RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 A0A1B0GWJ7 208 aa9.32□□□□□ -0.92
CLIP1-219ENST00000620786 ZNF815PA8K554 130 aa9.32□□□□□ -0.92
CLIP1-219ENST00000620786 SLC25A20O43772 301 aa9.32□□□□□ -0.92
CLIP1-219ENST00000620786 FCN3O75636 299 aa9.32□□□□□ -0.92
CLIP1-219ENST00000620786 PSG1P11464 419 aa9.32□□□□□ -0.92
CLIP1-219ENST00000620786 RPRMLQ8N4K4 120 aa9.32□□□□□ -0.92
CLIP1-219ENST00000620786 FAM169BQ8N8A8 192 aa9.32□□□□□ -0.92
CLIP1-219ENST00000620786 PEF1Q9UBV8 284 aaKnown RBP9.32□□□□□ -0.92
CLIP1-219ENST00000620786 TRAV12-3A0A0B4J271 114 aa9.32□□□□□ -0.92
CLIP1-219ENST00000620786 SRSF1Q07955 248 aaKnown RBP eCLIP9.32□□□□□ -0.92
CLIP1-219ENST00000620786 SCRT1Q9BWW7 348 aa9.32□□□□□ -0.92
CLIP1-219ENST00000620786 SLC25A39Q9BZJ4 359 aaPredicted RBP9.32□□□□□ -0.92
CLIP1-219ENST00000620786 NXT2Q9NPJ8 142 aaKnown RBP9.32□□□□□ -0.92
CLIP1-219ENST00000620786 SEC16AO15027 2179 aa9.32□□□□□ -0.92
CLIP1-219ENST00000620786 PMS2P5A8MQ11 134 aa9.32□□□□□ -0.92
CLIP1-219ENST00000620786 INSP01308 110 aa9.32□□□□□ -0.92
CLIP1-219ENST00000620786 CCL20P78556 96 aa9.32□□□□□ -0.92
CLIP1-219ENST00000620786 SDHCQ99643 169 aaPredicted RBP9.32□□□□□ -0.92
CLIP1-219ENST00000620786 C1QTNF4Q9BXJ3 329 aa9.32□□□□□ -0.92
CLIP1-219ENST00000620786 F8VVB4 439 aa9.32□□□□□ -0.92
CLIP1-219ENST00000620786 F8VWA3 439 aa9.32□□□□□ -0.92
CLIP1-219ENST00000620786 GLRX5Q86SX6 157 aa9.32□□□□□ -0.92
CLIP1-219ENST00000620786 PLP1P60201 277 aa9.31□□□□□ -0.92
CLIP1-219ENST00000620786 SSBP4Q9BWG4 385 aaPredicted RBP9.31□□□□□ -0.92
CLIP1-219ENST00000620786 DTX1Q86Y01 620 aa9.31□□□□□ -0.92
CLIP1-219ENST00000620786 TRAV3A0A0B4J244 114 aa9.31□□□□□ -0.92
CLIP1-219ENST00000620786 A0A1W2PRE2 83 aa9.31□□□□□ -0.92
CLIP1-219ENST00000620786 NPIPB5A8MRT5 1133 aa9.31□□□□□ -0.92
CLIP1-219ENST00000620786 NR2C2APQ86WQ0 139 aa9.31□□□□□ -0.92
CLIP1-219ENST00000620786 CYSLTR1Q9Y271 337 aa9.31□□□□□ -0.92
CLIP1-219ENST00000620786 SYNJ2BPP57105 145 aa9.31□□□□□ -0.92
CLIP1-219ENST00000620786 IGFL3Q6UXB1 125 aa9.31□□□□□ -0.92
CLIP1-219ENST00000620786 FAM110DQ8TAY7 271 aaPredicted RBP9.31□□□□□ -0.92
CLIP1-219ENST00000620786 MGAMO43451 1857 aa9.31□□□□□ -0.92
CLIP1-219ENST00000620786 C5orf63A6NC05 138 aa9.3□□□□□ -0.92
CLIP1-219ENST00000620786 TTC9CQ8N5M4 171 aa9.3□□□□□ -0.92
CLIP1-219ENST00000620786 NUDT11Q96G61 164 aa9.3□□□□□ -0.92
CLIP1-219ENST00000620786 CR1LQ2VPA4 569 aa9.3□□□□□ -0.92
CLIP1-219ENST00000620786 SIGLEC9Q9Y336 463 aa9.3□□□□□ -0.92
CLIP1-219ENST00000620786 TRAV9-1A0A075B6T8 112 aa9.3□□□□□ -0.92
CLIP1-219ENST00000620786 LY6G6EA0A0G2JKS1 128 aa9.3□□□□□ -0.92
CLIP1-219ENST00000620786 SRRM4A7MD48 611 aaKnown RBP9.3□□□□□ -0.92
CLIP1-219ENST00000620786 F2Z2F3 143 aa9.3□□□□□ -0.92
CLIP1-219ENST00000620786 GFI1Q99684 422 aa9.3□□□□□ -0.92
CLIP1-219ENST00000620786 U3KQA8 63 aa9.3□□□□□ -0.92
CLIP1-219ENST00000620786 ZSWIM8A7E2V4 1837 aa9.3□□□□□ -0.92
CLIP1-219ENST00000620786 TICRRQ7Z2Z1 1910 aa9.3□□□□□ -0.92
CLIP1-219ENST00000620786 SNAI2O43623 268 aa9.3□□□□□ -0.92
CLIP1-219ENST00000620786 PRTN3P24158 256 aa9.3□□□□□ -0.92
CLIP1-219ENST00000620786 Q6P435 159 aa9.3□□□□□ -0.92
CLIP1-219ENST00000620786 LINC01619G3V211 115 aa9.3□□□□□ -0.92
CLIP1-219ENST00000620786 GATA4P43694 442 aa9.3□□□□□ -0.92
CLIP1-219ENST00000620786 TREML4Q6UXN2 200 aa9.3□□□□□ -0.92
CLIP1-219ENST00000620786 C9orf139Q6ZV77 190 aa9.3□□□□□ -0.92
CLIP1-219ENST00000620786 EXOC3-AS1Q8N2X6 119 aa9.3□□□□□ -0.92
CLIP1-219ENST00000620786 IGHV1-69DA0A0B4J2H0 117 aa9.29□□□□□ -0.92
CLIP1-219ENST00000620786 RNF222A6NCQ9 220 aa9.29□□□□□ -0.92
CLIP1-219ENST00000620786 IGHV1-69P01742 117 aa9.29□□□□□ -0.92
CLIP1-219ENST00000620786 HGFACQ04756 655 aa9.29□□□□□ -0.92
CLIP1-219ENST00000620786 TRGV9Q99603 122 aa9.29□□□□□ -0.92
CLIP1-219ENST00000620786 UBE2E1P51965 193 aa9.29□□□□□ -0.92
CLIP1-219ENST00000620786 CKS1BP61024 79 aa9.29□□□□□ -0.92
CLIP1-219ENST00000620786 FNDC1Q4ZHG4 1894 aaPredicted RBP9.29□□□□□ -0.92
CLIP1-219ENST00000620786 RHPN1-AS1Q9BWJ2 59 aa9.29□□□□□ -0.92
CLIP1-219ENST00000620786 SPTBP11277 2137 aa9.29□□□□□ -0.92
CLIP1-219ENST00000620786 RPL23P62829 140 aaKnown RBP9.29□□□□□ -0.92
CLIP1-219ENST00000620786 COQ2Q96H96 371 aa9.29□□□□□ -0.92
CLIP1-219ENST00000620786 RNF126Q9BV68 326 aa9.29□□□□□ -0.92
CLIP1-219ENST00000620786 RPL36AP83881 106 aaKnown RBP9.29□□□□□ -0.92
CLIP1-219ENST00000620786 IL17RELQ6ZVW7 336 aa9.29□□□□□ -0.92
CLIP1-219ENST00000620786 RPL36ALQ969Q0 106 aaKnown RBP9.29□□□□□ -0.92
CLIP1-219ENST00000620786 TSPAN13O95857 204 aa9.28□□□□□ -0.92
CLIP1-219ENST00000620786 ID3Q02535 119 aa9.28□□□□□ -0.92
CLIP1-219ENST00000620786 ORMDL2Q53FV1 153 aa9.28□□□□□ -0.92
CLIP1-219ENST00000620786 WDR83OSQ9Y284 106 aa9.28□□□□□ -0.92
CLIP1-219ENST00000620786 SPATA31B1PQ5VZV4 182 aa9.28□□□□□ -0.92
CLIP1-219ENST00000620786 RNF182Q8N6D2 247 aa9.28□□□□□ -0.92
CLIP1-219ENST00000620786 E9PQ18 207 aa9.28□□□□□ -0.92
CLIP1-219ENST00000620786 OVOL3O00110 214 aa9.28□□□□□ -0.92
CLIP1-219ENST00000620786 LCN12Q6JVE5 192 aa9.28□□□□□ -0.92
CLIP1-219ENST00000620786 FAM19A2Q8N3H0 131 aa9.28□□□□□ -0.92
CLIP1-219ENST00000620786 CHTOPQ9Y3Y2 248 aaKnown RBP9.28□□□□□ -0.92
CLIP1-219ENST00000620786 IGHV2-70DA0A0C4DH43 119 aa9.28□□□□□ -0.92
CLIP1-219ENST00000620786 APOMO95445 188 aa9.28□□□□□ -0.92
CLIP1-219ENST00000620786 ST6GALNAC6Q969X2 333 aa9.27□□□□□ -0.92
CLIP1-219ENST00000620786 DAZ1Q9NQZ3 744 aaKnown RBP9.27□□□□□ -0.92
CLIP1-219ENST00000620786 TDGF1P3P51864 188 aa9.27□□□□□ -0.93
CLIP1-219ENST00000620786 ZNF138P52744 262 aa9.27□□□□□ -0.93
CLIP1-219ENST00000620786 VSIRQ9H7M9 311 aa9.27□□□□□ -0.93
CLIP1-219ENST00000620786 WFDC1Q9HC57 220 aa9.27□□□□□ -0.93
CLIP1-219ENST00000620786 APC2O95996 2303 aa9.27□□□□□ -0.93
CLIP1-219ENST00000620786 IGHV3-64A0A075B6Q5 118 aa9.27□□□□□ -0.93
CLIP1-219ENST00000620786 DEFB130BP0DP73 79 aa9.27□□□□□ -0.93
CLIP1-219ENST00000620786 DEFB130AP0DP74 79 aa9.27□□□□□ -0.93
CLIP1-219ENST00000620786 LINC00158P58513 81 aa9.27□□□□□ -0.93
CLIP1-219ENST00000620786 IGFL4Q6B9Z1 124 aa9.27□□□□□ -0.93
CLIP1-219ENST00000620786 TOMM40O96008 361 aa9.27□□□□□ -0.93
CLIP1-219ENST00000620786 GGTLC1Q9BX51 225 aa9.27□□□□□ -0.93
CLIP1-219ENST00000620786 ARID1AO14497 2285 aa9.27□□□□□ -0.93
CLIP1-219ENST00000620786 TCF20Q9UGU0 1960 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms