RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 RBMXL1Q96E39 390 aaKnown RBP3.47□□□□□ -1.85
TOPBP1-210ENST00000572787 LINC00526Q96FQ7 95 aa3.47□□□□□ -1.85
TOPBP1-210ENST00000572787 VGLL1Q99990 258 aa3.47□□□□□ -1.85
TOPBP1-210ENST00000572787 UPK3BQ9BT76 320 aa3.47□□□□□ -1.85
TOPBP1-210ENST00000572787 VAMP8Q9BV40 100 aa3.47□□□□□ -1.85
TOPBP1-210ENST00000572787 SLC35B3Q9H1N7 401 aa3.47□□□□□ -1.85
TOPBP1-210ENST00000572787 DNAJC15Q9Y5T4 150 aa3.47□□□□□ -1.85
TOPBP1-210ENST00000572787 TOPBP1Q92547 1522 aa3.47□□□□□ -1.85
TOPBP1-210ENST00000572787 DLC1Q96QB1 1528 aa3.47□□□□□ -1.85
TOPBP1-210ENST00000572787 SCN5AQ14524 2016 aa3.47□□□□□ -1.85
TOPBP1-210ENST00000572787 LOXHD1Q8IVV2 1947 aa3.46□□□□□ -1.85
TOPBP1-210ENST00000572787 CPSF1Q10570 1443 aaKnown RBP3.46□□□□□ -1.86
TOPBP1-210ENST00000572787 TRIP12Q14669 1992 aaPredicted RBP3.46□□□□□ -1.86
TOPBP1-210ENST00000572787 A0A0J9YW62 118 aa3.46□□□□□ -1.86
TOPBP1-210ENST00000572787 A0A1W2PPR1 153 aa3.46□□□□□ -1.86
TOPBP1-210ENST00000572787 A0A1W2PRS3 328 aa3.46□□□□□ -1.86
TOPBP1-210ENST00000572787 TMEM223A0PJW6 202 aa3.46□□□□□ -1.86
TOPBP1-210ENST00000572787 GRIFINA4D1Z8 144 aa3.46□□□□□ -1.86
TOPBP1-210ENST00000572787 C3orf84H3BNL1 204 aa3.46□□□□□ -1.86
TOPBP1-210ENST00000572787 H3BT86 120 aa3.46□□□□□ -1.86
TOPBP1-210ENST00000572787 M0R129 80 aa3.46□□□□□ -1.86
TOPBP1-210ENST00000572787 IGLV2-11P01706 119 aa3.46□□□□□ -1.86
TOPBP1-210ENST00000572787 GZMBP10144 247 aa3.46□□□□□ -1.86
TOPBP1-210ENST00000572787 CD28P10747 220 aa3.46□□□□□ -1.86
TOPBP1-210ENST00000572787 FOXA1P55317 472 aa3.46□□□□□ -1.86
TOPBP1-210ENST00000572787 CLLU1Q5K131 121 aa3.46□□□□□ -1.86
TOPBP1-210ENST00000572787 C10orf91Q5T1B1 145 aa3.46□□□□□ -1.86
TOPBP1-210ENST00000572787 Q6AWC8 147 aa3.46□□□□□ -1.86
TOPBP1-210ENST00000572787 SIGLECL1Q8N7X8 197 aa3.46□□□□□ -1.86
TOPBP1-210ENST00000572787 OR4X2Q8NGF9 303 aa3.46□□□□□ -1.86
TOPBP1-210ENST00000572787 ZNRD1Q9P1U0 126 aa3.46□□□□□ -1.86
TOPBP1-210ENST00000572787 SERP1Q9Y6X1 66 aa3.46□□□□□ -1.86
TOPBP1-210ENST00000572787 ADGRL1O94910 1474 aa3.46□□□□□ -1.86
TOPBP1-210ENST00000572787 AKAP11Q9UKA4 1901 aa3.46□□□□□ -1.86
TOPBP1-210ENST00000572787 FANCMQ8IYD8 2048 aa3.46□□□□□ -1.86
TOPBP1-210ENST00000572787 DOCK4Q8N1I0 1966 aa3.45□□□□□ -1.86
TOPBP1-210ENST00000572787 RAI1Q7Z5J4 1906 aaPredicted RBP3.45□□□□□ -1.86
TOPBP1-210ENST00000572787 PLXNB3Q9ULL4 1909 aa3.45□□□□□ -1.86
TOPBP1-210ENST00000572787 ZFP92A6NM28 416 aa3.45□□□□□ -1.86
TOPBP1-210ENST00000572787 C17orf51A8MQB3 221 aa3.45□□□□□ -1.86
TOPBP1-210ENST00000572787 G3V3Q6 166 aa3.45□□□□□ -1.86
TOPBP1-210ENST00000572787 SLC25A20O43772 301 aa3.45□□□□□ -1.86
TOPBP1-210ENST00000572787 SH2D1AO60880 128 aa3.45□□□□□ -1.86
TOPBP1-210ENST00000572787 TCL1BO95988 128 aa3.45□□□□□ -1.86
TOPBP1-210ENST00000572787 NPYP01303 97 aa3.45□□□□□ -1.86
TOPBP1-210ENST00000572787 IGHV1-69P01742 117 aa3.45□□□□□ -1.86
TOPBP1-210ENST00000572787 RBP4P02753 201 aa3.45□□□□□ -1.86
TOPBP1-210ENST00000572787 CFC1BP0CG36 223 aa3.45□□□□□ -1.86
TOPBP1-210ENST00000572787 CRYGAP11844 174 aa3.45□□□□□ -1.86
TOPBP1-210ENST00000572787 ETV6P41212 452 aa3.45□□□□□ -1.86
TOPBP1-210ENST00000572787 CRIP2P52943 208 aaPredicted RBP3.45□□□□□ -1.86
TOPBP1-210ENST00000572787 NOXRED1Q6NXP6 359 aa3.45□□□□□ -1.86
TOPBP1-210ENST00000572787 CRIP3Q6Q6R5 217 aa3.45□□□□□ -1.86
TOPBP1-210ENST00000572787 ZNF322Q6U7Q0 402 aaPredicted RBP3.45□□□□□ -1.86
TOPBP1-210ENST00000572787 ZFP2Q6ZN57 461 aa3.45□□□□□ -1.86
TOPBP1-210ENST00000572787 C16orf47Q6ZP98 133 aaPredicted RBP3.45□□□□□ -1.86
TOPBP1-210ENST00000572787 Q6ZUT4 128 aa3.45□□□□□ -1.86
TOPBP1-210ENST00000572787 CEND1Q8N111 149 aa3.45□□□□□ -1.86
TOPBP1-210ENST00000572787 CNEP1R1Q8N9A8 125 aa3.45□□□□□ -1.86
TOPBP1-210ENST00000572787 OTOSQ8NHW6 89 aa3.45□□□□□ -1.86
TOPBP1-210ENST00000572787 CIRBP-AS1Q8TBR5 109 aa3.45□□□□□ -1.86
TOPBP1-210ENST00000572787 TTTY13Q9BZ97 58 aa3.45□□□□□ -1.86
TOPBP1-210ENST00000572787 LSM2Q9Y333 95 aaKnown RBP3.45□□□□□ -1.86
TOPBP1-210ENST00000572787 TMEM14AQ9Y6G1 99 aa3.45□□□□□ -1.86
TOPBP1-210ENST00000572787 CLIP1P30622 1438 aa3.44□□□□□ -1.86
TOPBP1-210ENST00000572787 TRPM1Q7Z4N2 1603 aa3.44□□□□□ -1.86
TOPBP1-210ENST00000572787 ATAD5Q96QE3 1844 aa3.44□□□□□ -1.86
TOPBP1-210ENST00000572787 TSPOAP1O95153 1857 aa3.44□□□□□ -1.86
TOPBP1-210ENST00000572787 COL1A1P02452 1464 aaPredicted RBP3.44□□□□□ -1.86
TOPBP1-210ENST00000572787 IFT140Q96RY7 1462 aa3.44□□□□□ -1.86
TOPBP1-210ENST00000572787 TRBV24-1A0A075B6N3 115 aa3.44□□□□□ -1.86
TOPBP1-210ENST00000572787 TRGV5A0A0B4J1U4 118 aa3.44□□□□□ -1.86
TOPBP1-210ENST00000572787 A6NED7 52 aa3.44□□□□□ -1.86
TOPBP1-210ENST00000572787 A8MWP4 228 aa3.44□□□□□ -1.86
TOPBP1-210ENST00000572787 MCRIP1C9JLW8 97 aa3.44□□□□□ -1.86
TOPBP1-210ENST00000572787 ZNF432O94892 652 aa3.44□□□□□ -1.86
TOPBP1-210ENST00000572787 TRACP01848 142 aa3.44□□□□□ -1.86
TOPBP1-210ENST00000572787 IGLC1P0CG04 106 aa3.44□□□□□ -1.86
TOPBP1-210ENST00000572787 ZNF883P0CG24 379 aa3.44□□□□□ -1.86
TOPBP1-210ENST00000572787 TRAPPC2P0DI81 140 aa3.44□□□□□ -1.86
TOPBP1-210ENST00000572787 TRAPPC2BP0DI82 140 aa3.44□□□□□ -1.86
TOPBP1-210ENST00000572787 TPT1P13693 172 aaKnown RBP3.44□□□□□ -1.86
TOPBP1-210ENST00000572787 MRPS36P82909 103 aaKnown RBP3.44□□□□□ -1.86
TOPBP1-210ENST00000572787 EBI3Q14213 229 aa3.44□□□□□ -1.86
TOPBP1-210ENST00000572787 CLDND2Q8NHS1 167 aa3.44□□□□□ -1.86
TOPBP1-210ENST00000572787 TRAPPC1Q9Y5R8 145 aa3.44□□□□□ -1.86
TOPBP1-210ENST00000572787 NCKAP5O14513 1909 aa3.44□□□□□ -1.86
TOPBP1-210ENST00000572787 FYCO1Q9BQS8 1478 aa3.43□□□□□ -1.86
TOPBP1-210ENST00000572787 KIAA1671Q9BY89 1806 aa3.43□□□□□ -1.86
TOPBP1-210ENST00000572787 IGHV3-64DA0A0J9YX35 117 aa3.43□□□□□ -1.86
TOPBP1-210ENST00000572787 A6NDX4 124 aa3.43□□□□□ -1.86
TOPBP1-210ENST00000572787 RPL36A-HNRNPH2H7BZ11 118 aa3.43□□□□□ -1.86
TOPBP1-210ENST00000572787 IGKV1D-33P01593 117 aa3.43□□□□□ -1.86
TOPBP1-210ENST00000572787 IGKV1-33P01594 117 aa3.43□□□□□ -1.86
TOPBP1-210ENST00000572787 CCL5P13501 91 aa3.43□□□□□ -1.86
TOPBP1-210ENST00000572787 SYCNQ0VAF6 134 aa3.43□□□□□ -1.86
TOPBP1-210ENST00000572787 MIAQ16674 131 aa3.43□□□□□ -1.86
TOPBP1-210ENST00000572787 SOSTDC1Q6X4U4 206 aa3.43□□□□□ -1.86
TOPBP1-210ENST00000572787 Q6ZTC4 211 aa3.43□□□□□ -1.86
TOPBP1-210ENST00000572787 LINC00471Q8N535 108 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms