RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 SFTA2Q6UW10 78 aa5.87□□□□□ -1.47
SYNPO2-205ENST00000504178 C5orf30Q96GV9 206 aa5.87□□□□□ -1.47
SYNPO2-205ENST00000504178 IGKV1D-17A0A075B6S4 117 aa5.87□□□□□ -1.47
SYNPO2-205ENST00000504178 D6R8Y8 96 aa5.87□□□□□ -1.47
SYNPO2-205ENST00000504178 M0R2P5 195 aa5.87□□□□□ -1.47
SYNPO2-205ENST00000504178 PLNP26678 52 aa5.87□□□□□ -1.47
SYNPO2-205ENST00000504178 ZNF329Q86UD4 541 aa5.87□□□□□ -1.47
SYNPO2-205ENST00000504178 MBD3L1Q8WWY6 194 aa5.87□□□□□ -1.47
SYNPO2-205ENST00000504178 LINC00477Q96M19 166 aa5.87□□□□□ -1.47
SYNPO2-205ENST00000504178 E7EQL1 145 aa5.86□□□□□ -1.47
SYNPO2-205ENST00000504178 ERCC8Q13216 396 aa5.86□□□□□ -1.47
SYNPO2-205ENST00000504178 ZNF876PQ49A33 203 aa5.86□□□□□ -1.47
SYNPO2-205ENST00000504178 KLF17Q5JT82 389 aaPredicted RBP5.86□□□□□ -1.47
SYNPO2-205ENST00000504178 Q5PR19 223 aa5.86□□□□□ -1.47
SYNPO2-205ENST00000504178 SIP14410 1827 aa5.86□□□□□ -1.47
SYNPO2-205ENST00000504178 NDUFS8O00217 210 aa5.86□□□□□ -1.47
SYNPO2-205ENST00000504178 PRR31Q5SQ13 230 aa5.86□□□□□ -1.47
SYNPO2-205ENST00000504178 IGFL4Q6B9Z1 124 aa5.86□□□□□ -1.47
SYNPO2-205ENST00000504178 LSM4Q9Y4Z0 139 aaKnown RBP5.86□□□□□ -1.47
SYNPO2-205ENST00000504178 COL4A6Q14031 1691 aa5.86□□□□□ -1.47
SYNPO2-205ENST00000504178 TCRAP04437 139 aa5.86□□□□□ -1.47
SYNPO2-205ENST00000504178 SAA4P35542 130 aa5.86□□□□□ -1.47
SYNPO2-205ENST00000504178 SUPT4H1P63272 117 aaKnown RBP5.86□□□□□ -1.47
SYNPO2-205ENST00000504178 PRR30Q53SZ7 412 aaPredicted RBP5.86□□□□□ -1.47
SYNPO2-205ENST00000504178 LCN12Q6JVE5 192 aa5.86□□□□□ -1.47
SYNPO2-205ENST00000504178 TEX43Q6ZNM6 134 aa5.86□□□□□ -1.47
SYNPO2-205ENST00000504178 Q6ZS92 163 aa5.86□□□□□ -1.47
SYNPO2-205ENST00000504178 Q96MF0 132 aa5.86□□□□□ -1.47
SYNPO2-205ENST00000504178 FNDC4Q9H6D8 234 aaPredicted RBP5.86□□□□□ -1.47
SYNPO2-205ENST00000504178 C5orf63A6NC05 138 aa5.86□□□□□ -1.47
SYNPO2-205ENST00000504178 TMEM155Q4W5P6 130 aa5.86□□□□□ -1.47
SYNPO2-205ENST00000504178 C1QTNF4Q9BXJ3 329 aa5.86□□□□□ -1.47
SYNPO2-205ENST00000504178 SIGLEC9Q9Y336 463 aa5.86□□□□□ -1.47
SYNPO2-205ENST00000504178 LY6HO94772 140 aa5.86□□□□□ -1.47
SYNPO2-205ENST00000504178 BMPERQ8N8U9 685 aa5.86□□□□□ -1.47
SYNPO2-205ENST00000504178 RASL10AQ92737 203 aa5.86□□□□□ -1.47
SYNPO2-205ENST00000504178 TRAV9-2A0A087WT02 112 aa5.85□□□□□ -1.47
SYNPO2-205ENST00000504178 LINC01549A6NIU2 74 aa5.85□□□□□ -1.47
SYNPO2-205ENST00000504178 TMEM249Q2WGJ8 235 aa5.85□□□□□ -1.47
SYNPO2-205ENST00000504178 GATD1Q8NB37 220 aa5.85□□□□□ -1.47
SYNPO2-205ENST00000504178 IFI27L1Q96BM0 104 aa5.85□□□□□ -1.47
SYNPO2-205ENST00000504178 LINC00473A8K010 186 aa5.85□□□□□ -1.47
SYNPO2-205ENST00000504178 GGTLC3B5MD39 225 aa5.85□□□□□ -1.47
SYNPO2-205ENST00000504178 LINC01619G3V211 115 aa5.85□□□□□ -1.47
SYNPO2-205ENST00000504178 HGFACQ04756 655 aa5.85□□□□□ -1.47
SYNPO2-205ENST00000504178 C5orf24Q7Z6I8 188 aa5.85□□□□□ -1.47
SYNPO2-205ENST00000504178 Q8TAT8 98 aa5.85□□□□□ -1.47
SYNPO2-205ENST00000504178 NINQ8N4C6 2090 aa5.85□□□□□ -1.47
SYNPO2-205ENST00000504178 CACNA1CQ13936 2221 aa5.85□□□□□ -1.47
SYNPO2-205ENST00000504178 IGKV1-5P01602 117 aa5.85□□□□□ -1.47
SYNPO2-205ENST00000504178 RHPN1-AS1Q9BWJ2 59 aa5.85□□□□□ -1.47
SYNPO2-205ENST00000504178 TRBV6-6A0A0A6YYG2 114 aa5.85□□□□□ -1.47
SYNPO2-205ENST00000504178 A0A1B0GV72 72 aa5.85□□□□□ -1.47
SYNPO2-205ENST00000504178 K7ENP7 123 aa5.85□□□□□ -1.47
SYNPO2-205ENST00000504178 FGF16O43320 207 aa5.85□□□□□ -1.47
SYNPO2-205ENST00000504178 ATRAIDQ6UW56 229 aa5.85□□□□□ -1.47
SYNPO2-205ENST00000504178 KLHDC3Q9BQ90 382 aa5.85□□□□□ -1.47
SYNPO2-205ENST00000504178 SMPXQ9UHP9 88 aa5.85□□□□□ -1.47
SYNPO2-205ENST00000504178 TMEM238C9JI98 176 aa5.85□□□□□ -1.47
SYNPO2-205ENST00000504178 MSMBP08118 114 aa5.85□□□□□ -1.47
SYNPO2-205ENST00000504178 ORAOV1Q8WV07 137 aa5.85□□□□□ -1.47
SYNPO2-205ENST00000504178 CSTL1Q9H114 145 aa5.85□□□□□ -1.47
SYNPO2-205ENST00000504178 JPT2Q9H910 190 aa5.85□□□□□ -1.47
SYNPO2-205ENST00000504178 URB1O60287 2271 aaKnown RBP5.85□□□□□ -1.47
SYNPO2-205ENST00000504178 A6NNC1 897 aa5.84□□□□□ -1.47
SYNPO2-205ENST00000504178 ATXN8Q156A1 80 aa5.84□□□□□ -1.47
SYNPO2-205ENST00000504178 DERL1Q9BUN8 251 aa5.84□□□□□ -1.47
SYNPO2-205ENST00000504178 SYNJ2BPP57105 145 aa5.84□□□□□ -1.47
SYNPO2-205ENST00000504178 DMRTA1Q5VZB9 504 aa5.84□□□□□ -1.47
SYNPO2-205ENST00000504178 PLEKHB2Q96CS7 222 aa5.84□□□□□ -1.47
SYNPO2-205ENST00000504178 GSN-AS1Q9NRJ2 163 aa5.84□□□□□ -1.47
SYNPO2-205ENST00000504178 LAMTOR2Q9Y2Q5 125 aa5.84□□□□□ -1.47
SYNPO2-205ENST00000504178 LHFPL1Q86WI0 220 aa5.84□□□□□ -1.47
SYNPO2-205ENST00000504178 PAX4O43316 350 aa5.84□□□□□ -1.47
SYNPO2-205ENST00000504178 SS18Q15532 418 aa5.84□□□□□ -1.47
SYNPO2-205ENST00000504178 MAPK1IP1LQ8NDC0 245 aa5.84□□□□□ -1.47
SYNPO2-205ENST00000504178 THADAQ6YHU6 1953 aa5.84□□□□□ -1.47
SYNPO2-205ENST00000504178 DOCK3Q8IZD9 2030 aa5.84□□□□□ -1.48
SYNPO2-205ENST00000504178 PLXNA3P51805 1871 aa5.84□□□□□ -1.48
SYNPO2-205ENST00000504178 LINC00587B1AMM8 73 aa5.84□□□□□ -1.48
SYNPO2-205ENST00000504178 GATA3P23771 443 aa5.84□□□□□ -1.48
SYNPO2-205ENST00000504178 DAZ1Q9NQZ3 744 aaKnown RBP5.84□□□□□ -1.48
SYNPO2-205ENST00000504178 ERG28Q9UKR5 140 aa5.84□□□□□ -1.48
SYNPO2-205ENST00000504178 CLDN16Q9Y5I7 305 aa5.84□□□□□ -1.48
SYNPO2-205ENST00000504178 VCYO14598 125 aa5.83□□□□□ -1.48
SYNPO2-205ENST00000504178 NTF4P34130 210 aa5.83□□□□□ -1.48
SYNPO2-205ENST00000504178 RASL11AQ6T310 242 aa5.83□□□□□ -1.48
SYNPO2-205ENST00000504178 A0A087WWL8 130 aa5.83□□□□□ -1.48
SYNPO2-205ENST00000504178 F8WEM9 126 aa5.83□□□□□ -1.48
SYNPO2-205ENST00000504178 LINC01559Q495D7 138 aa5.83□□□□□ -1.48
SYNPO2-205ENST00000504178 NMSQ5H8A3 153 aa5.83□□□□□ -1.48
SYNPO2-205ENST00000504178 RNF144BQ7Z419 303 aa5.83□□□□□ -1.48
SYNPO2-205ENST00000504178 SRSF8Q9BRL6 282 aaKnown RBP5.83□□□□□ -1.48
SYNPO2-205ENST00000504178 ZNF581Q9P0T4 197 aa5.83□□□□□ -1.48
SYNPO2-205ENST00000504178 LINC00205P59089 165 aa5.83□□□□□ -1.48
SYNPO2-205ENST00000504178 HSD52Q0P140 79 aa5.83□□□□□ -1.48
SYNPO2-205ENST00000504178 FOXL2NBQ6ZUU3 175 aa5.83□□□□□ -1.48
SYNPO2-205ENST00000504178 IL17RELQ6ZVW7 336 aa5.83□□□□□ -1.48
SYNPO2-205ENST00000504178 C14orf178Q8N769 122 aaPredicted RBP5.83□□□□□ -1.48
SYNPO2-205ENST00000504178 AGMATQ9BSE5 352 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms