RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 CRIM1Q9NZV1 1036 aa12.44□□□□□ -0.42
ITGB4-206ENST00000579662 ATRAIDQ6UW56 229 aa12.44□□□□□ -0.42
ITGB4-206ENST00000579662 SIGLEC9Q9Y336 463 aa12.44□□□□□ -0.42
ITGB4-206ENST00000579662 ADMP35318 185 aa12.44□□□□□ -0.42
ITGB4-206ENST00000579662 GLMPQ8WWB7 406 aa12.44□□□□□ -0.42
ITGB4-206ENST00000579662 NCOR1P1Q9H4R4 102 aa12.44□□□□□ -0.42
ITGB4-206ENST00000579662 TRAV5A0A0B4J249 113 aa12.43□□□□□ -0.42
ITGB4-206ENST00000579662 LINC01549A6NIU2 74 aa12.43□□□□□ -0.42
ITGB4-206ENST00000579662 COL8A2P25067 703 aa12.43□□□□□ -0.42
ITGB4-206ENST00000579662 GATA4P43694 442 aa12.43□□□□□ -0.42
ITGB4-206ENST00000579662 SRSF1Q07955 248 aaKnown RBP eCLIP12.43□□□□□ -0.42
ITGB4-206ENST00000579662 TPRP12270 2363 aaKnown RBP12.43□□□□□ -0.42
ITGB4-206ENST00000579662 TRAV3A0A0B4J244 114 aa12.43□□□□□ -0.42
ITGB4-206ENST00000579662 LYL1P12980 280 aa12.43□□□□□ -0.42
ITGB4-206ENST00000579662 PROK2Q9HC23 129 aa12.43□□□□□ -0.42
ITGB4-206ENST00000579662 PTPRDP23468 1912 aa12.43□□□□□ -0.42
ITGB4-206ENST00000579662 PLP1P60201 277 aa12.43□□□□□ -0.42
ITGB4-206ENST00000579662 GTSCR1Q86UQ5 136 aa12.43□□□□□ -0.42
ITGB4-206ENST00000579662 LINC01356Q8N9X3 169 aa12.43□□□□□ -0.42
ITGB4-206ENST00000579662 PRTN3P24158 256 aa12.43□□□□□ -0.42
ITGB4-206ENST00000579662 C9orf139Q6ZV77 190 aa12.43□□□□□ -0.42
ITGB4-206ENST00000579662 H3BUX3 64 aa12.43□□□□□ -0.42
ITGB4-206ENST00000579662 COTL1Q14019 142 aa12.43□□□□□ -0.42
ITGB4-206ENST00000579662 ORMDL2Q53FV1 153 aa12.43□□□□□ -0.42
ITGB4-206ENST00000579662 SERF1AO75920 110 aa12.42□□□□□ -0.42
ITGB4-206ENST00000579662 IFI27P40305 119 aaPredicted RBP12.42□□□□□ -0.42
ITGB4-206ENST00000579662 TMEM219Q86XT9 240 aa12.42□□□□□ -0.42
ITGB4-206ENST00000579662 HBDP02042 147 aa12.42□□□□□ -0.42
ITGB4-206ENST00000579662 FBLN7Q53RD9 439 aa12.42□□□□□ -0.42
ITGB4-206ENST00000579662 LYPD2Q6UXB3 125 aa12.42□□□□□ -0.42
ITGB4-206ENST00000579662 BEND2Q8NDZ0 799 aa12.42□□□□□ -0.42
ITGB4-206ENST00000579662 PRDM13Q9H4Q3 707 aa12.42□□□□□ -0.42
ITGB4-206ENST00000579662 LY96Q9Y6Y9 160 aa12.42□□□□□ -0.42
ITGB4-206ENST00000579662 GATA3P23771 443 aa12.42□□□□□ -0.42
ITGB4-206ENST00000579662 LMO1P25800 156 aa12.42□□□□□ -0.42
ITGB4-206ENST00000579662 CHCHD1Q96BP2 118 aaKnown RBP12.42□□□□□ -0.42
ITGB4-206ENST00000579662 HEATR5BQ9P2D3 2071 aa12.41□□□□□ -0.42
ITGB4-206ENST00000579662 LYPD1Q8N2G4 141 aa12.41□□□□□ -0.42
ITGB4-206ENST00000579662 PEF1Q9UBV8 284 aaKnown RBP12.41□□□□□ -0.42
ITGB4-206ENST00000579662 CACNA1EQ15878 2313 aa12.41□□□□□ -0.42
ITGB4-206ENST00000579662 CEACAM8P31997 349 aaPredicted RBP12.41□□□□□ -0.42
ITGB4-206ENST00000579662 KIF26BQ2KJY2 2108 aa12.41□□□□□ -0.42
ITGB4-206ENST00000579662 PMS2P5A8MQ11 134 aa12.41□□□□□ -0.42
ITGB4-206ENST00000579662 TOMM40O96008 361 aa12.41□□□□□ -0.42
ITGB4-206ENST00000579662 SPATA31B1PQ5VZV4 182 aa12.41□□□□□ -0.42
ITGB4-206ENST00000579662 RASL11AQ6T310 242 aa12.41□□□□□ -0.42
ITGB4-206ENST00000579662 DTX1Q86Y01 620 aa12.41□□□□□ -0.42
ITGB4-206ENST00000579662 SCRT1Q9BWW7 348 aa12.41□□□□□ -0.42
ITGB4-206ENST00000579662 NRN1Q9NPD7 142 aa12.41□□□□□ -0.42
ITGB4-206ENST00000579662 LINC00527Q9UJ94 153 aa12.41□□□□□ -0.42
ITGB4-206ENST00000579662 WDR81Q562E7 1941 aa12.41□□□□□ -0.42
ITGB4-206ENST00000579662 PLXNA2O75051 1894 aa12.41□□□□□ -0.42
ITGB4-206ENST00000579662 ALPK2Q86TB3 2170 aa12.4□□□□□ -0.42
ITGB4-206ENST00000579662 SSBP4Q9BWG4 385 aaPredicted RBP12.4□□□□□ -0.42
ITGB4-206ENST00000579662 DNAL4O96015 105 aa12.4□□□□□ -0.42
ITGB4-206ENST00000579662 NUDT10Q8NFP7 164 aa12.4□□□□□ -0.42
ITGB4-206ENST00000579662 NUDT11Q96G61 164 aa12.4□□□□□ -0.42
ITGB4-206ENST00000579662 AGMATQ9BSE5 352 aa12.4□□□□□ -0.42
ITGB4-206ENST00000579662 CYSLTR1Q9Y271 337 aa12.4□□□□□ -0.42
ITGB4-206ENST00000579662 TRBV24-1A0A075B6N3 115 aa12.4□□□□□ -0.42
ITGB4-206ENST00000579662 TCRAP04437 139 aa12.4□□□□□ -0.43
ITGB4-206ENST00000579662 EMP1P54849 157 aa12.4□□□□□ -0.43
ITGB4-206ENST00000579662 LINC01559Q495D7 138 aa12.4□□□□□ -0.43
ITGB4-206ENST00000579662 FAM19A2Q8N3H0 131 aa12.4□□□□□ -0.43
ITGB4-206ENST00000579662 FREM3P0C091 2139 aa12.39□□□□□ -0.43
ITGB4-206ENST00000579662 LINC00614P0C842 121 aa12.39□□□□□ -0.43
ITGB4-206ENST00000579662 RPP25LQ8N5L8 163 aaKnown RBP12.39□□□□□ -0.43
ITGB4-206ENST00000579662 OR13C6PQ8NH95 151 aa12.39□□□□□ -0.43
ITGB4-206ENST00000579662 VCX2Q9H322 139 aa12.39□□□□□ -0.43
ITGB4-206ENST00000579662 FOXL1Q12952 345 aa12.39□□□□□ -0.43
ITGB4-206ENST00000579662 BPESC1Q9GZL8 116 aa12.39□□□□□ -0.43
ITGB4-206ENST00000579662 ZNF581Q9P0T4 197 aa12.39□□□□□ -0.43
ITGB4-206ENST00000579662 FRMPD3Q5JV73 1810 aa12.39□□□□□ -0.43
ITGB4-206ENST00000579662 C15orf62A8K5M9 175 aa12.39□□□□□ -0.43
ITGB4-206ENST00000579662 CTAG1AP78358 180 aa12.39□□□□□ -0.43
ITGB4-206ENST00000579662 NSUN5P1Q3KNT7 163 aa12.39□□□□□ -0.43
ITGB4-206ENST00000579662 CFAP161Q6P656 301 aa12.39□□□□□ -0.43
ITGB4-206ENST00000579662 SSC4DQ8WTU2 575 aa12.39□□□□□ -0.43
ITGB4-206ENST00000579662 SEPSECSQ9HD40 501 aaKnown RBP12.39□□□□□ -0.43
ITGB4-206ENST00000579662 RNASE2P10153 161 aaKnown RBP12.39□□□□□ -0.43
ITGB4-206ENST00000579662 BRD3OSQ6XYD6 125 aa12.39□□□□□ -0.43
ITGB4-206ENST00000579662 ARL6IP6Q8N6S5 226 aa12.39□□□□□ -0.43
ITGB4-206ENST00000579662 ANAPC10Q9UM13 185 aa12.39□□□□□ -0.43
ITGB4-206ENST00000579662 PGPEP1LA6NFU8 196 aa12.38□□□□□ -0.43
ITGB4-206ENST00000579662 TNFSF13O75888 250 aa12.38□□□□□ -0.43
ITGB4-206ENST00000579662 RPL15P61313 204 aaKnown RBP12.38□□□□□ -0.43
ITGB4-206ENST00000579662 NBL1P41271 181 aa12.38□□□□□ -0.43
ITGB4-206ENST00000579662 NTF4P34130 210 aa12.38□□□□□ -0.43
ITGB4-206ENST00000579662 PIP4P1Q86T03 277 aa12.38□□□□□ -0.43
ITGB4-206ENST00000579662 C1QL4Q86Z23 238 aa12.38□□□□□ -0.43
ITGB4-206ENST00000579662 IGKV2-40A0A087WW87 121 aaPredicted RBP12.37□□□□□ -0.43
ITGB4-206ENST00000579662 IGKV2D-40P01614 121 aaPredicted RBP12.37□□□□□ -0.43
ITGB4-206ENST00000579662 ZNF138P52744 262 aa12.37□□□□□ -0.43
ITGB4-206ENST00000579662 LINC00477Q96M19 166 aa12.37□□□□□ -0.43
ITGB4-206ENST00000579662 CNTFRP26992 372 aa12.37□□□□□ -0.43
ITGB4-206ENST00000579662 MRPL16Q9NX20 251 aaKnown RBP12.37□□□□□ -0.43
ITGB4-206ENST00000579662 SDK2Q58EX2 2172 aa12.37□□□□□ -0.43
ITGB4-206ENST00000579662 NDUFA3O95167 84 aa12.37□□□□□ -0.43
ITGB4-206ENST00000579662 UBE2E1P51965 193 aa12.37□□□□□ -0.43
ITGB4-206ENST00000579662 DPH3Q96FX2 82 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms