RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 SS18Q15532 418 aa4.98□□□□□ -1.61
RFX3-212ENST00000617270 NABP1Q96AH0 204 aa4.98□□□□□ -1.61
RFX3-212ENST00000617270 THBDP07204 575 aa4.98□□□□□ -1.61
RFX3-212ENST00000617270 CRLF1O75462 422 aa4.98□□□□□ -1.61
RFX3-212ENST00000617270 FCN3O75636 299 aa4.98□□□□□ -1.61
RFX3-212ENST00000617270 SPATA31B1PQ5VZV4 182 aa4.98□□□□□ -1.61
RFX3-212ENST00000617270 SCN8AQ9UQD0 1980 aa4.98□□□□□ -1.61
RFX3-212ENST00000617270 ZNF561-AS1K7EIQ3 104 aa4.97□□□□□ -1.61
RFX3-212ENST00000617270 PSG3Q16557 428 aa4.97□□□□□ -1.61
RFX3-212ENST00000617270 IGFL4Q6B9Z1 124 aa4.97□□□□□ -1.61
RFX3-212ENST00000617270 LCN12Q6JVE5 192 aa4.97□□□□□ -1.61
RFX3-212ENST00000617270 CHAC1Q9BUX1 264 aa4.97□□□□□ -1.61
RFX3-212ENST00000617270 TM2D1Q9BX74 207 aa4.97□□□□□ -1.61
RFX3-212ENST00000617270 CHCHD2Q9Y6H1 151 aaPredicted RBP4.97□□□□□ -1.61
RFX3-212ENST00000617270 CKAP5Q14008 2032 aa4.97□□□□□ -1.61
RFX3-212ENST00000617270 SMKR1H3BMG3 65 aa4.97□□□□□ -1.61
RFX3-212ENST00000617270 SELLP14151 372 aa4.97□□□□□ -1.61
RFX3-212ENST00000617270 PMVKQ15126 192 aa4.97□□□□□ -1.61
RFX3-212ENST00000617270 MCRIP2Q9BUT9 160 aaKnown RBP4.97□□□□□ -1.61
RFX3-212ENST00000617270 ZNF319Q9P2F9 582 aa4.97□□□□□ -1.61
RFX3-212ENST00000617270 SCN1AP35498 2009 aa4.97□□□□□ -1.61
RFX3-212ENST00000617270 IGKV1D-43A0A0B4J1Z2 117 aa4.97□□□□□ -1.61
RFX3-212ENST00000617270 IGHV1-2P23083 117 aa4.97□□□□□ -1.61
RFX3-212ENST00000617270 TIMP3P35625 211 aa4.97□□□□□ -1.61
RFX3-212ENST00000617270 RASL11AQ6T310 242 aa4.97□□□□□ -1.61
RFX3-212ENST00000617270 C18orf12Q96KH6 178 aa4.97□□□□□ -1.61
RFX3-212ENST00000617270 LOC105371267A0A1B0GV96 52 aa4.97□□□□□ -1.61
RFX3-212ENST00000617270 AMBPP02760 352 aa4.97□□□□□ -1.61
RFX3-212ENST00000617270 SP9P0CG40 484 aa4.97□□□□□ -1.61
RFX3-212ENST00000617270 PFN2P35080 140 aa4.97□□□□□ -1.61
RFX3-212ENST00000617270 FAM90A1Q86YD7 464 aa4.97□□□□□ -1.61
RFX3-212ENST00000617270 TCF15Q12870 199 aa4.97□□□□□ -1.61
RFX3-212ENST00000617270 C10orf55Q5SWW7 151 aa4.97□□□□□ -1.61
RFX3-212ENST00000617270 TMEM158Q8WZ71 300 aa4.97□□□□□ -1.61
RFX3-212ENST00000617270 COLQQ9Y215 455 aaPredicted RBP4.97□□□□□ -1.61
RFX3-212ENST00000617270 TRBV6-7A0A0A0MS04 114 aa4.97□□□□□ -1.61
RFX3-212ENST00000617270 PRCDQ00LT1 54 aa4.97□□□□□ -1.61
RFX3-212ENST00000617270 TNFSF13O75888 250 aa4.97□□□□□ -1.61
RFX3-212ENST00000617270 ZNF138P52744 262 aa4.97□□□□□ -1.61
RFX3-212ENST00000617270 ZNF837Q96EG3 531 aaPredicted RBP4.97□□□□□ -1.61
RFX3-212ENST00000617270 GREM1O60565 184 aa4.96□□□□□ -1.61
RFX3-212ENST00000617270 SH2D1AO60880 128 aa4.96□□□□□ -1.61
RFX3-212ENST00000617270 ZC2HC1BQ5TFG8 222 aa4.96□□□□□ -1.61
RFX3-212ENST00000617270 SLC25A28Q96A46 364 aa4.96□□□□□ -1.61
RFX3-212ENST00000617270 IGHG3P01860 377 aa4.96□□□□□ -1.62
RFX3-212ENST00000617270 MORN2Q502X0 79 aa4.96□□□□□ -1.62
RFX3-212ENST00000617270 HIST3H2BBQ8N257 126 aa4.96□□□□□ -1.62
RFX3-212ENST00000617270 THAP8Q8NA92 274 aa4.96□□□□□ -1.62
RFX3-212ENST00000617270 C1QTNF5Q9BXJ0 243 aa4.96□□□□□ -1.62
RFX3-212ENST00000617270 SLC25A39Q9BZJ4 359 aaPredicted RBP4.96□□□□□ -1.62
RFX3-212ENST00000617270 CACNA1IQ9P0X4 2223 aa4.96□□□□□ -1.62
RFX3-212ENST00000617270 LINC01549A6NIU2 74 aa4.96□□□□□ -1.62
RFX3-212ENST00000617270 CFHR3Q02985 330 aa4.96□□□□□ -1.62
RFX3-212ENST00000617270 SPSB3Q6PJ21 355 aa4.96□□□□□ -1.62
RFX3-212ENST00000617270 LY6G5BQ8NDX9 201 aa4.96□□□□□ -1.62
RFX3-212ENST00000617270 HEATR1Q9H583 2144 aaKnown RBP4.96□□□□□ -1.62
RFX3-212ENST00000617270 LAMB1P07942 1786 aa4.96□□□□□ -1.62
RFX3-212ENST00000617270 VCYO14598 125 aa4.96□□□□□ -1.62
RFX3-212ENST00000617270 LOC102723996A0A087X1L8 192 aa4.96□□□□□ -1.62
RFX3-212ENST00000617270 MMP23AO75900 390 aa4.96□□□□□ -1.62
RFX3-212ENST00000617270 NXPH4O95158 308 aa4.96□□□□□ -1.62
RFX3-212ENST00000617270 CXCL1P09341 107 aa4.96□□□□□ -1.62
RFX3-212ENST00000617270 RPUSD1Q9UJJ7 312 aaKnown RBP4.96□□□□□ -1.62
RFX3-212ENST00000617270 NOTCH3Q9UM47 2321 aa4.96□□□□□ -1.62
RFX3-212ENST00000617270 MLNRO43193 412 aa4.96□□□□□ -1.62
RFX3-212ENST00000617270 MORN5Q5VZ52 161 aa4.96□□□□□ -1.62
RFX3-212ENST00000617270 VMO1Q7Z5L0 202 aa4.96□□□□□ -1.62
RFX3-212ENST00000617270 FBLIM1Q8WUP2 373 aa4.96□□□□□ -1.62
RFX3-212ENST00000617270 WFDC1Q9HC57 220 aa4.96□□□□□ -1.62
RFX3-212ENST00000617270 CDK5RAP2Q96SN8 1893 aa4.96□□□□□ -1.62
RFX3-212ENST00000617270 IQCF6A8MYZ5 107 aa4.96□□□□□ -1.62
RFX3-212ENST00000617270 INAFM2P0DMQ5 153 aa4.96□□□□□ -1.62
RFX3-212ENST00000617270 BMPERQ8N8U9 685 aa4.96□□□□□ -1.62
RFX3-212ENST00000617270 C9orf106Q8NAJ2 232 aa4.96□□□□□ -1.62
RFX3-212ENST00000617270 CACNA1SQ13698 1873 aa4.96□□□□□ -1.62
RFX3-212ENST00000617270 ARFGEF3Q5TH69 2177 aa4.96□□□□□ -1.62
RFX3-212ENST00000617270 SHISA3A0PJX4 238 aa4.95□□□□□ -1.62
RFX3-212ENST00000617270 UBE2CO00762 179 aa4.95□□□□□ -1.62
RFX3-212ENST00000617270 BRD3OSQ6XYD6 125 aa4.95□□□□□ -1.62
RFX3-212ENST00000617270 GAGE12BA1L429 117 aa4.95□□□□□ -1.62
RFX3-212ENST00000617270 IGFBP3P17936 291 aaPredicted RBP4.95□□□□□ -1.62
RFX3-212ENST00000617270 TREML4Q6UXN2 200 aa4.95□□□□□ -1.62
RFX3-212ENST00000617270 UBL5Q9BZL1 73 aa4.95□□□□□ -1.62
RFX3-212ENST00000617270 MBNL3Q9NUK0 354 aaKnown RBP4.95□□□□□ -1.62
RFX3-212ENST00000617270 MSRB2Q9Y3D2 182 aa4.95□□□□□ -1.62
RFX3-212ENST00000617270 C5orf67F2Z3F1 127 aa4.95□□□□□ -1.62
RFX3-212ENST00000617270 KLRD1Q13241 179 aa4.95□□□□□ -1.62
RFX3-212ENST00000617270 KLHL30-AS1Q8NEE0 82 aa4.95□□□□□ -1.62
RFX3-212ENST00000617270 MYO5AQ9Y4I1 1855 aaKnown RBP4.95□□□□□ -1.62
RFX3-212ENST00000617270 POLEQ07864 2286 aa4.95□□□□□ -1.62
RFX3-212ENST00000617270 RICTORQ6R327 1708 aa4.95□□□□□ -1.62
RFX3-212ENST00000617270 YPEL1O60688 119 aa4.95□□□□□ -1.62
RFX3-212ENST00000617270 YPEL2Q96QA6 119 aa4.95□□□□□ -1.62
RFX3-212ENST00000617270 F5H768 121 aa4.95□□□□□ -1.62
RFX3-212ENST00000617270 DLEU1O43261 78 aa4.95□□□□□ -1.62
RFX3-212ENST00000617270 LINC01559Q495D7 138 aa4.95□□□□□ -1.62
RFX3-212ENST00000617270 MIA3Q5JRA6 1907 aa4.95□□□□□ -1.62
RFX3-212ENST00000617270 RS1O15537 224 aa4.95□□□□□ -1.62
RFX3-212ENST00000617270 TRACP01848 142 aa4.95□□□□□ -1.62
RFX3-212ENST00000617270 ZNF362Q5T0B9 420 aaPredicted RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms