RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 KLRC4-KLRK1H3BQV0 150 aa15.01□□□□□ -0.01
SFSWAP-207ENST00000538548 HOXC12P31275 282 aa15.01□□□□□ -0.01
SFSWAP-207ENST00000538548 ZNF138P52744 262 aa15.01□□□□□ -0.01
SFSWAP-207ENST00000538548 STXBP6Q8NFX7 210 aa15.01□□□□□ -0.01
SFSWAP-207ENST00000538548 OR2Z1Q8NG97 314 aa15.01□□□□□ -0.01
SFSWAP-207ENST00000538548 SPRR3Q9UBC9 169 aa15.01□□□□□ -0.01
SFSWAP-207ENST00000538548 TCRBV4S1A1TA0A5B7 111 aa15□□□□□ -0.01
SFSWAP-207ENST00000538548 CIDEAO60543 219 aa15□□□□□ -0.01
SFSWAP-207ENST00000538548 SAA1P0DJI8 122 aaPredicted RBP15□□□□□ -0.01
SFSWAP-207ENST00000538548 CFHR2P36980 270 aa15□□□□□ -0.01
SFSWAP-207ENST00000538548 ERHP84090 104 aaKnown RBP15□□□□□ -0.01
SFSWAP-207ENST00000538548 PAX2Q02962 417 aa15□□□□□ -0.01
SFSWAP-207ENST00000538548 PEAR1Q5VY43 1037 aaPredicted RBP15□□□□□ -0.01
SFSWAP-207ENST00000538548 MBNL2Q5VZF2 373 aaKnown RBP15□□□□□ -0.01
SFSWAP-207ENST00000538548 Q6ZT83 130 aa15□□□□□ -0.01
SFSWAP-207ENST00000538548 ZC2HC1AQ96GY0 325 aa15□□□□□ -0.01
SFSWAP-207ENST00000538548 AP1S3Q96PC3 154 aa15□□□□□ -0.01
SFSWAP-207ENST00000538548 GVINP1Q7Z2Y8 2422 aa15□□□□□ -0.01
SFSWAP-207ENST00000538548 C9orf118A6NHY6 69 aa15□□□□□ -0.01
SFSWAP-207ENST00000538548 LTAP01374 205 aa15□□□□□ -0.01
SFSWAP-207ENST00000538548 NEU4Q8WWR8 484 aaPredicted RBP15□□□□□ -0.01
SFSWAP-207ENST00000538548 FMC1Q96HJ9 113 aa15□□□□□ -0.01
SFSWAP-207ENST00000538548 TMUB1Q9BVT8 246 aa15□□□□□ -0.01
SFSWAP-207ENST00000538548 NDUFA4L2Q9NRX3 87 aa15□□□□□ -0.01
SFSWAP-207ENST00000538548 PRR14LQ5THK1 2151 aa15□□□□□ -0.01
SFSWAP-207ENST00000538548 MGAQ8IWI9 3026 aa15□□□□□ -0.01
SFSWAP-207ENST00000538548 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.99□□□□□ -0.01
SFSWAP-207ENST00000538548 PGPA6NDG6 321 aa14.99□□□□□ -0.01
SFSWAP-207ENST00000538548 H3BRM9 83 aa14.99□□□□□ -0.01
SFSWAP-207ENST00000538548 CT45A6P0DMU7 189 aa14.99□□□□□ -0.01
SFSWAP-207ENST00000538548 CT45A5P0DMU8 189 aa14.99□□□□□ -0.01
SFSWAP-207ENST00000538548 CT45A7P0DMV0 189 aa14.99□□□□□ -0.01
SFSWAP-207ENST00000538548 LINC00305Q7Z4B0 112 aa14.99□□□□□ -0.01
SFSWAP-207ENST00000538548 FNDC4Q9H6D8 234 aaPredicted RBP14.99□□□□□ -0.01
SFSWAP-207ENST00000538548 MAP1BP46821 2468 aaKnown RBP14.99□□□□□ -0.01
SFSWAP-207ENST00000538548 TRGV5A0A0B4J1U4 118 aa14.99□□□□□ -0.01
SFSWAP-207ENST00000538548 CECR9P0C854 216 aa14.99□□□□□ -0.01
SFSWAP-207ENST00000538548 FOXE3Q13461 319 aa14.99□□□□□ -0.01
SFSWAP-207ENST00000538548 DAZAP1Q96EP5 407 aaKnown RBP14.99□□□□□ -0.01
SFSWAP-207ENST00000538548 DSCAML1Q8TD84 2053 aa14.99□□□□□ -0.01
SFSWAP-207ENST00000538548 A6NDN8 102 aa14.98□□□□□ -0.01
SFSWAP-207ENST00000538548 ITLN1Q8WWA0 313 aa14.98□□□□□ -0.01
SFSWAP-207ENST00000538548 DPF1Q92782 380 aa14.98□□□□□ -0.01
SFSWAP-207ENST00000538548 RPH3ALQ9UNE2 315 aa14.98□□□□□ -0.01
SFSWAP-207ENST00000538548 CEP250Q9BV73 2442 aa14.98□□□□□ -0.01
SFSWAP-207ENST00000538548 INS-IGF2F8WCM5 200 aa14.98□□□□□ -0.01
SFSWAP-207ENST00000538548 TMEM11P17152 192 aa14.98□□□□□ -0.01
SFSWAP-207ENST00000538548 BLNKQ8WV28 456 aa14.98□□□□□ -0.01
SFSWAP-207ENST00000538548 NPIPB3Q92617 1050 aa14.98□□□□□ -0.01
SFSWAP-207ENST00000538548 ZNF747Q9BV97 191 aa14.98□□□□□ -0.01
SFSWAP-207ENST00000538548 IGKV1D-37A0A075B6S9 117 aa14.97□□□□□ -0.01
SFSWAP-207ENST00000538548 K7EP34 96 aa14.97□□□□□ -0.01
SFSWAP-207ENST00000538548 HAX1O00165 279 aa14.97□□□□□ -0.01
SFSWAP-207ENST00000538548 SNAI2O43623 268 aa14.97□□□□□ -0.01
SFSWAP-207ENST00000538548 PLAUP00749 431 aa14.97□□□□□ -0.01
SFSWAP-207ENST00000538548 RBMXL3Q8N7X1 1067 aaKnown RBP14.97□□□□□ -0.01
SFSWAP-207ENST00000538548 AP5S1Q9NUS5 200 aa14.97□□□□□ -0.01
SFSWAP-207ENST00000538548 FAM87AP0C7U9 286 aa14.97□□□□□ -0.01
SFSWAP-207ENST00000538548 FGF6P10767 208 aa14.97□□□□□ -0.01
SFSWAP-207ENST00000538548 THAP8Q8NA92 274 aa14.97□□□□□ -0.01
SFSWAP-207ENST00000538548 C5orf17Q8NAS9 161 aa14.97□□□□□ -0.01
SFSWAP-207ENST00000538548 MDS2Q8NDY4 140 aa14.97□□□□□ -0.01
SFSWAP-207ENST00000538548 NPIPB6E9PJ23 425 aa14.96□□□□□ -0.01
SFSWAP-207ENST00000538548 JMJD8Q96S16 334 aa14.96□□□□□ -0.01
SFSWAP-207ENST00000538548 APOHP02749 345 aaPredicted RBP14.96□□□□□ -0.01
SFSWAP-207ENST00000538548 CSN3P07498 182 aa14.96□□□□□ -0.01
SFSWAP-207ENST00000538548 PERPQ96FX8 193 aa14.96□□□□□ -0.01
SFSWAP-207ENST00000538548 TIMM8BQ9Y5J9 83 aaPredicted RBP14.96□□□□□ -0.01
SFSWAP-207ENST00000538548 MED13Q9UHV7 2174 aa14.96□□□□□ -0.02
SFSWAP-207ENST00000538548 CD46P15529 392 aa14.96□□□□□ -0.02
SFSWAP-207ENST00000538548 UQCRFS1P47985 274 aa14.96□□□□□ -0.02
SFSWAP-207ENST00000538548 OSR1Q8TAX0 266 aaPredicted RBP14.96□□□□□ -0.02
SFSWAP-207ENST00000538548 SPOCK3Q9BQ16 436 aa14.96□□□□□ -0.02
SFSWAP-207ENST00000538548 CSN1S1P47710 185 aa14.95□□□□□ -0.02
SFSWAP-207ENST00000538548 SLC25A48Q6ZT89 311 aaKnown RBP14.95□□□□□ -0.02
SFSWAP-207ENST00000538548 AKAP13Q12802 2813 aa14.95□□□□□ -0.02
SFSWAP-207ENST00000538548 H3BUT2 72 aa14.95□□□□□ -0.02
SFSWAP-207ENST00000538548 CDX4O14627 284 aaPredicted RBP14.95□□□□□ -0.02
SFSWAP-207ENST00000538548 TCRAP04437 139 aa14.95□□□□□ -0.02
SFSWAP-207ENST00000538548 NEGR1Q7Z3B1 354 aa14.95□□□□□ -0.02
SFSWAP-207ENST00000538548 TEX45Q8NA69 505 aa14.95□□□□□ -0.02
SFSWAP-207ENST00000538548 RABAC1Q9UI14 185 aa14.95□□□□□ -0.02
SFSWAP-207ENST00000538548 TANC2Q9HCD6 1990 aa14.94□□□□□ -0.02
SFSWAP-207ENST00000538548 C1orf162Q8NEQ5 155 aaPredicted RBP14.94□□□□□ -0.02
SFSWAP-207ENST00000538548 OR10AG1Q8NH19 301 aa14.94□□□□□ -0.02
SFSWAP-207ENST00000538548 SPRY4Q9C004 299 aa14.94□□□□□ -0.02
SFSWAP-207ENST00000538548 ZNF318Q5VUA4 2279 aa14.94□□□□□ -0.02
SFSWAP-207ENST00000538548 DSCAMO60469 2012 aa14.94□□□□□ -0.02
SFSWAP-207ENST00000538548 NCR2O95944 276 aa14.94□□□□□ -0.02
SFSWAP-207ENST00000538548 COL8A1P27658 744 aa14.94□□□□□ -0.02
SFSWAP-207ENST00000538548 MOGAT3Q86VF5 341 aa14.94□□□□□ -0.02
SFSWAP-207ENST00000538548 OR1N2Q8NGR9 330 aa14.94□□□□□ -0.02
SFSWAP-207ENST00000538548 OR2K2Q8NGT1 345 aa14.94□□□□□ -0.02
SFSWAP-207ENST00000538548 HARBI1Q96MB7 349 aa14.94□□□□□ -0.02
SFSWAP-207ENST00000538548 DYSFO75923 2080 aa14.93□□□□□ -0.02
SFSWAP-207ENST00000538548 LHBP01229 141 aa14.93□□□□□ -0.02
SFSWAP-207ENST00000538548 GUSBP1Q15486 140 aa14.93□□□□□ -0.02
SFSWAP-207ENST00000538548 DMXL2Q8TDJ6 3036 aa14.93□□□□□ -0.02
SFSWAP-207ENST00000538548 DSPP15924 2871 aaKnown RBP14.93□□□□□ -0.02
SFSWAP-207ENST00000538548 A0A0G2JLM5 398 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms