RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 PAX6P26367 422 aa4.48□□□□□ -1.69
CHKA-208ENST00000533910 BRS3P32247 399 aa4.48□□□□□ -1.69
CHKA-208ENST00000533910 GPX4P36969 197 aaPredicted RBP4.48□□□□□ -1.69
CHKA-208ENST00000533910 SNCAP37840 140 aa4.48□□□□□ -1.69
CHKA-208ENST00000533910 OPRK1P41145 380 aa4.48□□□□□ -1.69
CHKA-208ENST00000533910 SUB1P53999 127 aaKnown RBP eCLIP4.48□□□□□ -1.69
CHKA-208ENST00000533910 ZNF616Q08AN1 781 aa4.48□□□□□ -1.69
CHKA-208ENST00000533910 ZNF726P1Q15940 193 aa4.48□□□□□ -1.69
CHKA-208ENST00000533910 TNXAQ16473 311 aa4.48□□□□□ -1.69
CHKA-208ENST00000533910 RUSC1-AS1Q66K80 236 aa4.48□□□□□ -1.69
CHKA-208ENST00000533910 SPSB3Q6PJ21 355 aa4.48□□□□□ -1.69
CHKA-208ENST00000533910 PQLC2Q6ZP29 291 aa4.48□□□□□ -1.69
CHKA-208ENST00000533910 SLC16A13Q7RTY0 426 aa4.48□□□□□ -1.69
CHKA-208ENST00000533910 SMIM15Q7Z3B0 74 aa4.48□□□□□ -1.69
CHKA-208ENST00000533910 TMEM144Q7Z5S9 345 aa4.48□□□□□ -1.69
CHKA-208ENST00000533910 STHQ8IWL8 128 aa4.48□□□□□ -1.69
CHKA-208ENST00000533910 OR2D3Q8NGH3 330 aa4.48□□□□□ -1.69
CHKA-208ENST00000533910 OR1P1Q8NH06 330 aa4.48□□□□□ -1.69
CHKA-208ENST00000533910 MGST2Q99735 147 aa4.48□□□□□ -1.69
CHKA-208ENST00000533910 SCRT1Q9BWW7 348 aa4.48□□□□□ -1.69
CHKA-208ENST00000533910 GGTLC1Q9BX51 225 aa4.48□□□□□ -1.69
CHKA-208ENST00000533910 KRTAP9-8Q9BYQ0 159 aa4.48□□□□□ -1.69
CHKA-208ENST00000533910 RPRMQ9NS64 109 aa4.48□□□□□ -1.69
CHKA-208ENST00000533910 FBXO7Q9Y3I1 522 aa4.48□□□□□ -1.69
CHKA-208ENST00000533910 CSMD2Q7Z408 3487 aa4.48□□□□□ -1.69
CHKA-208ENST00000533910 ITPR3Q14573 2671 aa4.48□□□□□ -1.69
CHKA-208ENST00000533910 SEC14L6B5MCN3 397 aa4.47□□□□□ -1.69
CHKA-208ENST00000533910 CORTO00230 105 aa4.47□□□□□ -1.69
CHKA-208ENST00000533910 RS1O15537 224 aa4.47□□□□□ -1.69
CHKA-208ENST00000533910 NDUFB8O95169 186 aa4.47□□□□□ -1.69
CHKA-208ENST00000533910 HLA-DRB1P01911 266 aa4.47□□□□□ -1.69
CHKA-208ENST00000533910 HBE1P02100 147 aa4.47□□□□□ -1.69
CHKA-208ENST00000533910 CD5P06127 495 aa4.47□□□□□ -1.69
CHKA-208ENST00000533910 IGHV4-38-2P0DP08 117 aa4.47□□□□□ -1.69
CHKA-208ENST00000533910 CD24P25063 80 aa4.47□□□□□ -1.69
CHKA-208ENST00000533910 MFAP2P55001 183 aa4.47□□□□□ -1.69
CHKA-208ENST00000533910 RAB2AP61019 212 aa4.47□□□□□ -1.69
CHKA-208ENST00000533910 NDPQ00604 133 aa4.47□□□□□ -1.69
CHKA-208ENST00000533910 AKR1C1Q04828 323 aa4.47□□□□□ -1.69
CHKA-208ENST00000533910 HES1Q14469 280 aa4.47□□□□□ -1.69
CHKA-208ENST00000533910 HNF4GQ14541 408 aa4.47□□□□□ -1.69
CHKA-208ENST00000533910 PLGLAQ15195 96 aa4.47□□□□□ -1.69
CHKA-208ENST00000533910 KLF17Q5JT82 389 aaPredicted RBP4.47□□□□□ -1.69
CHKA-208ENST00000533910 FFAR4Q5NUL3 377 aa4.47□□□□□ -1.69
CHKA-208ENST00000533910 PRR27Q6MZM9 219 aa4.47□□□□□ -1.69
CHKA-208ENST00000533910 ZNF562Q6V9R5 426 aa4.47□□□□□ -1.69
CHKA-208ENST00000533910 SSX7Q7RTT5 188 aa4.47□□□□□ -1.69
CHKA-208ENST00000533910 RPP25LQ8N5L8 163 aaKnown RBP4.47□□□□□ -1.69
CHKA-208ENST00000533910 ZNF709Q8N972 641 aa4.47□□□□□ -1.69
CHKA-208ENST00000533910 Q8N9W7 124 aa4.47□□□□□ -1.69
CHKA-208ENST00000533910 THAP8Q8NA92 274 aa4.47□□□□□ -1.69
CHKA-208ENST00000533910 MPLKIPQ8TAP9 179 aa4.47□□□□□ -1.69
CHKA-208ENST00000533910 MBD3L1Q8WWY6 194 aa4.47□□□□□ -1.69
CHKA-208ENST00000533910 LINC00052Q96N35 136 aa4.47□□□□□ -1.69
CHKA-208ENST00000533910 FNDC4Q9H6D8 234 aaPredicted RBP4.47□□□□□ -1.69
CHKA-208ENST00000533910 VSIRQ9H7M9 311 aa4.47□□□□□ -1.69
CHKA-208ENST00000533910 NPVFQ9HCQ7 196 aa4.47□□□□□ -1.69
CHKA-208ENST00000533910 C1RLQ9NZP8 487 aa4.47□□□□□ -1.69
CHKA-208ENST00000533910 PITPNC1Q9UKF7 332 aa4.47□□□□□ -1.69
CHKA-208ENST00000533910 F11RQ9Y624 299 aaKnown RBP4.47□□□□□ -1.69
CHKA-208ENST00000533910 PXMP4Q9Y6I8 212 aa4.47□□□□□ -1.69
CHKA-208ENST00000533910 URGCP-MRPS24S4R325 110 aa4.47□□□□□ -1.69
CHKA-208ENST00000533910 PDZD2O15018 2839 aa4.47□□□□□ -1.69
CHKA-208ENST00000533910 MAP1AP78559 2803 aaPredicted RBP4.47□□□□□ -1.69
CHKA-208ENST00000533910 ZANQ9Y493 2812 aa4.47□□□□□ -1.69
CHKA-208ENST00000533910 VPS13CQ709C8 3753 aa4.46□□□□□ -1.7
CHKA-208ENST00000533910 IGKV1OR2-108A0A075B7D4 117 aa4.46□□□□□ -1.7
CHKA-208ENST00000533910 IGHV7-81A0A0B4J1V7 117 aa4.46□□□□□ -1.7
CHKA-208ENST00000533910 CTXND1A0A1B0GTU2 59 aa4.46□□□□□ -1.7
CHKA-208ENST00000533910 A0A1B0GW15 77 aa4.46□□□□□ -1.7
CHKA-208ENST00000533910 MAP1LC3B2A6NCE7 125 aa4.46□□□□□ -1.7
CHKA-208ENST00000533910 TMEM238C9JI98 176 aa4.46□□□□□ -1.7
CHKA-208ENST00000533910 AGPAT2O15120 278 aa4.46□□□□□ -1.7
CHKA-208ENST00000533910 YIF1AO95070 293 aa4.46□□□□□ -1.7
CHKA-208ENST00000533910 REG1AP05451 166 aa4.46□□□□□ -1.7
CHKA-208ENST00000533910 LINC00869P0C866 280 aa4.46□□□□□ -1.7
CHKA-208ENST00000533910 IGHV4-31P0DP07 118 aa4.46□□□□□ -1.7
CHKA-208ENST00000533910 RPL29P47914 159 aaKnown RBP4.46□□□□□ -1.7
CHKA-208ENST00000533910 GNB1P62873 340 aa4.46□□□□□ -1.7
CHKA-208ENST00000533910 RAB31Q13636 194 aa4.46□□□□□ -1.7
CHKA-208ENST00000533910 FXYD3Q14802 87 aa4.46□□□□□ -1.7
CHKA-208ENST00000533910 TMEM249Q2WGJ8 235 aa4.46□□□□□ -1.7
CHKA-208ENST00000533910 KLK9Q2XQG4 91 aa4.46□□□□□ -1.7
CHKA-208ENST00000533910 ACOT6Q3I5F7 207 aaPredicted RBP4.46□□□□□ -1.7
CHKA-208ENST00000533910 FAM120AOSQ5T036 256 aa4.46□□□□□ -1.7
CHKA-208ENST00000533910 C10orf91Q5T1B1 145 aa4.46□□□□□ -1.7
CHKA-208ENST00000533910 BRD3OSQ6XYD6 125 aa4.46□□□□□ -1.7
CHKA-208ENST00000533910 OR9G4Q8NGQ1 327 aa4.46□□□□□ -1.7
CHKA-208ENST00000533910 OR1L6Q8NGR2 347 aa4.46□□□□□ -1.7
CHKA-208ENST00000533910 PIFOQ8TCI5 191 aa4.46□□□□□ -1.7
CHKA-208ENST00000533910 SSMEM1Q8WWF3 244 aa4.46□□□□□ -1.7
CHKA-208ENST00000533910 ARPC1AQ92747 370 aa4.46□□□□□ -1.7
CHKA-208ENST00000533910 SLC35E1Q96K37 410 aa4.46□□□□□ -1.7
CHKA-208ENST00000533910 MAP1LC3BQ9GZQ8 125 aa4.46□□□□□ -1.7
CHKA-208ENST00000533910 SMDT1Q9H4I9 107 aa4.46□□□□□ -1.7
CHKA-208ENST00000533910 KLK9Q9UKQ9 250 aa4.46□□□□□ -1.7
CHKA-208ENST00000533910 MOB4Q9Y3A3 225 aa4.46□□□□□ -1.7
CHKA-208ENST00000533910 IGKV1D-37A0A075B6S9 117 aa4.45□□□□□ -1.7
CHKA-208ENST00000533910 IGHV3OR16-10A0A075B7F0 116 aa4.45□□□□□ -1.7
CHKA-208ENST00000533910 TCRBV4S1A1TA0A5B7 111 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms