RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 KLF13Q9Y2Y9 288 aaPredicted RBP6.18□□□□□ -1.42
CCR9-201ENST00000355983 TRAV3A0A0B4J244 114 aa6.18□□□□□ -1.42
CCR9-201ENST00000355983 A0A1W2PQM1 296 aa6.18□□□□□ -1.42
CCR9-201ENST00000355983 WI2-2373I1.2A0A1W2PRP0 233 aa6.18□□□□□ -1.42
CCR9-201ENST00000355983 K7ERJ3 54 aa6.18□□□□□ -1.42
CCR9-201ENST00000355983 COX7A2P2O60397 106 aa6.18□□□□□ -1.42
CCR9-201ENST00000355983 PSPNO60542 156 aa6.18□□□□□ -1.42
CCR9-201ENST00000355983 SLC25A5P05141 298 aaKnown RBP6.18□□□□□ -1.42
CCR9-201ENST00000355983 CSN3P07498 182 aa6.18□□□□□ -1.42
CCR9-201ENST00000355983 ACP1P24666 158 aa6.18□□□□□ -1.42
CCR9-201ENST00000355983 PRR30Q53SZ7 412 aaPredicted RBP6.18□□□□□ -1.42
CCR9-201ENST00000355983 WDR86Q86TI4 376 aa6.18□□□□□ -1.42
CCR9-201ENST00000355983 THAP8Q8NA92 274 aa6.18□□□□□ -1.42
CCR9-201ENST00000355983 RPEQ96AT9 228 aa6.18□□□□□ -1.42
CCR9-201ENST00000355983 IGHV1OR21-1A0A087WYE8 117 aa6.17□□□□□ -1.42
CCR9-201ENST00000355983 ZNF785A8K8V0 405 aa6.17□□□□□ -1.42
CCR9-201ENST00000355983 FABP5P3A8MUU1 101 aa6.17□□□□□ -1.42
CCR9-201ENST00000355983 ATP5LO75964 103 aa6.17□□□□□ -1.42
CCR9-201ENST00000355983 IFI27P40305 119 aaPredicted RBP6.17□□□□□ -1.42
CCR9-201ENST00000355983 PRRG4Q9BZD6 226 aa6.17□□□□□ -1.42
CCR9-201ENST00000355983 F11RQ9Y624 299 aaKnown RBP6.17□□□□□ -1.42
CCR9-201ENST00000355983 DYSFO75923 2080 aa6.17□□□□□ -1.42
CCR9-201ENST00000355983 A0A087WX48 190 aa6.17□□□□□ -1.42
CCR9-201ENST00000355983 C16orf97H3BN30 126 aa6.17□□□□□ -1.42
CCR9-201ENST00000355983 KLK10O43240 276 aa6.17□□□□□ -1.42
CCR9-201ENST00000355983 DUX1O43812 170 aa6.17□□□□□ -1.42
CCR9-201ENST00000355983 ZNF688P0C7X2 276 aa6.17□□□□□ -1.42
CCR9-201ENST00000355983 TNFRSF1AP19438 455 aa6.17□□□□□ -1.42
CCR9-201ENST00000355983 SMCPP49901 116 aaPredicted RBP6.17□□□□□ -1.42
CCR9-201ENST00000355983 PLP2Q04941 152 aa6.17□□□□□ -1.42
CCR9-201ENST00000355983 FHL3Q13643 280 aa6.17□□□□□ -1.42
CCR9-201ENST00000355983 Q86TA4 180 aa6.17□□□□□ -1.42
CCR9-201ENST00000355983 NFE4Q86UQ8 179 aa6.17□□□□□ -1.42
CCR9-201ENST00000355983 TANC2Q9HCD6 1990 aa6.17□□□□□ -1.42
CCR9-201ENST00000355983 TRBV7-3A0A075B6L6 115 aa6.16□□□□□ -1.42
CCR9-201ENST00000355983 TRAV5A0A0B4J249 113 aa6.16□□□□□ -1.42
CCR9-201ENST00000355983 A0A1W2PPC4 97 aa6.16□□□□□ -1.42
CCR9-201ENST00000355983 IGKCP01834 107 aa6.16□□□□□ -1.42
CCR9-201ENST00000355983 TCRAP04437 139 aa6.16□□□□□ -1.42
CCR9-201ENST00000355983 RNASE2P10153 161 aaKnown RBP6.16□□□□□ -1.42
CCR9-201ENST00000355983 COL8A1P27658 744 aa6.16□□□□□ -1.42
CCR9-201ENST00000355983 CCL11P51671 97 aa6.16□□□□□ -1.42
CCR9-201ENST00000355983 MORN5Q5VZ52 161 aa6.16□□□□□ -1.42
CCR9-201ENST00000355983 ORMDL3Q8N138 153 aa6.16□□□□□ -1.42
CCR9-201ENST00000355983 TMEM126AQ9H061 195 aa6.16□□□□□ -1.42
CCR9-201ENST00000355983 UNC13CQ8NB66 2214 aa6.16□□□□□ -1.42
CCR9-201ENST00000355983 PRSS29PA6NIE9 313 aa6.16□□□□□ -1.42
CCR9-201ENST00000355983 LMO7DNF2Z398 122 aa6.16□□□□□ -1.42
CCR9-201ENST00000355983 UPK2O00526 184 aa6.16□□□□□ -1.42
CCR9-201ENST00000355983 PYYP10082 97 aa6.16□□□□□ -1.42
CCR9-201ENST00000355983 COL8A2P25067 703 aa6.16□□□□□ -1.42
CCR9-201ENST00000355983 NDUFV3P56181 108 aaKnown RBP6.16□□□□□ -1.42
CCR9-201ENST00000355983 TFF2Q03403 129 aa6.16□□□□□ -1.42
CCR9-201ENST00000355983 FAM104BQ5XKR9 115 aa6.16□□□□□ -1.42
CCR9-201ENST00000355983 PATE2Q6UY27 113 aa6.16□□□□□ -1.42
CCR9-201ENST00000355983 SMIM20Q8N5G0 67 aa6.16□□□□□ -1.42
CCR9-201ENST00000355983 LINC01600Q96MT4 127 aa6.16□□□□□ -1.42
CCR9-201ENST00000355983 MAP1LC3AQ9H492 121 aa6.16□□□□□ -1.42
CCR9-201ENST00000355983 RAB9BQ9NP90 201 aa6.16□□□□□ -1.42
CCR9-201ENST00000355983 YAE1D1Q9NRH1 226 aa6.16□□□□□ -1.42
CCR9-201ENST00000355983 IGKV2D-26A0A0A0MRZ7 120 aa6.15□□□□□ -1.42
CCR9-201ENST00000355983 PGPA6NDG6 321 aa6.15□□□□□ -1.42
CCR9-201ENST00000355983 CXCL13O43927 109 aa6.15□□□□□ -1.42
CCR9-201ENST00000355983 RBP4P02753 201 aa6.15□□□□□ -1.42
CCR9-201ENST00000355983 CCL3P10147 92 aa6.15□□□□□ -1.42
CCR9-201ENST00000355983 CFHR1Q03591 330 aa6.15□□□□□ -1.42
CCR9-201ENST00000355983 TWIST1Q15672 202 aa6.15□□□□□ -1.42
CCR9-201ENST00000355983 TM4SF20Q53R12 229 aa6.15□□□□□ -1.42
CCR9-201ENST00000355983 OR13A1Q8NGR1 328 aa6.15□□□□□ -1.42
CCR9-201ENST00000355983 CARD19Q96LW7 228 aa6.15□□□□□ -1.42
CCR9-201ENST00000355983 OTORQ9NRC9 128 aa6.15□□□□□ -1.42
CCR9-201ENST00000355983 TRBV20-1A0A075B6N2 111 aa6.15□□□□□ -1.43
CCR9-201ENST00000355983 PRRG2O14669 202 aa6.15□□□□□ -1.43
CCR9-201ENST00000355983 MRPL33O75394 65 aaKnown RBP6.15□□□□□ -1.43
CCR9-201ENST00000355983 DPM2O94777 84 aa6.15□□□□□ -1.43
CCR9-201ENST00000355983 ARMS2P0C7Q2 107 aa6.15□□□□□ -1.43
CCR9-201ENST00000355983 LINC00205P59089 165 aa6.15□□□□□ -1.43
CCR9-201ENST00000355983 GNG5P63218 68 aa6.15□□□□□ -1.43
CCR9-201ENST00000355983 LOXL1Q08397 574 aaPredicted RBP6.15□□□□□ -1.43
CCR9-201ENST00000355983 ASPHD1Q5U4P2 390 aa6.15□□□□□ -1.43
CCR9-201ENST00000355983 MORN3Q6PF18 240 aaPredicted RBP6.15□□□□□ -1.43
CCR9-201ENST00000355983 DKK2Q9UBU2 259 aa6.15□□□□□ -1.43
CCR9-201ENST00000355983 IQCF6A8MYZ5 107 aa6.14□□□□□ -1.43
CCR9-201ENST00000355983 FCN3O75636 299 aa6.14□□□□□ -1.43
CCR9-201ENST00000355983 FAM106CPP0CH98 169 aa6.14□□□□□ -1.43
CCR9-201ENST00000355983 UBE2D3P61077 147 aa6.14□□□□□ -1.43
CCR9-201ENST00000355983 UBE2D2P62837 147 aa6.14□□□□□ -1.43
CCR9-201ENST00000355983 LY6DQ14210 128 aa6.14□□□□□ -1.43
CCR9-201ENST00000355983 PCOLCEQ15113 449 aa6.14□□□□□ -1.43
CCR9-201ENST00000355983 MRPL23Q16540 153 aaKnown RBP6.14□□□□□ -1.43
CCR9-201ENST00000355983 FAM106AQ4KMX7 169 aa6.14□□□□□ -1.43
CCR9-201ENST00000355983 FAM53AQ6NSI3 398 aaPredicted RBP6.14□□□□□ -1.43
CCR9-201ENST00000355983 CITED2Q99967 270 aaPredicted RBP6.14□□□□□ -1.43
CCR9-201ENST00000355983 HINT2Q9BX68 163 aa6.14□□□□□ -1.43
CCR9-201ENST00000355983 RAB1BQ9H0U4 201 aa6.14□□□□□ -1.43
CCR9-201ENST00000355983 HOXA3O43365 443 aaPredicted RBP6.14□□□□□ -1.43
CCR9-201ENST00000355983 FCER1GP30273 86 aa6.14□□□□□ -1.43
CCR9-201ENST00000355983 SSR4P51571 173 aa6.14□□□□□ -1.43
CCR9-201ENST00000355983 SUB1P53999 127 aaKnown RBP eCLIP6.14□□□□□ -1.43
CCR9-201ENST00000355983 ADIPOQQ15848 244 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms