8 232 aa13.43□□□□□ -0.26
PHGDH-211ENST00000641213 AJUBAQ96IF1 538 aa13.43□□□□□ -0.26
PHGDH-211ENST00000641213 BPESC1Q9GZL8 116 aa13.43□□□□□ -0.26
PHGDH-211ENST00000641213 TBL2Q9Y4P3 447 aaKnown RBP13.43□□□□□ -0.26
PHGDH-211ENST00000641213 ASH1LQ9NR48 2969 aaKnown RBP13.43□□□□□ -0.26
PHGDH-211ENST00000641213 TRAV20A0A0B4J274 112 aa13.43□□□□□ -0.26
PHGDH-211ENST00000641213 WI2-2373I1.2A0A1W2PRP0 233 aa13.43□□□□□ -0.26
PHGDH-211ENST00000641213 GNG7O60262 68 aa13.43□□□□□ -0.26
PHGDH-211ENST00000641213 LTAP01374 205 aa13.43□□□□□ -0.26
PHGDH-211ENST00000641213 UBE2E1P51965 193 aa13.43□□□□□ -0.26
PHGDH-211ENST00000641213 RAB4BP61018 213 aa13.43□□□□□ -0.26
PHGDH-211ENST00000641213 Q0VG73 95 aa13.43□□□□□ -0.26
PHGDH-211ENST00000641213 CMTM2Q8TAZ6 248 aa13.43□□□□□ -0.26
PHGDH-211ENST00000641213 CHRDL1Q9BU40 450 aa13.43□□□□□ -0.26
PHGDH-211ENST00000641213 AKAP6Q13023 2319 aa13.42□□□□□ -0.26
PHGDH-211ENST00000641213 TRAV30A0A087WSZ9 112 aa13.42□□□□□ -0.26
PHGDH-211ENST00000641213 IL4P05112 153 aa13.42□□□□□ -0.26
PHGDH-211ENST00000641213 ESDP10768 282 aa13.42□□□□□ -0.26
PHGDH-211ENST00000641213 MFAP4P55083 255 aa13.42□□□□□ -0.26
PHGDH-211ENST00000641213 EXOC3-AS1Q8N2X6 119 aa13.42□□□□□ -0.26
PHGDH-211ENST00000641213 ZNF48Q96MX3 618 aaPredicted RBP13.42□□□□□ -0.26
PHGDH-211ENST00000641213 F8W735 103 aaPredicted RBP13.41□□□□□ -0.26
PHGDH-211ENST00000641213 OVOL3O00110 214 aa13.41□□□□□ -0.26
PHGDH-211ENST00000641213 SERF1AO75920 110 aa13.41□□□□□ -0.26
PHGDH-211ENST00000641213 HLA-DQA1P01909 254 aa13.41□□□□□ -0.26
PHGDH-211ENST00000641213 EGR2P11161 476 aaPredicted RBP13.41□□□□□ -0.26
PHGDH-211ENST00000641213 PKIAP61925 76 aa13.41□□□□□ -0.26
PHGDH-211ENST00000641213 USF2Q15853 346 aaPredicted RBP13.41□□□□□ -0.26
PHGDH-211ENST00000641213 FAM120AOSQ5T036 256 aa13.41□□□□□ -0.26
PHGDH-211ENST00000641213 BPIFA4PQ86YQ2 179 aa13.41□□□□□ -0.26
PHGDH-211ENST00000641213 NUP35Q8NFH5 326 aa13.41□□□□□ -0.26
PHGDH-211ENST00000641213 PKD1L2Q7Z442 2459 aa13.41□□□□□ -0.26
PHGDH-211ENST00000641213 IGHV7-81A0A0B4J1V7 117 aa13.41□□□□□ -0.26
PHGDH-211ENST00000641213 F2Z2F3 143 aa13.41□□□□□ -0.26
PHGDH-211ENST00000641213 KIAA1644Q3SXP7 199 aa13.41□□□□□ -0.26
PHGDH-211ENST00000641213 Q8N9W7 124 aa13.41□□□□□ -0.26
PHGDH-211ENST00000641213 TSKUQ8WUA8 353 aa13.41□□□□□ -0.26
PHGDH-211ENST00000641213 ZNF331Q9NQX6 463 aaPredicted RBP13.41□□□□□ -0.26
PHGDH-211ENST00000641213 TRBV19A0A075B6N1 114 aa13.4□□□□□ -0.26
PHGDH-211ENST00000641213 FAM106CPP0CH98 169 aa13.4□□□□□ -0.26
PHGDH-211ENST00000641213 IGLC2P0DOY2 106 aa13.4□□□□□ -0.26
PHGDH-211ENST00000641213 LINC00322Q6ZN03 302 aaPredicted RBP13.4□□□□□ -0.26
PHGDH-211ENST00000641213 BAGE3Q86Y29 109 aa13.4□□□□□ -0.26
PHGDH-211ENST00000641213 WIPF2Q8TF74 440 aaPredicted RBP13.4□□□□□ -0.26
PHGDH-211ENST00000641213 C17orf77Q96MU5 243 aa13.4□□□□□ -0.26
PHGDH-211ENST00000641213 PRO1933Q9H354 126 aa13.4□□□□□ -0.26
PHGDH-211ENST00000641213 GNB4Q9HAV0 340 aa13.4□□□□□ -0.26
PHGDH-211ENST00000641213 CSMD1Q96PZ7 3565 aa13.4□□□□□ -0.26
PHGDH-211ENST00000641213 NDUFB8O95169 186 aa13.4□□□□□ -0.27
PHGDH-211ENST00000641213 RASL11AQ6T310 242 aa13.4□□□□□ -0.27
PHGDH-211ENST00000641213 BCL6BQ8N143 479 aaPredicted RBP13.4□□□□□ -0.27
PHGDH-211ENST00000641213 OR4F17Q8NGA8 305 aa13.4□□□□□ -0.27
PHGDH-211ENST00000641213 NEU1Q99519 415 aa13.4□□□□□ -0.27
PHGDH-211ENST00000641213 RNF24Q9Y225 148 aa13.4□□□□□ -0.27
PHGDH-211ENST00000641213 MRPS12O15235 138 aaKnown RBP13.39□□□□□ -0.27
PHGDH-211ENST00000641213 IGLV2-11P01706 119 aa13.39□□□□□ -0.27
PHGDH-211ENST00000641213 FCGR2BP31994 310 aaPredicted RBP13.39□□□□□ -0.27
PHGDH-211ENST00000641213 SAA4P35542 130 aa13.39□□□□□ -0.27
PHGDH-211ENST00000641213 PAFAH1B2P68402 229 aa13.39□□□□□ -0.27
PHGDH-211ENST00000641213 Q56UQ5 140 aa13.39□□□□□ -0.27
PHGDH-211ENST00000641213 Q86TA4 180 aa13.39□□□□□ -0.27
PHGDH-211ENST00000641213 MS4A10Q96PG2 267 aa13.39□□□□□ -0.27
PHGDH-211ENST00000641213 PRSS22Q9GZN4 317 aa13.39□□□□□ -0.27
PHGDH-211ENST00000641213 C21orf62Q9NYP8 219 aa13.39□□□□□ -0.27
PHGDH-211ENST00000641213 C1RLQ9NZP8 487 aa13.39□□□□□ -0.27
PHGDH-211ENST00000641213 THYN1Q9P016 225 aa13.39□□□□□ -0.27
PHGDH-211ENST00000641213 ZNF492Q9P255 531 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms