RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 KLF14Q8TD94 323 aaPredicted RBP4.04□□□□□ -1.76
LMO3-229ENST00000543721 GTSF1Q8WW33 167 aa4.04□□□□□ -1.76
LMO3-229ENST00000543721 MRAP2Q96G30 205 aa4.04□□□□□ -1.76
LMO3-229ENST00000543721 ZNF48Q96MX3 618 aaPredicted RBP4.04□□□□□ -1.76
LMO3-229ENST00000543721 VCX2Q9H322 139 aa4.04□□□□□ -1.76
LMO3-229ENST00000543721 THYN1Q9P016 225 aa4.04□□□□□ -1.76
LMO3-229ENST00000543721 R4GN57 208 aa4.04□□□□□ -1.76
LMO3-229ENST00000543721 GON4LQ3T8J9 2241 aa4.04□□□□□ -1.76
LMO3-229ENST00000543721 CEP350Q5VT06 3117 aa4.04□□□□□ -1.76
LMO3-229ENST00000543721 TRAV5A0A0B4J249 113 aa4.04□□□□□ -1.76
LMO3-229ENST00000543721 HBDP02042 147 aa4.04□□□□□ -1.76
LMO3-229ENST00000543721 PYYP10082 97 aa4.04□□□□□ -1.76
LMO3-229ENST00000543721 HLA-DRB4P13762 266 aa4.04□□□□□ -1.76
LMO3-229ENST00000543721 SPINK2P20155 84 aa4.04□□□□□ -1.76
LMO3-229ENST00000543721 ZNF137PP52743 207 aa4.04□□□□□ -1.76
LMO3-229ENST00000543721 SMAGPQ0VAQ4 97 aa4.04□□□□□ -1.76
LMO3-229ENST00000543721 Q6ZR03 302 aa4.04□□□□□ -1.76
LMO3-229ENST00000543721 ZNF826PQ6ZT77 177 aa4.04□□□□□ -1.76
LMO3-229ENST00000543721 UBALD2Q8IYN6 164 aa4.04□□□□□ -1.76
LMO3-229ENST00000543721 ZNF414Q96IQ9 312 aa4.04□□□□□ -1.76
LMO3-229ENST00000543721 FER1L6-AS2Q96M78 137 aa4.04□□□□□ -1.76
LMO3-229ENST00000543721 OTORQ9NRC9 128 aa4.04□□□□□ -1.76
LMO3-229ENST00000543721 PGPEP1Q9NXJ5 209 aa4.04□□□□□ -1.76
LMO3-229ENST00000543721 HLA-DRB4X5D2U9 266 aa4.04□□□□□ -1.76
LMO3-229ENST00000543721 NCKAP5O14513 1909 aa4.04□□□□□ -1.76
LMO3-229ENST00000543721 MED12LQ86YW9 2145 aa4.04□□□□□ -1.76
LMO3-229ENST00000543721 ASCC3Q8N3C0 2202 aaKnown RBP4.04□□□□□ -1.76
LMO3-229ENST00000543721 PTPRBP23467 1997 aa4.03□□□□□ -1.76
LMO3-229ENST00000543721 TEX48A0A1B0GUV7 120 aa4.03□□□□□ -1.76
LMO3-229ENST00000543721 TCRAP04437 139 aa4.03□□□□□ -1.76
LMO3-229ENST00000543721 CSN3P07498 182 aa4.03□□□□□ -1.76
LMO3-229ENST00000543721 VEGFBP49765 207 aa4.03□□□□□ -1.76
LMO3-229ENST00000543721 SRSF6Q13247 344 aaKnown RBP4.03□□□□□ -1.76
LMO3-229ENST00000543721 PPP1R32Q7Z5V6 425 aa4.03□□□□□ -1.76
LMO3-229ENST00000543721 CD177Q8N6Q3 437 aa4.03□□□□□ -1.76
LMO3-229ENST00000543721 ZNF502Q8TBZ5 544 aa4.03□□□□□ -1.76
LMO3-229ENST00000543721 RAB37Q96AX2 223 aa4.03□□□□□ -1.76
LMO3-229ENST00000543721 GTSF1LQ9H1H1 148 aa4.03□□□□□ -1.76
LMO3-229ENST00000543721 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.03□□□□□ -1.76
LMO3-229ENST00000543721 SRRM5B3KS81 715 aa4.03□□□□□ -1.76
LMO3-229ENST00000543721 ZNHIT1O43257 154 aa4.03□□□□□ -1.76
LMO3-229ENST00000543721 SAA2P0DJI9 122 aaPredicted RBP4.03□□□□□ -1.76
LMO3-229ENST00000543721 ZNF493Q6ZR52 646 aa4.03□□□□□ -1.76
LMO3-229ENST00000543721 Q6ZS92 163 aa4.03□□□□□ -1.76
LMO3-229ENST00000543721 LINC00305Q7Z4B0 112 aa4.03□□□□□ -1.76
LMO3-229ENST00000543721 ZCCHC24Q8N2G6 241 aaKnown RBP4.03□□□□□ -1.76
LMO3-229ENST00000543721 OR8A1Q8NGG7 326 aa4.03□□□□□ -1.76
LMO3-229ENST00000543721 ITLN1Q8WWA0 313 aa4.03□□□□□ -1.76
LMO3-229ENST00000543721 IFI27L1Q96BM0 104 aa4.03□□□□□ -1.76
LMO3-229ENST00000543721 ABHD17AQ96GS6 310 aa4.03□□□□□ -1.76
LMO3-229ENST00000543721 TP73-AS1Q9UF72 201 aa4.03□□□□□ -1.76
LMO3-229ENST00000543721 HILPDAQ9Y5L2 63 aa4.03□□□□□ -1.76
LMO3-229ENST00000543721 TET2Q6N021 2002 aaPredicted RBP4.03□□□□□ -1.76
LMO3-229ENST00000543721 KBTBD11-OT1A0A1B0GTJ5 212 aa4.03□□□□□ -1.76
LMO3-229ENST00000543721 TM4SF5O14894 197 aa4.03□□□□□ -1.76
LMO3-229ENST00000543721 CGB3P0DN86 165 aa4.03□□□□□ -1.76
LMO3-229ENST00000543721 CGB7P0DN87 165 aa4.03□□□□□ -1.76
LMO3-229ENST00000543721 LCNL1Q6ZST4 164 aa4.03□□□□□ -1.76
LMO3-229ENST00000543721 TRGV9Q99603 122 aa4.03□□□□□ -1.76
LMO3-229ENST00000543721 NDUFA4L2Q9NRX3 87 aa4.03□□□□□ -1.76
LMO3-229ENST00000543721 PILRBQ9UKJ0 227 aa4.03□□□□□ -1.76
LMO3-229ENST00000543721 TIMM8BQ9Y5J9 83 aaPredicted RBP4.03□□□□□ -1.76
LMO3-229ENST00000543721 TSSC4Q9Y5U2 329 aaPredicted RBP4.03□□□□□ -1.76
LMO3-229ENST00000543721 CACNA1DQ01668 2161 aa4.03□□□□□ -1.76
LMO3-229ENST00000543721 PPIAL4EA0A075B759 164 aa4.02□□□□□ -1.77
LMO3-229ENST00000543721 PINLYPA6NC86 204 aa4.02□□□□□ -1.77
LMO3-229ENST00000543721 SNAI2O43623 268 aa4.02□□□□□ -1.77
LMO3-229ENST00000543721 PPIAL4FP0DN26 164 aa4.02□□□□□ -1.77
LMO3-229ENST00000543721 RAB9AP51151 201 aa4.02□□□□□ -1.77
LMO3-229ENST00000543721 ZNF134P52741 427 aa4.02□□□□□ -1.77
LMO3-229ENST00000543721 GNG5P63218 68 aa4.02□□□□□ -1.77
LMO3-229ENST00000543721 ALKBH6Q3KRA9 238 aa4.02□□□□□ -1.77
LMO3-229ENST00000543721 S100A7AQ86SG5 101 aa4.02□□□□□ -1.77
LMO3-229ENST00000543721 Q86TA4 180 aa4.02□□□□□ -1.77
LMO3-229ENST00000543721 ORMDL3Q8N138 153 aa4.02□□□□□ -1.77
LMO3-229ENST00000543721 SMRP1Q8NCR6 262 aa4.02□□□□□ -1.77
LMO3-229ENST00000543721 NPIPB3Q92617 1050 aa4.02□□□□□ -1.77
LMO3-229ENST00000543721 DCTN5Q9BTE1 182 aa4.02□□□□□ -1.77
LMO3-229ENST00000543721 Q9H3A6 140 aa4.02□□□□□ -1.77
LMO3-229ENST00000543721 ZFAND3Q9H8U3 227 aa4.02□□□□□ -1.77
LMO3-229ENST00000543721 KLF13Q9Y2Y9 288 aaPredicted RBP4.02□□□□□ -1.77
LMO3-229ENST00000543721 SDK1Q7Z5N4 2213 aa4.02□□□□□ -1.77
LMO3-229ENST00000543721 THBDP07204 575 aa4.02□□□□□ -1.77
LMO3-229ENST00000543721 GCSHP23434 173 aa4.02□□□□□ -1.77
LMO3-229ENST00000543721 CACNG7P62955 275 aa4.02□□□□□ -1.77
LMO3-229ENST00000543721 MBNL2Q5VZF2 373 aaKnown RBP4.02□□□□□ -1.77
LMO3-229ENST00000543721 PATE2Q6UY27 113 aa4.02□□□□□ -1.77
LMO3-229ENST00000543721 CXorf67Q86X51 503 aaPredicted RBP4.02□□□□□ -1.77
LMO3-229ENST00000543721 BCL6BQ8N143 479 aaPredicted RBP4.02□□□□□ -1.77
LMO3-229ENST00000543721 C1orf162Q8NEQ5 155 aaPredicted RBP4.02□□□□□ -1.77
LMO3-229ENST00000543721 C8orf46Q8TAG6 207 aa4.02□□□□□ -1.77
LMO3-229ENST00000543721 TMEM167AQ8TBQ9 72 aa4.02□□□□□ -1.77
LMO3-229ENST00000543721 TM2D2Q9BX73 214 aa4.02□□□□□ -1.77
LMO3-229ENST00000543721 SPANXB1Q9NS25 103 aaPredicted RBP4.02□□□□□ -1.77
LMO3-229ENST00000543721 MRPL16Q9NX20 251 aaKnown RBP4.02□□□□□ -1.77
LMO3-229ENST00000543721 TMEM14CQ9P0S9 112 aa4.02□□□□□ -1.77
LMO3-229ENST00000543721 U3KQK5 164 aa4.02□□□□□ -1.77
LMO3-229ENST00000543721 CNTRLQ7Z7A1 2325 aa4.02□□□□□ -1.77
LMO3-229ENST00000543721 CABIN1Q9Y6J0 2220 aa4.02□□□□□ -1.77
LMO3-229ENST00000543721 LY6G6EA0A0G2JKS1 128 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms