RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 KLF14Q8TD94 323 aaPredicted RBP7.46□□□□□ -1.21
NIPBL-202ENST00000448238 RAMP1O60894 148 aa7.46□□□□□ -1.21
NIPBL-202ENST00000448238 YBX2Q9Y2T7 364 aaKnown RBP7.46□□□□□ -1.21
NIPBL-202ENST00000448238 NGFRP08138 427 aa7.46□□□□□ -1.22
NIPBL-202ENST00000448238 HLA-DRB4P13762 266 aa7.46□□□□□ -1.22
NIPBL-202ENST00000448238 ANXA2RQ3ZCQ2 193 aa7.46□□□□□ -1.22
NIPBL-202ENST00000448238 NAA38Q9BRA0 125 aaKnown RBP7.46□□□□□ -1.22
NIPBL-202ENST00000448238 HLA-DRB4X5D2U9 266 aa7.46□□□□□ -1.22
NIPBL-202ENST00000448238 PATJQ8NI35 1801 aa7.46□□□□□ -1.22
NIPBL-202ENST00000448238 LINC01551Q86U37 167 aa7.46□□□□□ -1.22
NIPBL-202ENST00000448238 CARD19Q96LW7 228 aa7.46□□□□□ -1.22
NIPBL-202ENST00000448238 KIR2DL5BA0A0G2JN68 375 aa7.46□□□□□ -1.22
NIPBL-202ENST00000448238 KIR2DL5BA0A0G2JPC4 375 aa7.46□□□□□ -1.22
NIPBL-202ENST00000448238 KIR2DL5AQ8N109 375 aa7.46□□□□□ -1.22
NIPBL-202ENST00000448238 C15orf53Q8NAA6 179 aa7.46□□□□□ -1.22
NIPBL-202ENST00000448238 DEFB124Q8NES8 71 aa7.46□□□□□ -1.22
NIPBL-202ENST00000448238 TSC2P49815 1807 aa7.46□□□□□ -1.22
NIPBL-202ENST00000448238 TRBV5-5A0A0J9YX44 114 aa7.46□□□□□ -1.22
NIPBL-202ENST00000448238 IGLV3-27P01718 113 aa7.46□□□□□ -1.22
NIPBL-202ENST00000448238 MIR17HGQ75NE6 70 aa7.46□□□□□ -1.22
NIPBL-202ENST00000448238 IGLV3-16A0A075B6K0 115 aa7.45□□□□□ -1.22
NIPBL-202ENST00000448238 Q71RC1 249 aaPredicted RBP7.45□□□□□ -1.22
NIPBL-202ENST00000448238 LYPD1Q8N2G4 141 aa7.45□□□□□ -1.22
NIPBL-202ENST00000448238 TEX22C9J3V5 150 aa7.45□□□□□ -1.22
NIPBL-202ENST00000448238 DAD1P61803 113 aa7.45□□□□□ -1.22
NIPBL-202ENST00000448238 DENND4AQ7Z401 1863 aa7.45□□□□□ -1.22
NIPBL-202ENST00000448238 SUPT4H1P63272 117 aaKnown RBP7.45□□□□□ -1.22
NIPBL-202ENST00000448238 LINC00312Q9Y6C7 94 aa7.45□□□□□ -1.22
NIPBL-202ENST00000448238 SRRM4A7MD48 611 aaKnown RBP7.45□□□□□ -1.22
NIPBL-202ENST00000448238 TFF3Q07654 80 aa7.45□□□□□ -1.22
NIPBL-202ENST00000448238 hDV102S1A0JD36 115 aa7.45□□□□□ -1.22
NIPBL-202ENST00000448238 C20orf173Q96LM9 149 aa7.45□□□□□ -1.22
NIPBL-202ENST00000448238 COL3A1P02461 1466 aaPredicted RBP7.45□□□□□ -1.22
NIPBL-202ENST00000448238 TET2Q6N021 2002 aaPredicted RBP7.44□□□□□ -1.22
NIPBL-202ENST00000448238 RGPD8O14715 1765 aaPredicted RBP7.44□□□□□ -1.22
NIPBL-202ENST00000448238 WFDC5Q8TCV5 224 aa7.44□□□□□ -1.22
NIPBL-202ENST00000448238 C17orf77Q96MU5 243 aa7.44□□□□□ -1.22
NIPBL-202ENST00000448238 MAST2Q6P0Q8 1798 aa7.44□□□□□ -1.22
NIPBL-202ENST00000448238 IGHV3-23P01764 117 aa7.44□□□□□ -1.22
NIPBL-202ENST00000448238 TTTY12Q9BZ98 90 aa7.44□□□□□ -1.22
NIPBL-202ENST00000448238 DOCK1Q14185 1865 aa7.44□□□□□ -1.22
NIPBL-202ENST00000448238 TRBV7-1A0A0A6YYK4 115 aa7.44□□□□□ -1.22
NIPBL-202ENST00000448238 DOCK2Q92608 1830 aa7.44□□□□□ -1.22
NIPBL-202ENST00000448238 CCL3P10147 92 aa7.44□□□□□ -1.22
NIPBL-202ENST00000448238 RGPD5Q99666 1765 aa7.44□□□□□ -1.22
NIPBL-202ENST00000448238 RIMBP3CA6NJZ7 1639 aa7.44□□□□□ -1.22
NIPBL-202ENST00000448238 RIMBP3BA6NNM3 1639 aa7.44□□□□□ -1.22
NIPBL-202ENST00000448238 RIMBP3Q9UFD9 1639 aa7.44□□□□□ -1.22
NIPBL-202ENST00000448238 SSC5DA1L4H1 1573 aa7.44□□□□□ -1.22
NIPBL-202ENST00000448238 FAM231BA6NCW3 169 aa7.44□□□□□ -1.22
NIPBL-202ENST00000448238 OCC1Q8TAD7 63 aa7.44□□□□□ -1.22
NIPBL-202ENST00000448238 C4AP0C0L4 1744 aa7.44□□□□□ -1.22
NIPBL-202ENST00000448238 C4BP0C0L5 1744 aa7.44□□□□□ -1.22
NIPBL-202ENST00000448238 FNDC10F2Z333 226 aa7.44□□□□□ -1.22
NIPBL-202ENST00000448238 HMGA1P17096 107 aaKnown RBP7.44□□□□□ -1.22
NIPBL-202ENST00000448238 DEFB123Q8N688 67 aa7.44□□□□□ -1.22
NIPBL-202ENST00000448238 MBNL3Q9NUK0 354 aaKnown RBP7.44□□□□□ -1.22
NIPBL-202ENST00000448238 LY96Q9Y6Y9 160 aa7.44□□□□□ -1.22
NIPBL-202ENST00000448238 ZNF142P52746 1687 aaPredicted RBP7.43□□□□□ -1.22
NIPBL-202ENST00000448238 YPEL1O60688 119 aa7.43□□□□□ -1.22
NIPBL-202ENST00000448238 NANOS3P60323 173 aaKnown RBP7.43□□□□□ -1.22
NIPBL-202ENST00000448238 NREPQ16612 68 aa7.43□□□□□ -1.22
NIPBL-202ENST00000448238 HIGD2BQ4VC39 106 aa7.43□□□□□ -1.22
NIPBL-202ENST00000448238 RFNGQ9Y644 331 aa7.43□□□□□ -1.22
NIPBL-202ENST00000448238 A0A1W2PPM0 123 aa7.43□□□□□ -1.22
NIPBL-202ENST00000448238 LTBRP36941 435 aa7.43□□□□□ -1.22
NIPBL-202ENST00000448238 ZNF826PQ6ZT77 177 aa7.43□□□□□ -1.22
NIPBL-202ENST00000448238 C9JQL5 133 aa7.43□□□□□ -1.22
NIPBL-202ENST00000448238 CLPSP04118 112 aa7.43□□□□□ -1.22
NIPBL-202ENST00000448238 HOXB4P17483 251 aaPredicted RBP7.43□□□□□ -1.22
NIPBL-202ENST00000448238 COL14A1Q05707 1796 aaKnown RBP7.43□□□□□ -1.22
NIPBL-202ENST00000448238 A0A1W2PRX2 142 aa7.43□□□□□ -1.22
NIPBL-202ENST00000448238 H3BMG7 143 aa7.43□□□□□ -1.22
NIPBL-202ENST00000448238 EFNB3Q15768 340 aa7.43□□□□□ -1.22
NIPBL-202ENST00000448238 C9orf139Q6ZV77 190 aa7.43□□□□□ -1.22
NIPBL-202ENST00000448238 LEAP2Q969E1 77 aa7.43□□□□□ -1.22
NIPBL-202ENST00000448238 K7EP34 96 aa7.43□□□□□ -1.22
NIPBL-202ENST00000448238 C7orf69Q9H7B7 122 aa7.43□□□□□ -1.22
NIPBL-202ENST00000448238 A0A1W2PR77 199 aa7.43□□□□□ -1.22
NIPBL-202ENST00000448238 GFRA4Q9GZZ7 299 aa7.43□□□□□ -1.22
NIPBL-202ENST00000448238 TINCRA0A1B0GVN0 87 aa7.42□□□□□ -1.22
NIPBL-202ENST00000448238 PRB3Q04118 309 aaPredicted RBP7.42□□□□□ -1.22
NIPBL-202ENST00000448238 HCSTQ9UBK5 93 aa7.42□□□□□ -1.22
NIPBL-202ENST00000448238 CELA3AP09093 270 aa7.42□□□□□ -1.22
NIPBL-202ENST00000448238 ATP5EP56381 51 aaPredicted RBP7.42□□□□□ -1.22
NIPBL-202ENST00000448238 KIAA0040Q15053 153 aa7.42□□□□□ -1.22
NIPBL-202ENST00000448238 KCPQ6ZWJ8 1503 aa7.42□□□□□ -1.22
NIPBL-202ENST00000448238 LYRM9A8MSI8 78 aa7.42□□□□□ -1.22
NIPBL-202ENST00000448238 PFN2P35080 140 aa7.42□□□□□ -1.22
NIPBL-202ENST00000448238 ZNF474Q6S9Z5 364 aaPredicted RBP7.42□□□□□ -1.22
NIPBL-202ENST00000448238 KLHDC9Q8NEP7 349 aa7.42□□□□□ -1.22
NIPBL-202ENST00000448238 MYEOVQ96EZ4 313 aa7.42□□□□□ -1.22
NIPBL-202ENST00000448238 VSIG2Q96IQ7 327 aa7.42□□□□□ -1.22
NIPBL-202ENST00000448238 COLCA1Q6ZS62 124 aa7.42□□□□□ -1.22
NIPBL-202ENST00000448238 LYL1P12980 280 aa7.42□□□□□ -1.22
NIPBL-202ENST00000448238 PDE6GP18545 87 aa7.42□□□□□ -1.22
NIPBL-202ENST00000448238 CFPP27918 469 aa7.42□□□□□ -1.22
NIPBL-202ENST00000448238 METRNQ9UJH8 293 aa7.42□□□□□ -1.22
NIPBL-202ENST00000448238 YPEL2Q96QA6 119 aa7.42□□□□□ -1.22
NIPBL-202ENST00000448238 CRIM1Q9NZV1 1036 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms