RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 C15orf53Q8NAA6 179 aa4.9□□□□□ -1.63
COPS3-216ENST00000579716 OR10G2Q8NGC3 310 aa4.9□□□□□ -1.63
COPS3-216ENST00000579716 C11orf52Q96A22 123 aa4.9□□□□□ -1.63
COPS3-216ENST00000579716 C20orf78Q9BR46 151 aa4.9□□□□□ -1.63
COPS3-216ENST00000579716 SLC35B3Q9H1N7 401 aa4.9□□□□□ -1.63
COPS3-216ENST00000579716 C6orf106Q9H6K1 298 aaPredicted RBP4.9□□□□□ -1.63
COPS3-216ENST00000579716 AIG1Q9NVV5 245 aa4.9□□□□□ -1.63
COPS3-216ENST00000579716 CHD3Q12873 2000 aaKnown RBP4.9□□□□□ -1.63
COPS3-216ENST00000579716 CROCCQ5TZA2 2017 aa4.9□□□□□ -1.63
COPS3-216ENST00000579716 BIVM-ERCC5R4GMW8 1640 aa4.9□□□□□ -1.63
COPS3-216ENST00000579716 CITO14578 2027 aa4.89□□□□□ -1.63
COPS3-216ENST00000579716 FANCMQ8IYD8 2048 aa4.89□□□□□ -1.63
COPS3-216ENST00000579716 IGKV1-27A0A075B6S5 117 aa4.89□□□□□ -1.63
COPS3-216ENST00000579716 TRBV7-7A0A0K0K1E9 115 aa4.89□□□□□ -1.63
COPS3-216ENST00000579716 RBAKDNA6NC62 111 aa4.89□□□□□ -1.63
COPS3-216ENST00000579716 LYRM1O43325 122 aa4.89□□□□□ -1.63
COPS3-216ENST00000579716 ZNF688P0C7X2 276 aa4.89□□□□□ -1.63
COPS3-216ENST00000579716 IGHV4-38-2P0DP08 117 aa4.89□□□□□ -1.63
COPS3-216ENST00000579716 COX6A1P12074 109 aa4.89□□□□□ -1.63
COPS3-216ENST00000579716 CSN1S1P47710 185 aa4.89□□□□□ -1.63
COPS3-216ENST00000579716 ZNF80P51504 273 aaPredicted RBP4.89□□□□□ -1.63
COPS3-216ENST00000579716 ELOBQ15370 118 aa4.89□□□□□ -1.63
COPS3-216ENST00000579716 LGALS9CQ6DKI2 356 aa4.89□□□□□ -1.63
COPS3-216ENST00000579716 ZNF322Q6U7Q0 402 aaPredicted RBP4.89□□□□□ -1.63
COPS3-216ENST00000579716 ZNF555Q8NEP9 628 aa4.89□□□□□ -1.63
COPS3-216ENST00000579716 LSM10Q969L4 123 aaKnown RBP4.89□□□□□ -1.63
COPS3-216ENST00000579716 DIP2CQ9Y2E4 1556 aa4.89□□□□□ -1.63
COPS3-216ENST00000579716 CC2D2AQ9P2K1 1620 aa4.89□□□□□ -1.63
COPS3-216ENST00000579716 RLFQ13129 1914 aa4.89□□□□□ -1.63
COPS3-216ENST00000579716 IQGAP2Q13576 1575 aa4.88□□□□□ -1.63
COPS3-216ENST00000579716 DENND4CQ5VZ89 1909 aa4.88□□□□□ -1.63
COPS3-216ENST00000579716 IGHV3-20A0A0C4DH32 117 aa4.88□□□□□ -1.63
COPS3-216ENST00000579716 KANTRA0A1W2PQU2 76 aa4.88□□□□□ -1.63
COPS3-216ENST00000579716 PLA2G10O15496 165 aa4.88□□□□□ -1.63
COPS3-216ENST00000579716 IGKV1-5P01602 117 aa4.88□□□□□ -1.63
COPS3-216ENST00000579716 HLA-DPB1P04440 258 aa4.88□□□□□ -1.63
COPS3-216ENST00000579716 CBLN1P23435 193 aa4.88□□□□□ -1.63
COPS3-216ENST00000579716 AQP1P29972 269 aa4.88□□□□□ -1.63
COPS3-216ENST00000579716 DAPP51397 102 aa4.88□□□□□ -1.63
COPS3-216ENST00000579716 DYNLT3P51808 116 aa4.88□□□□□ -1.63
COPS3-216ENST00000579716 ATP5EP56381 51 aaPredicted RBP4.88□□□□□ -1.63
COPS3-216ENST00000579716 TFF2Q03403 129 aa4.88□□□□□ -1.63
COPS3-216ENST00000579716 ZNF678Q5SXM1 525 aa4.88□□□□□ -1.63
COPS3-216ENST00000579716 PCP2Q8IVA1 136 aa4.88□□□□□ -1.63
COPS3-216ENST00000579716 STAG3L4Q8TBR4 150 aa4.88□□□□□ -1.63
COPS3-216ENST00000579716 VSIG2Q96IQ7 327 aa4.88□□□□□ -1.63
COPS3-216ENST00000579716 ZNF286AQ9HBT8 521 aa4.88□□□□□ -1.63
COPS3-216ENST00000579716 TP73-AS1Q9UF72 201 aa4.88□□□□□ -1.63
COPS3-216ENST00000579716 LSM2Q9Y333 95 aaKnown RBP4.88□□□□□ -1.63
COPS3-216ENST00000579716 DNAJC15Q9Y5T4 150 aa4.88□□□□□ -1.63
COPS3-216ENST00000579716 ZNF706Q9Y5V0 76 aaPredicted RBP4.88□□□□□ -1.63
COPS3-216ENST00000579716 PHF3Q92576 2039 aaKnown RBP4.88□□□□□ -1.63
COPS3-216ENST00000579716 PEAK1Q9H792 1746 aa4.88□□□□□ -1.63
COPS3-216ENST00000579716 SHANK3Q9BYB0 1731 aa4.87□□□□□ -1.63
COPS3-216ENST00000579716 IGHV1OR15-1A0A075B7D0 117 aa4.87□□□□□ -1.63
COPS3-216ENST00000579716 IGKV1D-43A0A0B4J1Z2 117 aa4.87□□□□□ -1.63
COPS3-216ENST00000579716 A8MWL6 223 aa4.87□□□□□ -1.63
COPS3-216ENST00000579716 C17orf112F2Z3M2 114 aa4.87□□□□□ -1.63
COPS3-216ENST00000579716 PPP1R3DO95685 299 aa4.87□□□□□ -1.63
COPS3-216ENST00000579716 SOD1P00441 154 aa4.87□□□□□ -1.63
COPS3-216ENST00000579716 HBDP02042 147 aa4.87□□□□□ -1.63
COPS3-216ENST00000579716 ELK1P19419 428 aa4.87□□□□□ -1.63
COPS3-216ENST00000579716 IGHV1-2P23083 117 aa4.87□□□□□ -1.63
COPS3-216ENST00000579716 CCL20P78556 96 aa4.87□□□□□ -1.63
COPS3-216ENST00000579716 ORMDL2Q53FV1 153 aa4.87□□□□□ -1.63
COPS3-216ENST00000579716 SMIM5Q71RC9 77 aa4.87□□□□□ -1.63
COPS3-216ENST00000579716 MYOZ3Q8TDC0 251 aa4.87□□□□□ -1.63
COPS3-216ENST00000579716 SLC25A2Q9BXI2 301 aa4.87□□□□□ -1.63
COPS3-216ENST00000579716 TNFRSF19Q9NS68 423 aa4.87□□□□□ -1.63
COPS3-216ENST00000579716 V9GYH0 126 aa4.87□□□□□ -1.63
COPS3-216ENST00000579716 PIK3C2AO00443 1686 aa4.86□□□□□ -1.63
COPS3-216ENST00000579716 ITSN2Q9NZM3 1697 aa4.86□□□□□ -1.63
COPS3-216ENST00000579716 STRCQ7RTU9 1775 aa4.86□□□□□ -1.63
COPS3-216ENST00000579716 NLRC5Q86WI3 1866 aa4.86□□□□□ -1.63
COPS3-216ENST00000579716 DOCK6Q96HP0 2047 aa4.86□□□□□ -1.63
COPS3-216ENST00000579716 MUC21A0A140T8X8 626 aa4.86□□□□□ -1.63
COPS3-216ENST00000579716 SYS1-DBNDD2H3BUS1 97 aa4.86□□□□□ -1.63
COPS3-216ENST00000579716 K7EQD1 137 aa4.86□□□□□ -1.63
COPS3-216ENST00000579716 ATOX1O00244 68 aa4.86□□□□□ -1.63
COPS3-216ENST00000579716 IL5P05113 134 aa4.86□□□□□ -1.63
COPS3-216ENST00000579716 IGHV3-43DP0DP04 118 aa4.86□□□□□ -1.63
COPS3-216ENST00000579716 TWIST1Q15672 202 aa4.86□□□□□ -1.63
COPS3-216ENST00000579716 MPV17L2Q567V2 206 aa4.86□□□□□ -1.63
COPS3-216ENST00000579716 SCXQ7RTU7 201 aa4.86□□□□□ -1.63
COPS3-216ENST00000579716 LINC01555Q8NAE3 123 aa4.86□□□□□ -1.63
COPS3-216ENST00000579716 PRSS3P2Q8NHM4 247 aa4.86□□□□□ -1.63
COPS3-216ENST00000579716 C18orf32Q8TCD1 76 aa4.86□□□□□ -1.63
COPS3-216ENST00000579716 POLR2J2Q9GZM3 115 aaKnown RBP4.86□□□□□ -1.63
COPS3-216ENST00000579716 ADGRB1O14514 1584 aa4.86□□□□□ -1.63
COPS3-216ENST00000579716 UGGT1Q9NYU2 1555 aa4.86□□□□□ -1.63
COPS3-216ENST00000579716 MON2Q7Z3U7 1717 aa4.86□□□□□ -1.63
COPS3-216ENST00000579716 ANKRD31Q8N7Z5 1873 aa4.86□□□□□ -1.63
COPS3-216ENST00000579716 MYH8P13535 1937 aa4.85□□□□□ -1.63
COPS3-216ENST00000579716 NUP205Q92621 2012 aa4.85□□□□□ -1.63
COPS3-216ENST00000579716 TRGV8A0A0C4DH27 118 aa4.85□□□□□ -1.63
COPS3-216ENST00000579716 A0A0D9SEW6 157 aa4.85□□□□□ -1.63
COPS3-216ENST00000579716 A0A1B0GW54 56 aa4.85□□□□□ -1.63
COPS3-216ENST00000579716 LTAP01374 205 aa4.85□□□□□ -1.63
COPS3-216ENST00000579716 ZNF136P52737 540 aa4.85□□□□□ -1.63
COPS3-216ENST00000579716 HERVK_113P61574 105 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms