RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 OR9G1Q8NH87 305 aa10.5□□□□□ -0.73
VEGFA-215ENST00000497139 PRSS3P2Q8NHM4 247 aa10.5□□□□□ -0.73
VEGFA-215ENST00000497139 ZNF502Q8TBZ5 544 aa10.5□□□□□ -0.73
VEGFA-215ENST00000497139 ZNF137PP52743 207 aa10.5□□□□□ -0.73
VEGFA-215ENST00000497139 RPL39P5Q59GN2 51 aa10.5□□□□□ -0.73
VEGFA-215ENST00000497139 MORN5Q5VZ52 161 aa10.5□□□□□ -0.73
VEGFA-215ENST00000497139 LCNL1Q6ZST4 164 aa10.5□□□□□ -0.73
VEGFA-215ENST00000497139 PIP4P2Q8N4L2 257 aa10.5□□□□□ -0.73
VEGFA-215ENST00000497139 GEMIN7Q9H840 131 aaKnown RBP10.5□□□□□ -0.73
VEGFA-215ENST00000497139 A0A1W2PRD5 423 aa10.49□□□□□ -0.73
VEGFA-215ENST00000497139 A0A1W2PRF3 423 aa10.49□□□□□ -0.73
VEGFA-215ENST00000497139 A0A1W2PRM7 423 aa10.49□□□□□ -0.73
VEGFA-215ENST00000497139 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.49□□□□□ -0.73
VEGFA-215ENST00000497139 MOSP00540 346 aa10.49□□□□□ -0.73
VEGFA-215ENST00000497139 PYYP10082 97 aa10.49□□□□□ -0.73
VEGFA-215ENST00000497139 IGFBP4P22692 258 aa10.49□□□□□ -0.73
VEGFA-215ENST00000497139 FAM234AQ9H0X4 552 aa10.49□□□□□ -0.73
VEGFA-215ENST00000497139 RAB9BQ9NP90 201 aa10.49□□□□□ -0.73
VEGFA-215ENST00000497139 TRIOO75962 3097 aa10.49□□□□□ -0.73
VEGFA-215ENST00000497139 A0A1B0GUT8 65 aa10.49□□□□□ -0.73
VEGFA-215ENST00000497139 SLC25A45Q8N413 288 aa10.49□□□□□ -0.73
VEGFA-215ENST00000497139 PHLDA1Q8WV24 401 aaPredicted RBP10.49□□□□□ -0.73
VEGFA-215ENST00000497139 ITLN1Q8WWA0 313 aa10.49□□□□□ -0.73
VEGFA-215ENST00000497139 KLF13Q9Y2Y9 288 aaPredicted RBP10.49□□□□□ -0.73
VEGFA-215ENST00000497139 ASXL3Q9C0F0 2248 aa10.49□□□□□ -0.73
VEGFA-215ENST00000497139 OR11H12B2RN74 326 aa10.49□□□□□ -0.73
VEGFA-215ENST00000497139 E9PLD3 99 aa10.49□□□□□ -0.73
VEGFA-215ENST00000497139 CSN3P07498 182 aa10.49□□□□□ -0.73
VEGFA-215ENST00000497139 RNASE2P10153 161 aaKnown RBP10.49□□□□□ -0.73
VEGFA-215ENST00000497139 SRSF1Q07955 248 aaKnown RBP eCLIP10.49□□□□□ -0.732e-7■□□□□ 10.8
VEGFA-215ENST00000497139 SRSF6Q13247 344 aaKnown RBP10.49□□□□□ -0.73
VEGFA-215ENST00000497139 LINC00322Q6ZN03 302 aaPredicted RBP10.49□□□□□ -0.73
VEGFA-215ENST00000497139 OR11H1Q8NG94 326 aa10.49□□□□□ -0.73
VEGFA-215ENST00000497139 OR11H2Q8NH07 326 aa10.49□□□□□ -0.73
VEGFA-215ENST00000497139 SELENOKQ9Y6D0 94 aa10.49□□□□□ -0.73
VEGFA-215ENST00000497139 VSTM5A8MXK1 200 aa10.48□□□□□ -0.73
VEGFA-215ENST00000497139 UPK2O00526 184 aa10.48□□□□□ -0.73
VEGFA-215ENST00000497139 FSTL3O95633 263 aa10.48□□□□□ -0.73
VEGFA-215ENST00000497139 SRYQ05066 204 aa10.48□□□□□ -0.73
VEGFA-215ENST00000497139 LTC4SQ16873 150 aa10.48□□□□□ -0.73
VEGFA-215ENST00000497139 Q6AWC8 147 aa10.48□□□□□ -0.73
VEGFA-215ENST00000497139 LINC00696Q6ZRV3 163 aa10.48□□□□□ -0.73
VEGFA-215ENST00000497139 MOB3BQ86TA1 216 aa10.48□□□□□ -0.73
VEGFA-215ENST00000497139 C11orf53Q8IXP5 236 aa10.48□□□□□ -0.73
VEGFA-215ENST00000497139 TTC9CQ8N5M4 171 aa10.48□□□□□ -0.73
VEGFA-215ENST00000497139 SPAG8Q99932 426 aaPredicted RBP10.48□□□□□ -0.73
VEGFA-215ENST00000497139 HINT2Q9BX68 163 aa10.48□□□□□ -0.73
VEGFA-215ENST00000497139 CXXC4Q9H2H0 198 aa10.48□□□□□ -0.73
VEGFA-215ENST00000497139 GON4LQ3T8J9 2241 aa10.48□□□□□ -0.73
VEGFA-215ENST00000497139 PRR33A8MZF0 331 aa10.48□□□□□ -0.73
VEGFA-215ENST00000497139 INS-IGF2F8WCM5 200 aa10.48□□□□□ -0.73
VEGFA-215ENST00000497139 WNT9BO14905 357 aa10.48□□□□□ -0.73
VEGFA-215ENST00000497139 TSPAN13O95857 204 aa10.48□□□□□ -0.73
VEGFA-215ENST00000497139 HLA-DRB4P13762 266 aa10.48□□□□□ -0.73
VEGFA-215ENST00000497139 LOXL3P58215 753 aa10.48□□□□□ -0.73
VEGFA-215ENST00000497139 GNG5P63218 68 aa10.48□□□□□ -0.73
VEGFA-215ENST00000497139 OR8A1Q8NGG7 326 aa10.48□□□□□ -0.73
VEGFA-215ENST00000497139 ZNF418Q8TF45 676 aaPredicted RBP10.48□□□□□ -0.73
VEGFA-215ENST00000497139 ZNF414Q96IQ9 312 aa10.48□□□□□ -0.73
VEGFA-215ENST00000497139 TM2D2Q9BX73 214 aa10.48□□□□□ -0.73
VEGFA-215ENST00000497139 HLA-DRB4X5D2U9 266 aa10.48□□□□□ -0.73
VEGFA-215ENST00000497139 A0A096LNJ9 63 aa10.47□□□□□ -0.73
VEGFA-215ENST00000497139 IGHV5-10-1A0A0J9YXX1 117 aa10.47□□□□□ -0.73
VEGFA-215ENST00000497139 TRBV6-1A0A0K0K1D8 114 aa10.47□□□□□ -0.73
VEGFA-215ENST00000497139 Q6ZS92 163 aa10.47□□□□□ -0.73
VEGFA-215ENST00000497139 MDP1Q86V88 176 aa10.47□□□□□ -0.73
VEGFA-215ENST00000497139 TCRBV4S1A1TA0A5B7 111 aa10.47□□□□□ -0.73
VEGFA-215ENST00000497139 PPP1R35Q8TAP8 253 aa10.47□□□□□ -0.73
VEGFA-215ENST00000497139 PGPA6NDG6 321 aa10.46□□□□□ -0.73
VEGFA-215ENST00000497139 COL8A1P27658 744 aa10.46□□□□□ -0.73
VEGFA-215ENST00000497139 CACNG7P62955 275 aa10.46□□□□□ -0.73
VEGFA-215ENST00000497139 BCL6BQ8N143 479 aaPredicted RBP10.46□□□□□ -0.73
VEGFA-215ENST00000497139 TIMM8BQ9Y5J9 83 aaPredicted RBP10.46□□□□□ -0.73
VEGFA-215ENST00000497139 CABIN1Q9Y6J0 2220 aa10.46□□□□□ -0.74
VEGFA-215ENST00000497139 KBTBD11-OT1A0A1B0GTJ5 212 aa10.46□□□□□ -0.74
VEGFA-215ENST00000497139 HBDP02042 147 aa10.46□□□□□ -0.74
VEGFA-215ENST00000497139 PATE2Q6UY27 113 aa10.46□□□□□ -0.74
VEGFA-215ENST00000497139 ZNF493Q6ZR52 646 aa10.46□□□□□ -0.74
VEGFA-215ENST00000497139 THAP8Q8NA92 274 aa10.46□□□□□ -0.74
VEGFA-215ENST00000497139 ATP6V0E2Q8NHE4 81 aa10.46□□□□□ -0.74
VEGFA-215ENST00000497139 AKIRIN1Q9H9L7 192 aaPredicted RBP10.46□□□□□ -0.74
VEGFA-215ENST00000497139 hADV38S2A0JD32 116 aa10.45□□□□□ -0.74
VEGFA-215ENST00000497139 OVOL3O00110 214 aa10.45□□□□□ -0.74
VEGFA-215ENST00000497139 GCSHP23434 173 aa10.45□□□□□ -0.74
VEGFA-215ENST00000497139 WFDC2Q14508 124 aa10.45□□□□□ -0.74
VEGFA-215ENST00000497139 IL11RAQ14626 422 aa10.45□□□□□ -0.74
VEGFA-215ENST00000497139 TAL2Q16559 108 aa10.45□□□□□ -0.74
VEGFA-215ENST00000497139 OBP2BQ9NPH6 170 aa10.45□□□□□ -0.74
VEGFA-215ENST00000497139 CYSLTR1Q9Y271 337 aa10.45□□□□□ -0.74
VEGFA-215ENST00000497139 U3KQK5 164 aa10.45□□□□□ -0.74
VEGFA-215ENST00000497139 SPAARA0A1B0GVQ0 90 aa10.45□□□□□ -0.74
VEGFA-215ENST00000497139 TCRAP04437 139 aa10.45□□□□□ -0.74
VEGFA-215ENST00000497139 NMUP48645 174 aa10.45□□□□□ -0.74
VEGFA-215ENST00000497139 ZNF134P52741 427 aa10.45□□□□□ -0.74
VEGFA-215ENST00000497139 FXYD2P54710 66 aa10.45□□□□□ -0.74
VEGFA-215ENST00000497139 LINC01559Q495D7 138 aa10.45□□□□□ -0.74
VEGFA-215ENST00000497139 PCP2Q8IVA1 136 aa10.45□□□□□ -0.74
VEGFA-215ENST00000497139 TMEM116Q8NCL8 245 aa10.45□□□□□ -0.74
VEGFA-215ENST00000497139 C8orf46Q8TAG6 207 aa10.45□□□□□ -0.74
VEGFA-215ENST00000497139 NKX2-8O15522 239 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms