RNA–Protein interactions for RNA: ENST00000554423.1

IFT43-208, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-208ENST00000554423 GAPDHP04406 335 aaKnown RBP1.21□□□□□ -2.22
IFT43-208ENST00000554423 ARG1P05089 322 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 CRYBA1P05813 215 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 RBMY1DP0C7P1 496 aaKnown RBP1.21□□□□□ -2.22
IFT43-208ENST00000554423 SEC11BP0C7V7 166 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 RBMY1A1P0DJD3 496 aaKnown RBP1.21□□□□□ -2.22
IFT43-208ENST00000554423 DEFA4P12838 97 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 CCL3L1P16619 93 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 KITLGP21583 273 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 FGF7P21781 194 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 TUBG1P23258 451 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 COL8A2P25067 703 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 RPL13AP40429 203 aaKnown RBP1.21□□□□□ -2.22
IFT43-208ENST00000554423 CD200P41217 278 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 REG1BP48304 166 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 SULT1A1P50225 295 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 KLF3P57682 345 aaPredicted RBP1.21□□□□□ -2.22
IFT43-208ENST00000554423 TAS2R30P59541 319 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 UBE2G2P60604 165 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 RAB2AP61019 212 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 UBE2KP61086 200 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 RAB11AP62491 216 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 CCL8P80075 99 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 TNFAIP6P98066 277 aaPredicted RBP1.21□□□□□ -2.22
IFT43-208ENST00000554423 CATR1Q13166 79 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 ERCC8Q13216 396 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 ZNF266Q14584 549 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 GUSBP1Q15486 140 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 CLEC12BQ2HXU8 276 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 SMIM21Q3B7S5 101 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 KRTAP13-2Q52LG2 175 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 RPL39P5Q59GN2 51 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 NMSQ5H8A3 153 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 DNLZQ5SXM8 178 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 AVPI1Q5T686 147 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 PRAMEF5Q5TYX0 476 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 NCR3LG1Q68D85 454 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 LCN12Q6JVE5 192 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 Q6ZS92 163 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 SSX7Q7RTT5 188 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 ASCL5Q7RTU5 278 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 H2BFWTQ7Z2G1 175 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 Q8IYB0 196 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 ZCCHC24Q8N2G6 241 aaKnown RBP1.21□□□□□ -2.22
IFT43-208ENST00000554423 EIF4E3Q8N5X7 224 aaKnown RBP1.21□□□□□ -2.22
IFT43-208ENST00000554423 DRAM1Q8N682 238 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 ZNF645Q8N7E2 425 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 FAM216BQ8N7L0 139 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 UBAC2Q8NBM4 344 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 NECAP1Q8NC96 275 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 FAM57AQ8TBR7 257 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 DTD1Q8TEA8 209 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 SFT2D1Q8WV19 159 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 H1FXQ92522 213 aaKnown RBP1.21□□□□□ -2.22
IFT43-208ENST00000554423 GALMQ96C23 342 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 MUCL1Q96DR8 90 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 SMIM8Q96KF7 97 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 TMEM56Q96MV1 263 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 OR4C12Q96R67 309 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 PBDC1Q9BVG4 233 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 HINT2Q9BX68 163 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 SEC11CQ9BY50 192 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 ARV1Q9H2C2 271 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 C11orf1Q9H5F2 150 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 RPP21Q9H633 154 aaKnown RBP1.21□□□□□ -2.22
IFT43-208ENST00000554423 HES4Q9HCC6 221 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 KCNJ16Q9NPI9 418 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 PARP11Q9NR21 331 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 SMCO4Q9NRQ5 59 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 LYRM2Q9NU23 88 aaPredicted RBP1.21□□□□□ -2.22
IFT43-208ENST00000554423 CALYQ9NYX4 217 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 SIGLEC8Q9NYZ4 499 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 CACFD1Q9UGQ2 172 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 PRELID1Q9Y255 219 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 PRELID3BQ9Y3B1 194 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 FAM215AQ9Y5M1 114 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 KPTNQ9Y664 436 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 URGCP-MRPS24S4R325 110 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 TMEM56-RWDD3S4R434 201 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 ASCC3Q8N3C0 2202 aaKnown RBP1.21□□□□□ -2.22
IFT43-208ENST00000554423 CABIN1Q9Y6J0 2220 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 ZFHX4Q86UP3 3567 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 FREM2Q5SZK8 3169 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 SEC16AO15027 2179 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 TNRC6AQ8NDV7 1962 aaKnown RBP1.21□□□□□ -2.22
IFT43-208ENST00000554423 A0A0C4DFX4 3053 aa1.21□□□□□ -2.22
IFT43-208ENST00000554423 COL6A3P12111 3177 aa1.2□□□□□ -2.22
IFT43-208ENST00000554423 BSNQ9UPA5 3926 aa1.2□□□□□ -2.22
IFT43-208ENST00000554423 CACNA1EQ15878 2313 aa1.2□□□□□ -2.22
IFT43-208ENST00000554423 VPS13AQ96RL7 3174 aa1.2□□□□□ -2.22
IFT43-208ENST00000554423 TGIF2-C20orf24A0A0A6YYL0 155 aa1.2□□□□□ -2.22
IFT43-208ENST00000554423 IGHV3-21A0A0B4J1V1 117 aa1.2□□□□□ -2.22
IFT43-208ENST00000554423 IGHV3-72A0A0B4J1Y9 119 aa1.2□□□□□ -2.22
IFT43-208ENST00000554423 TRAV38-1A0A0B4J264 116 aa1.2□□□□□ -2.22
IFT43-208ENST00000554423 A0A0G2JLM5 398 aa1.2□□□□□ -2.22
IFT43-208ENST00000554423 A0A1W2PRD5 423 aa1.2□□□□□ -2.22
IFT43-208ENST00000554423 A0A1W2PRF3 423 aa1.2□□□□□ -2.22
IFT43-208ENST00000554423 A0A1W2PRM7 423 aa1.2□□□□□ -2.22
IFT43-208ENST00000554423 C7orf77A4D0Y5 90 aa1.2□□□□□ -2.22
IFT43-208ENST00000554423 MAP1LC3B2A6NCE7 125 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms