RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 PI3P19957 117 aa6.63□□□□□ -1.35
HERC1-210ENST00000560897 NPPCP23582 126 aa6.63□□□□□ -1.35
HERC1-210ENST00000560897 HOXA1P49639 335 aaPredicted RBP6.63□□□□□ -1.35
HERC1-210ENST00000560897 CCR6P51684 374 aa6.63□□□□□ -1.35
HERC1-210ENST00000560897 DHODHQ02127 395 aa6.63□□□□□ -1.35
HERC1-210ENST00000560897 WT1-ASQ06250 92 aa6.63□□□□□ -1.35
HERC1-210ENST00000560897 DMBX1Q8NFW5 382 aa6.63□□□□□ -1.35
HERC1-210ENST00000560897 OR13C8Q8NGS7 320 aa6.63□□□□□ -1.35
HERC1-210ENST00000560897 RRNAD1Q96FB5 475 aaKnown RBP6.63□□□□□ -1.35
HERC1-210ENST00000560897 MISP3Q96FF7 219 aa6.63□□□□□ -1.35
HERC1-210ENST00000560897 METTL26Q96S19 204 aa6.63□□□□□ -1.35
HERC1-210ENST00000560897 SDHCQ99643 169 aaPredicted RBP6.63□□□□□ -1.35
HERC1-210ENST00000560897 GPN1Q9HCN4 374 aaPredicted RBP6.63□□□□□ -1.35
HERC1-210ENST00000560897 GPR132Q9UNW8 380 aa6.63□□□□□ -1.35
HERC1-210ENST00000560897 LRP1Q07954 4544 aaKnown RBP6.62□□□□□ -1.35
HERC1-210ENST00000560897 TRAV6A0A075B6T7 132 aa6.62□□□□□ -1.35
HERC1-210ENST00000560897 UPK2O00526 184 aa6.62□□□□□ -1.35
HERC1-210ENST00000560897 SNAPC5O75971 98 aa6.62□□□□□ -1.35
HERC1-210ENST00000560897 NDUFB6O95139 128 aa6.62□□□□□ -1.35
HERC1-210ENST00000560897 OXTP01178 125 aa6.62□□□□□ -1.35
HERC1-210ENST00000560897 TCRBP04435 133 aa6.62□□□□□ -1.35
HERC1-210ENST00000560897 H2AFB2P0C5Z0 115 aa6.62□□□□□ -1.35
HERC1-210ENST00000560897 DEFB130BP0DP73 79 aa6.62□□□□□ -1.35
HERC1-210ENST00000560897 DEFB130AP0DP74 79 aa6.62□□□□□ -1.35
HERC1-210ENST00000560897 NQO2P16083 231 aa6.62□□□□□ -1.35
HERC1-210ENST00000560897 F2RP25116 425 aa6.62□□□□□ -1.35
HERC1-210ENST00000560897 LPAR6P43657 344 aa6.62□□□□□ -1.35
HERC1-210ENST00000560897 P2RY1P47900 373 aa6.62□□□□□ -1.35
HERC1-210ENST00000560897 FXYD7P58549 80 aa6.62□□□□□ -1.35
HERC1-210ENST00000560897 SRPXP78539 464 aa6.62□□□□□ -1.35
HERC1-210ENST00000560897 ASAH1Q13510 395 aa6.62□□□□□ -1.35
HERC1-210ENST00000560897 RGS21Q2M5E4 152 aa6.62□□□□□ -1.35
HERC1-210ENST00000560897 TMEM128Q5BJH2 165 aa6.62□□□□□ -1.35
HERC1-210ENST00000560897 LHFPL1Q86WI0 220 aa6.62□□□□□ -1.35
HERC1-210ENST00000560897 OR1L8Q8NGR8 309 aa6.62□□□□□ -1.35
HERC1-210ENST00000560897 COQ8AQ8NI60 647 aa6.62□□□□□ -1.35
HERC1-210ENST00000560897 DCANP1Q8TF63 244 aa6.62□□□□□ -1.35
HERC1-210ENST00000560897 RNF141Q8WVD5 230 aa6.62□□□□□ -1.35
HERC1-210ENST00000560897 TMEM70Q9BUB7 260 aa6.62□□□□□ -1.35
HERC1-210ENST00000560897 FXYD6Q9H0Q3 95 aa6.62□□□□□ -1.35
HERC1-210ENST00000560897 RNF213Q63HN8 5207 aa6.61□□□□□ -1.35
HERC1-210ENST00000560897 TRAV3A0A0B4J244 114 aa6.61□□□□□ -1.35
HERC1-210ENST00000560897 LYRM9A8MSI8 78 aa6.61□□□□□ -1.35
HERC1-210ENST00000560897 H3BMM0 161 aa6.61□□□□□ -1.35
HERC1-210ENST00000560897 PLA2G10O15496 165 aa6.61□□□□□ -1.35
HERC1-210ENST00000560897 IGKV3-20P01619 116 aa6.61□□□□□ -1.35
HERC1-210ENST00000560897 ATP5G1P05496 136 aa6.61□□□□□ -1.35
HERC1-210ENST00000560897 HLA-DRB4P13762 266 aa6.61□□□□□ -1.35
HERC1-210ENST00000560897 ATP5G3P48201 142 aa6.61□□□□□ -1.35
HERC1-210ENST00000560897 AKR1C2P52895 323 aa6.61□□□□□ -1.35
HERC1-210ENST00000560897 RND3P61587 244 aa6.61□□□□□ -1.35
HERC1-210ENST00000560897 ZNF600Q6ZNG1 722 aa6.61□□□□□ -1.35
HERC1-210ENST00000560897 H2BFWTQ7Z2G1 175 aa6.61□□□□□ -1.35
HERC1-210ENST00000560897 LGI3Q8N145 548 aa6.61□□□□□ -1.35
HERC1-210ENST00000560897 UPK3BQ9BT76 320 aa6.61□□□□□ -1.35
HERC1-210ENST00000560897 TMEM208Q9BTX3 173 aa6.61□□□□□ -1.35
HERC1-210ENST00000560897 PDCD10Q9BUL8 212 aa6.61□□□□□ -1.35
HERC1-210ENST00000560897 NAA60Q9H7X0 242 aa6.61□□□□□ -1.35
HERC1-210ENST00000560897 TMEM140Q9NV12 185 aa6.61□□□□□ -1.35
HERC1-210ENST00000560897 HLA-DRB4X5D2U9 266 aa6.61□□□□□ -1.35
HERC1-210ENST00000560897 INMT-MINDY4F8WBC2 141 aa6.6□□□□□ -1.35
HERC1-210ENST00000560897 KRASP01116 189 aa6.6□□□□□ -1.35
HERC1-210ENST00000560897 FGF2P09038 288 aa6.6□□□□□ -1.35
HERC1-210ENST00000560897 NPBWR1P48145 328 aa6.6□□□□□ -1.35
HERC1-210ENST00000560897 AP2S1P53680 142 aaPredicted RBP6.6□□□□□ -1.35
HERC1-210ENST00000560897 UBE2MP61081 183 aaKnown RBP6.6□□□□□ -1.35
HERC1-210ENST00000560897 SP6Q3SY56 376 aa6.6□□□□□ -1.35
HERC1-210ENST00000560897 Q6ZRN7 208 aaPredicted RBP6.6□□□□□ -1.35
HERC1-210ENST00000560897 OR1P1Q8NH06 330 aa6.6□□□□□ -1.35
HERC1-210ENST00000560897 OR4A16Q8NH70 328 aa6.6□□□□□ -1.35
HERC1-210ENST00000560897 PINX1Q96BK5 328 aaKnown RBP6.6□□□□□ -1.35
HERC1-210ENST00000560897 TMEM56Q96MV1 263 aa6.6□□□□□ -1.35
HERC1-210ENST00000560897 GPHA2Q96T91 129 aa6.6□□□□□ -1.35
HERC1-210ENST00000560897 RTBDNQ9BSG5 229 aaPredicted RBP6.6□□□□□ -1.35
HERC1-210ENST00000560897 C20orf85Q9H1P6 137 aa6.6□□□□□ -1.35
HERC1-210ENST00000560897 PLEKHA2Q9HB19 425 aa6.6□□□□□ -1.35
HERC1-210ENST00000560897 FAM212BQ9NTI7 297 aaPredicted RBP6.6□□□□□ -1.35
HERC1-210ENST00000560897 NUDT15Q9NV35 164 aa6.6□□□□□ -1.35
HERC1-210ENST00000560897 A0A087WTM6 91 aa6.59□□□□□ -1.35
HERC1-210ENST00000560897 TEX50A0A1B0GTY4 177 aa6.59□□□□□ -1.35
HERC1-210ENST00000560897 CRYM-AS1A6NIL9 109 aa6.59□□□□□ -1.35
HERC1-210ENST00000560897 RBFOX2O43251 390 aaKnown RBP eCLIP6.59□□□□□ -1.35
HERC1-210ENST00000560897 PRAF2O60831 178 aa6.59□□□□□ -1.35
HERC1-210ENST00000560897 SCGB2A1O75556 95 aa6.59□□□□□ -1.35
HERC1-210ENST00000560897 PTTG1O95997 202 aa6.59□□□□□ -1.35
HERC1-210ENST00000560897 MT-CO2P00403 227 aa6.59□□□□□ -1.35
HERC1-210ENST00000560897 IGHV3-48P01763 117 aa6.59□□□□□ -1.35
HERC1-210ENST00000560897 OR5AC1P0C628 307 aa6.59□□□□□ -1.35
HERC1-210ENST00000560897 OR4E1P0C645 316 aa6.59□□□□□ -1.35
HERC1-210ENST00000560897 DNAH10OSP0CZ25 163 aa6.59□□□□□ -1.35
HERC1-210ENST00000560897 ANXA7P20073 488 aaKnown RBP6.59□□□□□ -1.35
HERC1-210ENST00000560897 TMEM268Q5VZI3 342 aa6.59□□□□□ -1.35
HERC1-210ENST00000560897 NRARPQ7Z6K4 114 aa6.59□□□□□ -1.35
HERC1-210ENST00000560897 NFE4Q86UQ8 179 aa6.59□□□□□ -1.35
HERC1-210ENST00000560897 UHRF2Q96PU4 802 aa6.59□□□□□ -1.35
HERC1-210ENST00000560897 ENY2Q9NPA8 101 aa6.59□□□□□ -1.35
HERC1-210ENST00000560897 FKBP11Q9NYL4 201 aa6.59□□□□□ -1.35
HERC1-210ENST00000560897 COMMD9Q9P000 198 aa6.59□□□□□ -1.35
HERC1-210ENST00000560897 CACFD1Q9UGQ2 172 aa6.59□□□□□ -1.35
HERC1-210ENST00000560897 FLVCR2Q9UPI3 526 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms