RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 TRAV1-1A0A0B4J248 108 aa0.39□□□□□ -2.35
CCDC38-206ENST00000548771 MAGEA2P43356 314 aa0.39□□□□□ -2.35
CCDC38-206ENST00000548771 LPCAT4Q643R3 524 aa0.39□□□□□ -2.35
CCDC38-206ENST00000548771 SFXN4Q6P4A7 337 aa0.39□□□□□ -2.35
CCDC38-206ENST00000548771 SMIM5Q71RC9 77 aa0.39□□□□□ -2.35
CCDC38-206ENST00000548771 KRTAP19-3Q7Z4W3 81 aa0.39□□□□□ -2.35
CCDC38-206ENST00000548771 PIK3R4Q99570 1358 aa0.39□□□□□ -2.35
CCDC38-206ENST00000548771 SPG11Q96JI7 2443 aa0.39□□□□□ -2.35
CCDC38-206ENST00000548771 CCDC88BA6NC98 1476 aa0.39□□□□□ -2.35
CCDC38-206ENST00000548771 COL1A1P02452 1464 aaPredicted RBP0.39□□□□□ -2.35
CCDC38-206ENST00000548771 LRRC9Q6ZRR7 1453 aa0.39□□□□□ -2.35
CCDC38-206ENST00000548771 MAGI2Q86UL8 1455 aa0.39□□□□□ -2.35
CCDC38-206ENST00000548771 ARHGAP35Q9NRY4 1499 aa0.39□□□□□ -2.35
CCDC38-206ENST00000548771 MROH2AA6NES4 1674 aa0.39□□□□□ -2.35
CCDC38-206ENST00000548771 CLTCQ00610 1675 aaKnown RBP0.39□□□□□ -2.35
CCDC38-206ENST00000548771 COL4A6Q14031 1691 aa0.39□□□□□ -2.35
CCDC38-206ENST00000548771 MEGF8Q7Z7M0 2845 aa0.39□□□□□ -2.35
CCDC38-206ENST00000548771 GPR98Q8WXG9 6306 aa0.39□□□□□ -2.35
CCDC38-206ENST00000548771 SPTBN2O15020 2390 aa0.39□□□□□ -2.35
CCDC38-206ENST00000548771 IGF2RP11717 2491 aa0.39□□□□□ -2.35
CCDC38-206ENST00000548771 ABCC5O15440 1437 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 EEA1Q15075 1411 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 C10orf71Q711Q0 1435 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 LRRC37A3O60309 1634 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 LAMC1P11047 1609 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 NRAPQ86VF7 1730 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.38□□□□□ -2.35
CCDC38-206ENST00000548771 MARF1Q9Y4F3 1742 aaKnown RBP0.38□□□□□ -2.35
CCDC38-206ENST00000548771 GVINP1Q7Z2Y8 2422 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 ABCA2Q9BZC7 2435 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 JMJD1CQ15652 2540 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 TLN1Q9Y490 2541 aaKnown RBP0.38□□□□□ -2.35
CCDC38-206ENST00000548771 KMT2AQ03164 3969 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 PRRC2CQ9Y520 2896 aaKnown RBP0.38□□□□□ -2.35
CCDC38-206ENST00000548771 CNOT1A5YKK6 2376 aaKnown RBP0.38□□□□□ -2.35
CCDC38-206ENST00000548771 C2CD3Q4AC94 2353 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 PAPPA2Q9BXP8 1791 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 SCN11AQ9UI33 1791 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 SSPOA2VEC9 5147 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 ADGRB1O14514 1584 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 ARHGEF5Q12774 1597 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 PQLC2LA1A4F0 135 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 EEF1E1-BLOC1S5C9J1V9 151 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 UBL3O95164 117 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 IGKV1-5P01602 117 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 ISG15P05161 165 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 AP2S1P53680 142 aaPredicted RBP0.38□□□□□ -2.35
CCDC38-206ENST00000548771 RAB5BP61020 215 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 PDE6HQ13956 83 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 RHEBQ15382 184 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 RNASE10Q5GAN6 216 aaKnown RBP0.38□□□□□ -2.35
CCDC38-206ENST00000548771 MIR17HGQ75NE6 70 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 SBSPONQ8IVN8 264 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 DEFB123Q8N688 67 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 OR13C4Q8NGS5 318 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 IMP4Q96G21 291 aaKnown RBP0.38□□□□□ -2.35
CCDC38-206ENST00000548771 LYSTQ99698 3801 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 COMMD5Q9GZQ3 224 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 XPNPEP1Q9NQW7 623 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 SLC39A9Q9NUM3 307 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 CMTM6Q9NX76 183 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 CSMD3Q7Z407 3707 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 ZANQ9Y493 2812 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 SACSQ9NZJ4 4579 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 COL6A5A8TX70 2615 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 ATRQ13535 2644 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 LAMA4Q16363 1823 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 PKD1L3Q7Z443 1732 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 HMCN2Q8NDA2 5059 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 TGP01266 2768 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 MROH1Q8NDA8 1641 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 TOP2AP11388 1531 aaKnown RBP0.38□□□□□ -2.35
CCDC38-206ENST00000548771 HFM1A2PYH4 1435 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 SCAPERQ9BY12 1400 aa0.38□□□□□ -2.35
CCDC38-206ENST00000548771 NIPBLQ6KC79 2804 aaeCLIP0.37□□□□□ -2.35
CCDC38-206ENST00000548771 EML5Q05BV3 1969 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 EML6Q6ZMW3 1958 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 DYNC2H1Q8NCM8 4307 aaKnown RBP0.37□□□□□ -2.35
CCDC38-206ENST00000548771 FLNCQ14315 2725 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 ITPR2Q14571 2701 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 KMT2DO14686 5537 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 KIDINS220Q9ULH0 1771 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 PIK3C2AO00443 1686 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 PLCH1Q4KWH8 1693 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 SYNE2Q8WXH0 6885 aaKnown RBP0.37□□□□□ -2.35
CCDC38-206ENST00000548771 ADGRB2O60241 1585 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 PLXNC1O60486 1568 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 UGGT1Q9NYU2 1555 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 PXDNQ92626 1479 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 DNAH1Q9P2D7 4330 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 SPTAN1Q13813 2472 aaKnown RBP0.37□□□□□ -2.35
CCDC38-206ENST00000548771 RIF1Q5UIP0 2472 aaKnown RBP0.37□□□□□ -2.35
CCDC38-206ENST00000548771 M0R2N4 97 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 SULT1B1O43704 296 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 DCTN3O75935 186 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 TNNC2P02585 160 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 TPM3P06753 285 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 BAALC-AS2P0C853 105 aa0.37□□□□□ -2.35
CCDC38-206ENST00000548771 MGST1P10620 155 aaKnown RBP0.37□□□□□ -2.35
CCDC38-206ENST00000548771 MIFP14174 115 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms