RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 FXYD2P54710 66 aa0.79□□□□□ -2.28
CD44-215ENST00000525241 HBA1P69905 142 aa0.79□□□□□ -2.28
CD44-215ENST00000525241 MRPS15P82914 257 aaKnown RBP0.79□□□□□ -2.28
CD44-215ENST00000525241 STX5Q13190 355 aa0.79□□□□□ -2.28
CD44-215ENST00000525241 CDK10Q15131 360 aa0.79□□□□□ -2.28
CD44-215ENST00000525241 NDUFA5Q16718 116 aa0.79□□□□□ -2.28
CD44-215ENST00000525241 KRTAP20-1Q3LI63 56 aa0.79□□□□□ -2.28
CD44-215ENST00000525241 RPL22L1Q6P5R6 122 aaKnown RBP0.79□□□□□ -2.28
CD44-215ENST00000525241 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.79□□□□□ -2.28
CD44-215ENST00000525241 OR52R1Q8NGF1 315 aa0.79□□□□□ -2.28
CD44-215ENST00000525241 CHMP6Q96FZ7 201 aa0.79□□□□□ -2.28
CD44-215ENST00000525241 DCUN1D1Q96GG9 259 aa0.79□□□□□ -2.28
CD44-215ENST00000525241 TMEM133Q9H2Q1 129 aa0.79□□□□□ -2.28
CD44-215ENST00000525241 C14orf105Q9NVL8 296 aa0.79□□□□□ -2.28
CD44-215ENST00000525241 FBXO5Q9UKT4 447 aa0.79□□□□□ -2.28
CD44-215ENST00000525241 NUP98P52948 1817 aa0.79□□□□□ -2.28
CD44-215ENST00000525241 KMT2DO14686 5537 aa0.79□□□□□ -2.28
CD44-215ENST00000525241 TTC21AQ8NDW8 1320 aa0.79□□□□□ -2.28
CD44-215ENST00000525241 ASPMQ8IZT6 3477 aa0.79□□□□□ -2.28
CD44-215ENST00000525241 MTORP42345 2549 aa0.79□□□□□ -2.28
CD44-215ENST00000525241 USP34Q70CQ2 3546 aa0.78□□□□□ -2.28
CD44-215ENST00000525241 C5orf42Q9H799 3197 aa0.78□□□□□ -2.28
CD44-215ENST00000525241 HERC2O95714 4834 aa0.78□□□□□ -2.28
CD44-215ENST00000525241 BRCA2P51587 3418 aa0.78□□□□□ -2.28
CD44-215ENST00000525241 CELSR2Q9HCU4 2923 aa0.78□□□□□ -2.28
CD44-215ENST00000525241 IGKV1-9A0A0C4DH69 117 aa0.78□□□□□ -2.28
CD44-215ENST00000525241 C19orf84I3L1E1 186 aa0.78□□□□□ -2.28
CD44-215ENST00000525241 C1QBP02746 253 aa0.78□□□□□ -2.28
CD44-215ENST00000525241 CTSDP07339 412 aaPredicted RBP0.78□□□□□ -2.28
CD44-215ENST00000525241 UBBP0CG47 229 aa0.78□□□□□ -2.28
CD44-215ENST00000525241 DEFA1P59665 94 aa0.78□□□□□ -2.28
CD44-215ENST00000525241 ZNF345Q14585 488 aa0.78□□□□□ -2.28
CD44-215ENST00000525241 DEFB115Q30KQ5 88 aa0.78□□□□□ -2.28
CD44-215ENST00000525241 SPANXN3Q5MJ09 141 aa0.78□□□□□ -2.28
CD44-215ENST00000525241 ANKRD29Q8N6D5 301 aa0.78□□□□□ -2.28
CD44-215ENST00000525241 GDPD1Q8N9F7 314 aa0.78□□□□□ -2.28
CD44-215ENST00000525241 BORCS7Q96B45 105 aa0.78□□□□□ -2.28
CD44-215ENST00000525241 ADAT3Q96EY9 351 aaPredicted RBP0.78□□□□□ -2.28
CD44-215ENST00000525241 YIPF3Q9GZM5 350 aa0.78□□□□□ -2.28
CD44-215ENST00000525241 HEATR1Q9H583 2144 aaKnown RBP0.78□□□□□ -2.28
CD44-215ENST00000525241 CYSLTR1Q9Y271 337 aa0.78□□□□□ -2.28
CD44-215ENST00000525241 CFAP54Q96N23 3096 aa0.78□□□□□ -2.28
CD44-215ENST00000525241 EIF3AQ14152 1382 aaKnown RBP0.78□□□□□ -2.28
CD44-215ENST00000525241 LAMA3Q16787 3333 aa0.78□□□□□ -2.28
CD44-215ENST00000525241 IGF2RP11717 2491 aa0.78□□□□□ -2.28
CD44-215ENST00000525241 ADGBQ8N7X0 1667 aa0.78□□□□□ -2.29
CD44-215ENST00000525241 RNF213Q63HN8 5207 aa0.78□□□□□ -2.29
CD44-215ENST00000525241 GOLGB1Q14789 3259 aaKnown RBP0.77□□□□□ -2.29
CD44-215ENST00000525241 RIF1Q5UIP0 2472 aaKnown RBP0.77□□□□□ -2.29
CD44-215ENST00000525241 PRRC2CQ9Y520 2896 aaKnown RBP0.77□□□□□ -2.29
CD44-215ENST00000525241 TMEM212A6NML5 194 aa0.77□□□□□ -2.29
CD44-215ENST00000525241 PMP2P02689 132 aa0.77□□□□□ -2.29
CD44-215ENST00000525241 RPS4Y1P22090 263 aaKnown RBP0.77□□□□□ -2.29
CD44-215ENST00000525241 NFYAP23511 347 aaPredicted RBP0.77□□□□□ -2.29
CD44-215ENST00000525241 ARF6P62330 175 aa0.77□□□□□ -2.29
CD44-215ENST00000525241 REEP5Q00765 189 aa0.77□□□□□ -2.29
CD44-215ENST00000525241 LINC01554Q52M75 96 aa0.77□□□□□ -2.29
CD44-215ENST00000525241 AKIRIN2Q53H80 203 aa0.77□□□□□ -2.29
CD44-215ENST00000525241 TEX36Q5VZQ5 186 aa0.77□□□□□ -2.29
CD44-215ENST00000525241 Q6ZQT0 140 aa0.77□□□□□ -2.29
CD44-215ENST00000525241 ZNF826PQ6ZT77 177 aa0.77□□□□□ -2.29
CD44-215ENST00000525241 OOSP2Q86WS3 158 aa0.77□□□□□ -2.29
CD44-215ENST00000525241 OR51A2Q8NGJ7 313 aa0.77□□□□□ -2.29
CD44-215ENST00000525241 OR10X1Q8NGY0 326 aa0.77□□□□□ -2.29
CD44-215ENST00000525241 CT55Q8WUE5 264 aa0.77□□□□□ -2.29
CD44-215ENST00000525241 C11orf40Q8WZ69 217 aa0.77□□□□□ -2.29
CD44-215ENST00000525241 PARVBQ9HBI1 364 aa0.77□□□□□ -2.29
CD44-215ENST00000525241 RTL1A6NKG5 1358 aa0.77□□□□□ -2.29
CD44-215ENST00000525241 TRPM1Q7Z4N2 1603 aa0.77□□□□□ -2.29
CD44-215ENST00000525241 LAMB4A4D0S4 1761 aa0.77□□□□□ -2.29
CD44-215ENST00000525241 MYLKQ15746 1914 aa0.77□□□□□ -2.29
CD44-215ENST00000525241 KIAA1549Q9HCM3 1950 aa0.77□□□□□ -2.29
CD44-215ENST00000525241 NCOA6Q14686 2063 aaPredicted RBP0.77□□□□□ -2.29
CD44-215ENST00000525241 MGAM2Q2M2H8 2515 aa0.77□□□□□ -2.29
CD44-215ENST00000525241 HTTP42858 3142 aa0.77□□□□□ -2.29
CD44-215ENST00000525241 NF1P21359 2839 aa0.76□□□□□ -2.29
CD44-215ENST00000525241 TENM3Q9P273 2699 aa0.76□□□□□ -2.29
CD44-215ENST00000525241 ALPK3Q96L96 1907 aa0.76□□□□□ -2.29
CD44-215ENST00000525241 MUC5ACP98088 5654 aa0.76□□□□□ -2.29
CD44-215ENST00000525241 TAF1LQ8IZX4 1826 aa0.76□□□□□ -2.29
CD44-215ENST00000525241 BICRAQ9NZM4 1560 aa0.76□□□□□ -2.29
CD44-215ENST00000525241 RIC1Q4ADV7 1423 aa0.76□□□□□ -2.29
CD44-215ENST00000525241 TRAV4A0A0B4J268 109 aa0.76□□□□□ -2.29
CD44-215ENST00000525241 OR7C1O76099 320 aaPredicted RBP0.76□□□□□ -2.29
CD44-215ENST00000525241 SERPINE1P05121 402 aa0.76□□□□□ -2.29
CD44-215ENST00000525241 RBP1P09455 135 aa0.76□□□□□ -2.29
CD44-215ENST00000525241 SRIP30626 198 aa0.76□□□□□ -2.29
CD44-215ENST00000525241 RNASE4P34096 147 aaKnown RBP0.76□□□□□ -2.29
CD44-215ENST00000525241 DHRS4L2Q6PKH6 230 aa0.76□□□□□ -2.29
CD44-215ENST00000525241 MIR17HGQ75NE6 70 aa0.76□□□□□ -2.29
CD44-215ENST00000525241 S100A7AQ86SG5 101 aa0.76□□□□□ -2.29
CD44-215ENST00000525241 TRIM4Q9C037 500 aa0.76□□□□□ -2.29
CD44-215ENST00000525241 COMMD5Q9GZQ3 224 aa0.76□□□□□ -2.29
CD44-215ENST00000525241 FAM96AQ9H5X1 160 aa0.76□□□□□ -2.29
CD44-215ENST00000525241 PSTPIP2Q9H939 334 aa0.76□□□□□ -2.29
CD44-215ENST00000525241 UQCC1Q9NVA1 299 aa0.76□□□□□ -2.29
CD44-215ENST00000525241 UNC13CQ8NB66 2214 aa0.76□□□□□ -2.29
CD44-215ENST00000525241 MDN1Q9NU22 5596 aa0.75□□□□□ -2.29
CD44-215ENST00000525241 N4BP2Q86UW6 1770 aaPredicted RBP0.75□□□□□ -2.29
CD44-215ENST00000525241 DMBT1Q9UGM3 2413 aaPredicted RBP0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms