RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Srp9P49962 86 aa7.15□□□□□ -1.27
Trim39-201ENSMUST00000042717 Arf6P62331 175 aa7.15□□□□□ -1.27
Trim39-201ENSMUST00000042717 Guk1Q64520 198 aa7.15□□□□□ -1.27
Trim39-201ENSMUST00000042717 Ypel2Q65Z95 119 aa7.15□□□□□ -1.27
Trim39-201ENSMUST00000042717 Ube2d2bQ6ZWY6 147 aa7.15□□□□□ -1.27
Trim39-201ENSMUST00000042717 Olfr1396Q7TQS8 315 aa7.15□□□□□ -1.27
Trim39-201ENSMUST00000042717 Olfr1168Q7TR25 312 aa7.15□□□□□ -1.27
Trim39-201ENSMUST00000042717 Prickle3Q80VL3 624 aa7.15□□□□□ -1.27
Trim39-201ENSMUST00000042717 C030005K15RikQ8BQN9 115 aa7.15□□□□□ -1.27
Trim39-201ENSMUST00000042717 9130230L23RikQ8CC80 163 aa7.15□□□□□ -1.27
Trim39-201ENSMUST00000042717 Mef2cQ8CFN5 474 aa7.15□□□□□ -1.27
Trim39-201ENSMUST00000042717 TprkbQ8QZZ7 175 aa7.15□□□□□ -1.27
Trim39-201ENSMUST00000042717 Cyb5bQ9CQX2 146 aaKnown RBP7.15□□□□□ -1.27
Trim39-201ENSMUST00000042717 Armc10Q9D0L7 306 aa7.15□□□□□ -1.27
Trim39-201ENSMUST00000042717 Ypel1Q9ESC7 118 aa7.15□□□□□ -1.27
Trim39-201ENSMUST00000042717 Trbv23A0A0A6YWQ1 115 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Bpifa2P07743 235 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Lef1P27782 397 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Hist1h1eP43274 219 aaKnown RBP7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Pax6P63015 422 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Zfp85Q7TMC9 473 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Spink6Q8BT20 105 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Dmrtc2Q8CGW9 370 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Rbm48Q8K2X2 371 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Prss45Q8K4I7 317 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Vmn1r229Q8R2A9 306 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Rbpms2Q8VC52 206 aaKnown RBP7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Mrpl3Q99N95 348 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Sp5Q9JHX2 398 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Sumo3Q9Z172 110 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Ighv5-8A0A075B676 92 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Btbd35f23A0A0R4J2B9 498 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Ca11O70354 328 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 P01759 136 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Ccl2P10148 148 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Rps16P14131 146 aaKnown RBP7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Nkx2-1P50220 372 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Defb18Q30KP5 85 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Ubald1Q6P3B2 176 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Sys1Q78S06 156 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Sytl3Q99N48 607 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Rab27bQ99P58 218 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Carhsp1Q9CR86 148 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 2900055J20RikQ9D6G3 140 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Cbln3Q9JHG0 197 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Rgs21V9GXQ3 152 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Dscaml1Q4VA61 2053 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Med13lQ6JPI3 2207 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Ighv4-1A0A075B5R5 116 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Gm20824A0A087WS97 222 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Ighv1-37A0A0A6YW32 117 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Pax2P32114 414 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Pcp4P63054 62 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Pax5Q02650 391 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Tmem52bQ0VBF2 186 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 KncnQ307W7 124 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Znf575Q3TXZ1 239 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Rnase11Q5GAM9 192 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 SlaQ60898 281 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Ccsmst1Q6RUT7 136 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Olfr452Q7TRV8 317 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Olfr205Q7TS37 305 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Harbi1Q8BR93 349 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Prelid1Q8R107 217 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Olfr344Q8VFP9 309 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Olfr133Q8VG94 312 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 St3gal6Q8VIB3 329 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Rnaseh2cQ9CQ18 166 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Wrap73Q9JM98 462 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 FlncQ8VHX6 2726 aaKnown RBP7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Hivep2Q3UHF7 2430 aa7.14□□□□□ -1.27
Trim39-201ENSMUST00000042717 Ighv1-81A0A075B5Y4 117 aa7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 SncaO55042 140 aaKnown RBP7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 Ercc1P07903 298 aa7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 P10404 641 aa7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 Prrx2Q06348 247 aa7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 Q0VG49 157 aa7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 St8sia3Q64689 380 aa7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 Ceacam9Q78T27 234 aa7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 Olfr1356Q7TQU8 320 aa7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 Lpar6Q8BMC0 344 aa7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 C1qtnf5Q8K479 243 aa7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 Elovl6Q920L5 267 aa7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 Q9CQ90 155 aa7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 NmbQ9CR53 121 aa7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 ChtopQ9CY57 249 aaKnown RBP7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 Ndufb10Q9DCS9 176 aa7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 HpgdsQ9JHF7 199 aa7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 Bin3Q9JI08 253 aa7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 Ighv3-4A0A0A6YXF1 117 aa7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 Fthl17bA2AHC5 176 aa7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 Fthl17cA2AHC6 176 aa7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 Fam98cE9PYD1 344 aa7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 Gm21970F6XX07 295 aa7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 Gm20821J3QPJ2 227 aa7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 Hmgb3O54879 200 aaKnown RBP7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 Siva1O54926 175 aa7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 Muc13P19467 573 aa7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 Tcl1b2P56841 117 aa7.13□□□□□ -1.27
Trim39-201ENSMUST00000042717 CycsP62897 105 aaKnown RBP7.13□□□□□ -1.27
Retrieved 100 of 22,080 RNA–protein pairs in 9.8 ms