RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 CASP8AP2Q9UKL3 1982 aa0.64□□□□□ -2.31
CLK1-209ENST00000472679 MED12Q93074 2177 aa0.64□□□□□ -2.31
CLK1-209ENST00000472679 ZNF462Q96JM2 2506 aa0.64□□□□□ -2.31
CLK1-209ENST00000472679 PIK3C2GO75747 1445 aa0.64□□□□□ -2.31
CLK1-209ENST00000472679 ZFC3H1O60293 1989 aaKnown RBP0.63□□□□□ -2.31
CLK1-209ENST00000472679 GADD45GO95257 159 aa0.63□□□□□ -2.31
CLK1-209ENST00000472679 PPIBP23284 216 aaKnown RBP0.63□□□□□ -2.31
CLK1-209ENST00000472679 EFNA4P52798 201 aa0.63□□□□□ -2.31
CLK1-209ENST00000472679 RHOBP62745 196 aa0.63□□□□□ -2.31
CLK1-209ENST00000472679 ITGB3BPQ13352 177 aaPredicted RBP0.63□□□□□ -2.31
CLK1-209ENST00000472679 KRTAP21-1Q3LI58 79 aa0.63□□□□□ -2.31
CLK1-209ENST00000472679 OR2T10Q8NGZ9 312 aa0.63□□□□□ -2.31
CLK1-209ENST00000472679 SLAMF6Q96DU3 332 aa0.63□□□□□ -2.31
CLK1-209ENST00000472679 UCK1Q9HA47 277 aa0.63□□□□□ -2.31
CLK1-209ENST00000472679 C14orf132Q9NPU4 83 aa0.63□□□□□ -2.31
CLK1-209ENST00000472679 IDI2-AS1Q9NZ38 188 aa0.63□□□□□ -2.31
CLK1-209ENST00000472679 CHCHD2Q9Y6H1 151 aaPredicted RBP0.63□□□□□ -2.31
CLK1-209ENST00000472679 RPP14O95059 124 aaKnown RBP0.62□□□□□ -2.31
CLK1-209ENST00000472679 TCRBP04435 133 aa0.62□□□□□ -2.31
CLK1-209ENST00000472679 SERPINE1P05121 402 aa0.62□□□□□ -2.31
CLK1-209ENST00000472679 DYNLT1P63172 113 aa0.62□□□□□ -2.31
CLK1-209ENST00000472679 PSG9Q00887 426 aa0.62□□□□□ -2.31
CLK1-209ENST00000472679 Q6Q795 121 aa0.62□□□□□ -2.31
CLK1-209ENST00000472679 TMEM133Q9H2Q1 129 aa0.62□□□□□ -2.31
CLK1-209ENST00000472679 FBXO5Q9UKT4 447 aa0.62□□□□□ -2.31
CLK1-209ENST00000472679 RIMBP3CA6NJZ7 1639 aa0.62□□□□□ -2.31
CLK1-209ENST00000472679 RIMBP3BA6NNM3 1639 aa0.62□□□□□ -2.31
CLK1-209ENST00000472679 RIMBP3Q9UFD9 1639 aa0.62□□□□□ -2.31
CLK1-209ENST00000472679 ZFYVE9O95405 1425 aa0.62□□□□□ -2.31
CLK1-209ENST00000472679 ARHGEF28Q8N1W1 1705 aaKnown RBP0.61□□□□□ -2.31
CLK1-209ENST00000472679 TRBV6-4A0A1B0GX49 114 aa0.61□□□□□ -2.31
CLK1-209ENST00000472679 CCL16O15467 120 aa0.61□□□□□ -2.31
CLK1-209ENST00000472679 CYB5BO43169 146 aa0.61□□□□□ -2.31
CLK1-209ENST00000472679 C8GP07360 202 aa0.61□□□□□ -2.31
CLK1-209ENST00000472679 RNASE4P34096 147 aaKnown RBP0.61□□□□□ -2.31
CLK1-209ENST00000472679 EDDM3AQ14507 147 aa0.61□□□□□ -2.31
CLK1-209ENST00000472679 FAM74A1Q5RGS3 127 aa0.61□□□□□ -2.31
CLK1-209ENST00000472679 PRADC1Q9BSG0 188 aa0.61□□□□□ -2.31
CLK1-209ENST00000472679 MUC5BQ9HC84 5762 aaPredicted RBP0.61□□□□□ -2.31
CLK1-209ENST00000472679 KIAA1549Q9HCM3 1950 aa0.6□□□□□ -2.31
CLK1-209ENST00000472679 PDE6DO43924 150 aa0.6□□□□□ -2.31
CLK1-209ENST00000472679 ANP32AP39687 249 aaKnown RBP0.6□□□□□ -2.31
CLK1-209ENST00000472679 SLC30A7Q8NEW0 376 aa0.6□□□□□ -2.31
CLK1-209ENST00000472679 TRIM4Q9C037 500 aa0.6□□□□□ -2.31
CLK1-209ENST00000472679 TAS2R7Q9NYW3 318 aa0.6□□□□□ -2.31
CLK1-209ENST00000472679 TVP23BQ9NYZ1 205 aa0.6□□□□□ -2.31
CLK1-209ENST00000472679 USP24Q9UPU5 2620 aa0.6□□□□□ -2.31
CLK1-209ENST00000472679 CCDC144AA2RUR9 1427 aa0.59□□□□□ -2.31
CLK1-209ENST00000472679 KLF7O75840 302 aaPredicted RBP0.59□□□□□ -2.31
CLK1-209ENST00000472679 CEBPGP53567 150 aa0.59□□□□□ -2.31
CLK1-209ENST00000472679 SRSF6Q13247 344 aaKnown RBP0.59□□□□□ -2.31
CLK1-209ENST00000472679 LINC00322Q6ZN03 302 aaPredicted RBP0.59□□□□□ -2.31
CLK1-209ENST00000472679 OTUD6BQ8N6M0 293 aa0.59□□□□□ -2.31
CLK1-209ENST00000472679 OR52L1Q8NGH7 329 aa0.59□□□□□ -2.31
CLK1-209ENST00000472679 OR51A2Q8NGJ7 313 aa0.59□□□□□ -2.31
CLK1-209ENST00000472679 FAM172AQ8WUF8 416 aa0.59□□□□□ -2.31
CLK1-209ENST00000472679 RNF122Q9H9V4 155 aa0.59□□□□□ -2.31
CLK1-209ENST00000472679 PARVGQ9HBI0 331 aa0.59□□□□□ -2.31
CLK1-209ENST00000472679 COL6A3P12111 3177 aa0.58□□□□□ -2.32
CLK1-209ENST00000472679 A0A1W2PPM0 123 aa0.58□□□□□ -2.32
CLK1-209ENST00000472679 PHGR1C9JFL3 82 aa0.58□□□□□ -2.32
CLK1-209ENST00000472679 DHFRP00374 187 aa0.58□□□□□ -2.32
CLK1-209ENST00000472679 AP3S2P59780 193 aa0.58□□□□□ -2.32
CLK1-209ENST00000472679 GKN2Q86XP6 184 aa0.58□□□□□ -2.32
CLK1-209ENST00000472679 STAG3L4Q8TBR4 150 aa0.58□□□□□ -2.32
CLK1-209ENST00000472679 ITFG2Q969R8 447 aa0.58□□□□□ -2.32
CLK1-209ENST00000472679 TLNRD1Q9H1K6 362 aa0.58□□□□□ -2.32
CLK1-209ENST00000472679 PLB1Q6P1J6 1458 aa0.58□□□□□ -2.32
CLK1-209ENST00000472679 UBR4Q5T4S7 5183 aa0.57□□□□□ -2.32
CLK1-209ENST00000472679 TCRBV4S1A1TA0A5B7 111 aa0.57□□□□□ -2.32
CLK1-209ENST00000472679 HIST1H3AP68431 136 aa0.57□□□□□ -2.32
CLK1-209ENST00000472679 H3F3AP84243 136 aa0.57□□□□□ -2.32
CLK1-209ENST00000472679 ST6GALNAC3Q8NDV1 305 aa0.57□□□□□ -2.32
CLK1-209ENST00000472679 OR2T35Q8NGX2 323 aa0.57□□□□□ -2.32
CLK1-209ENST00000472679 TMEM254Q8TBM7 123 aa0.57□□□□□ -2.32
CLK1-209ENST00000472679 HEATR1Q9H583 2144 aaKnown RBP0.57□□□□□ -2.32
CLK1-209ENST00000472679 GLTPQ9NZD2 209 aa0.57□□□□□ -2.32
CLK1-209ENST00000472679 TMEM14CQ9P0S9 112 aa0.57□□□□□ -2.32
CLK1-209ENST00000472679 ASCC3Q8N3C0 2202 aaKnown RBP0.57□□□□□ -2.32
CLK1-209ENST00000472679 RTL1A6NKG5 1358 aa0.57□□□□□ -2.32
CLK1-209ENST00000472679 MYH10P35580 1976 aa0.56□□□□□ -2.32
CLK1-209ENST00000472679 SCN8AQ9UQD0 1980 aa0.56□□□□□ -2.32
CLK1-209ENST00000472679 J3QRK9 145 aa0.56□□□□□ -2.32
CLK1-209ENST00000472679 TIMM17BO60830 172 aa0.56□□□□□ -2.32
CLK1-209ENST00000472679 HAND1O96004 215 aa0.56□□□□□ -2.32
CLK1-209ENST00000472679 EIF5AP63241 154 aaKnown RBP0.56□□□□□ -2.32
CLK1-209ENST00000472679 TMEM97Q5BJF2 176 aa0.56□□□□□ -2.32
CLK1-209ENST00000472679 SPATA8Q6RVD6 105 aa0.56□□□□□ -2.32
CLK1-209ENST00000472679 MYH7BA7E2Y1 1941 aa0.56□□□□□ -2.32
CLK1-209ENST00000472679 APCP25054 2843 aa0.56□□□□□ -2.32
CLK1-209ENST00000472679 OBSL1O75147 1896 aa0.55□□□□□ -2.32
CLK1-209ENST00000472679 PCLOQ9Y6V0 5065 aa0.55□□□□□ -2.32
CLK1-209ENST00000472679 SERPINB9P50453 376 aa0.55□□□□□ -2.32
CLK1-209ENST00000472679 NCOA1Q15788 1441 aa0.55□□□□□ -2.32
CLK1-209ENST00000472679 TRANK1O15050 2925 aa0.54□□□□□ -2.32
CLK1-209ENST00000472679 ALPK3Q96L96 1907 aa0.54□□□□□ -2.32
CLK1-209ENST00000472679 MACF1Q9UPN3 7388 aaKnown RBP0.54□□□□□ -2.32
CLK1-209ENST00000472679 IGHV1-58A0A0C4DH39 117 aa0.54□□□□□ -2.32
CLK1-209ENST00000472679 TLCD2A6NGC4 264 aa0.54□□□□□ -2.32
CLK1-209ENST00000472679 SRP14P37108 136 aaKnown RBP0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms