RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 TEX45Q8NA69 505 aa10.34□□□□□ -0.75
SMAD3-214ENST00000560402 SLC24A4Q8NFF2 622 aa10.34□□□□□ -0.75
SMAD3-214ENST00000560402 OR1L8Q8NGR8 309 aa10.34□□□□□ -0.75
SMAD3-214ENST00000560402 HINT2Q9BX68 163 aa10.34□□□□□ -0.75
SMAD3-214ENST00000560402 SH3BGRL3Q9H299 93 aa10.34□□□□□ -0.75
SMAD3-214ENST00000560402 TREM1Q9NP99 234 aa10.34□□□□□ -0.75
SMAD3-214ENST00000560402 PEMTQ9UBM1 199 aa10.34□□□□□ -0.75
SMAD3-214ENST00000560402 TNCP24821 2201 aa10.33□□□□□ -0.76
SMAD3-214ENST00000560402 LCE6AA0A183 80 aa10.33□□□□□ -0.76
SMAD3-214ENST00000560402 FAM223BA6NKX1 122 aa10.33□□□□□ -0.76
SMAD3-214ENST00000560402 ACTL6BO94805 426 aa10.33□□□□□ -0.76
SMAD3-214ENST00000560402 SAA1P0DJI8 122 aaPredicted RBP10.33□□□□□ -0.76
SMAD3-214ENST00000560402 SUB1P53999 127 aaKnown RBP eCLIP10.33□□□□□ -0.76
SMAD3-214ENST00000560402 SYNJ2BPP57105 145 aa10.33□□□□□ -0.76
SMAD3-214ENST00000560402 RPL8P62917 257 aaKnown RBP10.33□□□□□ -0.76
SMAD3-214ENST00000560402 DLK1P80370 383 aa10.33□□□□□ -0.76
SMAD3-214ENST00000560402 ERHP84090 104 aaKnown RBP10.33□□□□□ -0.76
SMAD3-214ENST00000560402 RAB31Q13636 194 aa10.33□□□□□ -0.76
SMAD3-214ENST00000560402 RPEL1Q2QD12 228 aa10.33□□□□□ -0.76
SMAD3-214ENST00000560402 BTNL8Q6UX41 500 aa10.33□□□□□ -0.76
SMAD3-214ENST00000560402 FAM223AQ8IWN6 122 aa10.33□□□□□ -0.76
SMAD3-214ENST00000560402 TMEM167AQ8TBQ9 72 aa10.33□□□□□ -0.76
SMAD3-214ENST00000560402 EDA2RQ9HAV5 297 aa10.33□□□□□ -0.76
SMAD3-214ENST00000560402 C15orf62A8K5M9 175 aa10.32□□□□□ -0.76
SMAD3-214ENST00000560402 H2AFB1P0C5Y9 115 aa10.32□□□□□ -0.76
SMAD3-214ENST00000560402 FGF7P21781 194 aa10.32□□□□□ -0.76
SMAD3-214ENST00000560402 MAS1LP35410 378 aa10.32□□□□□ -0.76
SMAD3-214ENST00000560402 SNCAP37840 140 aa10.32□□□□□ -0.76
SMAD3-214ENST00000560402 TNXAQ16473 311 aa10.32□□□□□ -0.76
SMAD3-214ENST00000560402 PRSS8Q16651 343 aa10.32□□□□□ -0.76
SMAD3-214ENST00000560402 VWC2Q2TAL6 325 aa10.32□□□□□ -0.76
SMAD3-214ENST00000560402 SPINK9Q5DT21 86 aa10.32□□□□□ -0.76
SMAD3-214ENST00000560402 SRSF12Q8WXF0 261 aaKnown RBP10.32□□□□□ -0.76
SMAD3-214ENST00000560402 SMDT1Q9H4I9 107 aa10.32□□□□□ -0.76
SMAD3-214ENST00000560402 TENM2Q9NT68 2774 aa10.31□□□□□ -0.76
SMAD3-214ENST00000560402 SMCO3A2RU48 225 aa10.31□□□□□ -0.76
SMAD3-214ENST00000560402 FNDC10F2Z333 226 aa10.31□□□□□ -0.76
SMAD3-214ENST00000560402 IFNA1P01562 189 aa10.31□□□□□ -0.76
SMAD3-214ENST00000560402 IL6RP08887 468 aaPredicted RBP10.31□□□□□ -0.76
SMAD3-214ENST00000560402 TMEM41BQ5BJD5 291 aa10.31□□□□□ -0.76
SMAD3-214ENST00000560402 MMD2Q8IY49 270 aa10.31□□□□□ -0.76
SMAD3-214ENST00000560402 LYPD6BQ8NI32 183 aa10.31□□□□□ -0.76
SMAD3-214ENST00000560402 TRAV3A0A0B4J244 114 aa10.3□□□□□ -0.76
SMAD3-214ENST00000560402 SRRM4A7MD48 611 aaKnown RBP10.3□□□□□ -0.76
SMAD3-214ENST00000560402 TRBV12-3P01733 135 aa10.3□□□□□ -0.76
SMAD3-214ENST00000560402 CSN3P07498 182 aa10.3□□□□□ -0.76
SMAD3-214ENST00000560402 DEFA5Q01523 94 aa10.3□□□□□ -0.76
SMAD3-214ENST00000560402 ARL16Q0P5N6 197 aa10.3□□□□□ -0.76
SMAD3-214ENST00000560402 MRGPRG-AS1Q2M3A8 158 aa10.3□□□□□ -0.76
SMAD3-214ENST00000560402 BPIFCQ8NFQ6 507 aa10.3□□□□□ -0.76
SMAD3-214ENST00000560402 TUBA4BQ9H853 241 aa10.3□□□□□ -0.76
SMAD3-214ENST00000560402 TRBV9A0A0B4J1U6 114 aa10.29□□□□□ -0.76
SMAD3-214ENST00000560402 TEX50A0A1B0GTY4 177 aa10.29□□□□□ -0.76
SMAD3-214ENST00000560402 TMEM218A2RU14 115 aa10.29□□□□□ -0.76
SMAD3-214ENST00000560402 PMS2P5A8MQ11 134 aa10.29□□□□□ -0.76
SMAD3-214ENST00000560402 INS-IGF2F8WCM5 200 aa10.29□□□□□ -0.76
SMAD3-214ENST00000560402 RHOGP84095 191 aa10.29□□□□□ -0.76
SMAD3-214ENST00000560402 HAGHQ16775 308 aa10.29□□□□□ -0.76
SMAD3-214ENST00000560402 ACOT6Q3I5F7 207 aaPredicted RBP10.29□□□□□ -0.76
SMAD3-214ENST00000560402 LINC00052Q96N35 136 aa10.29□□□□□ -0.76
SMAD3-214ENST00000560402 RSG1Q9BU20 258 aa10.29□□□□□ -0.76
SMAD3-214ENST00000560402 EIF5A2Q9GZV4 153 aaKnown RBP10.29□□□□□ -0.76
SMAD3-214ENST00000560402 WDR83OSQ9Y284 106 aa10.29□□□□□ -0.76
SMAD3-214ENST00000560402 TRAV1-1A0A0B4J248 108 aa10.28□□□□□ -0.76
SMAD3-214ENST00000560402 A0A1B0GW64 132 aa10.28□□□□□ -0.76
SMAD3-214ENST00000560402 F8W036 122 aa10.28□□□□□ -0.76
SMAD3-214ENST00000560402 BMPR1BO00238 502 aa10.28□□□□□ -0.76
SMAD3-214ENST00000560402 AGPAT2O15120 278 aa10.28□□□□□ -0.76
SMAD3-214ENST00000560402 CYB5BO43169 146 aa10.28□□□□□ -0.76
SMAD3-214ENST00000560402 APOC3P02656 99 aa10.28□□□□□ -0.76
SMAD3-214ENST00000560402 APELAP0DMC3 54 aa10.28□□□□□ -0.76
SMAD3-214ENST00000560402 AKR1C1Q04828 323 aa10.28□□□□□ -0.76
SMAD3-214ENST00000560402 ATP5G2Q06055 141 aa10.28□□□□□ -0.76
SMAD3-214ENST00000560402 GUK1Q16774 197 aa10.28□□□□□ -0.76
SMAD3-214ENST00000560402 C2orf83Q53S99 150 aa10.28□□□□□ -0.76
SMAD3-214ENST00000560402 ZFAND6Q6FIF0 208 aa10.28□□□□□ -0.76
SMAD3-214ENST00000560402 SVBPQ8N300 66 aa10.28□□□□□ -0.76
SMAD3-214ENST00000560402 TTC9CQ8N5M4 171 aa10.28□□□□□ -0.76
SMAD3-214ENST00000560402 NECAP1Q8NC96 275 aa10.28□□□□□ -0.76
SMAD3-214ENST00000560402 DYNLRB2Q8TF09 96 aa10.28□□□□□ -0.76
SMAD3-214ENST00000560402 NPCDR1Q9BY65 106 aa10.28□□□□□ -0.76
SMAD3-214ENST00000560402 ACTR3CQ9C0K3 210 aaPredicted RBP10.28□□□□□ -0.76
SMAD3-214ENST00000560402 ZNF430Q9H8G1 570 aaPredicted RBP10.28□□□□□ -0.76
SMAD3-214ENST00000560402 NPVFQ9HCQ7 196 aa10.28□□□□□ -0.76
SMAD3-214ENST00000560402 DNAH1Q9P2D7 4330 aa10.27□□□□□ -0.76
SMAD3-214ENST00000560402 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.27□□□□□ -0.77
SMAD3-214ENST00000560402 TAGLN2P37802 199 aaKnown RBP10.27□□□□□ -0.77
SMAD3-214ENST00000560402 ELLP55199 621 aaPredicted RBP10.27□□□□□ -0.77
SMAD3-214ENST00000560402 FFAR4Q5NUL3 377 aa10.27□□□□□ -0.77
SMAD3-214ENST00000560402 IL17DQ8TAD2 202 aa10.27□□□□□ -0.77
SMAD3-214ENST00000560402 SFT2D1Q8WV19 159 aa10.27□□□□□ -0.77
SMAD3-214ENST00000560402 SEC11CQ9BY50 192 aa10.27□□□□□ -0.77
SMAD3-214ENST00000560402 NDUFA4L2Q9NRX3 87 aa10.27□□□□□ -0.77
SMAD3-214ENST00000560402 SLC39A9Q9NUM3 307 aa10.27□□□□□ -0.77
SMAD3-214ENST00000560402 PLA2G2EQ9NZK7 142 aa10.27□□□□□ -0.77
SMAD3-214ENST00000560402 CTXND1A0A1B0GTU2 59 aa10.26□□□□□ -0.77
SMAD3-214ENST00000560402 CORTO00230 105 aa10.26□□□□□ -0.77
SMAD3-214ENST00000560402 OPRK1P41145 380 aa10.26□□□□□ -0.77
SMAD3-214ENST00000560402 RPL27AP46776 148 aaKnown RBP10.26□□□□□ -0.77
SMAD3-214ENST00000560402 FHITP49789 147 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms