RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 SMCO3A2RU48 225 aa6.28□□□□□ -1.4
NPHP3-204ENST00000469232 C17orf112F2Z3M2 114 aa6.28□□□□□ -1.4
NPHP3-204ENST00000469232 BMPR1BO00238 502 aa6.28□□□□□ -1.4
NPHP3-204ENST00000469232 GNG7O60262 68 aa6.28□□□□□ -1.4
NPHP3-204ENST00000469232 TSPAN15O95858 294 aa6.28□□□□□ -1.4
NPHP3-204ENST00000469232 IFNA7P01567 189 aa6.28□□□□□ -1.4
NPHP3-204ENST00000469232 MBP02144 154 aa6.28□□□□□ -1.4
NPHP3-204ENST00000469232 CLEC3BP05452 202 aa6.28□□□□□ -1.4
NPHP3-204ENST00000469232 FABP1P07148 127 aa6.28□□□□□ -1.4
NPHP3-204ENST00000469232 LGALS1P09382 135 aaKnown RBP6.28□□□□□ -1.4
NPHP3-204ENST00000469232 ZNF90Q03938 601 aa6.28□□□□□ -1.4
NPHP3-204ENST00000469232 FOXL1Q12952 345 aa6.28□□□□□ -1.4
NPHP3-204ENST00000469232 TIGITQ495A1 244 aa6.28□□□□□ -1.4
NPHP3-204ENST00000469232 MIC13Q5XKP0 118 aa6.28□□□□□ -1.4
NPHP3-204ENST00000469232 CDPF1Q6NVV7 123 aa6.28□□□□□ -1.4
NPHP3-204ENST00000469232 DPPA3Q6W0C5 159 aa6.28□□□□□ -1.4
NPHP3-204ENST00000469232 ZNF600Q6ZNG1 722 aa6.28□□□□□ -1.4
NPHP3-204ENST00000469232 LCNL1Q6ZST4 164 aa6.28□□□□□ -1.4
NPHP3-204ENST00000469232 PRIMA1Q86XR5 153 aa6.28□□□□□ -1.4
NPHP3-204ENST00000469232 STPG3Q8N7X2 389 aa6.28□□□□□ -1.4
NPHP3-204ENST00000469232 LYPD6BQ8NI32 183 aa6.28□□□□□ -1.4
NPHP3-204ENST00000469232 GNB4Q9HAV0 340 aa6.28□□□□□ -1.4
NPHP3-204ENST00000469232 RPRMQ9NS64 109 aa6.28□□□□□ -1.4
NPHP3-204ENST00000469232 ZNF355PQ9NSJ1 428 aa6.28□□□□□ -1.4
NPHP3-204ENST00000469232 SLC39A9Q9NUM3 307 aa6.28□□□□□ -1.4
NPHP3-204ENST00000469232 MRPL27Q9P0M9 148 aaKnown RBP6.28□□□□□ -1.4
NPHP3-204ENST00000469232 ATRQ13535 2644 aa6.27□□□□□ -1.41
NPHP3-204ENST00000469232 SETD2Q9BYW2 2564 aaPredicted RBP6.27□□□□□ -1.41
NPHP3-204ENST00000469232 TRAV1-1A0A0B4J248 108 aa6.27□□□□□ -1.41
NPHP3-204ENST00000469232 ZFP92A6NM28 416 aa6.27□□□□□ -1.41
NPHP3-204ENST00000469232 OR5G3P0C626 314 aa6.27□□□□□ -1.41
NPHP3-204ENST00000469232 PSG1P11464 419 aa6.27□□□□□ -1.41
NPHP3-204ENST00000469232 M6PRP20645 277 aa6.27□□□□□ -1.41
NPHP3-204ENST00000469232 KRTAP10-3P60369 221 aa6.27□□□□□ -1.41
NPHP3-204ENST00000469232 DEFA5Q01523 94 aa6.27□□□□□ -1.41
NPHP3-204ENST00000469232 PATE2Q6UY27 113 aa6.27□□□□□ -1.41
NPHP3-204ENST00000469232 GPHB5Q86YW7 130 aa6.27□□□□□ -1.41
NPHP3-204ENST00000469232 RPP25LQ8N5L8 163 aaKnown RBP6.27□□□□□ -1.41
NPHP3-204ENST00000469232 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.27□□□□□ -1.41
NPHP3-204ENST00000469232 ZNF709Q8N972 641 aa6.27□□□□□ -1.41
NPHP3-204ENST00000469232 OR4X2Q8NGF9 303 aa6.27□□□□□ -1.41
NPHP3-204ENST00000469232 LRRC20Q8TCA0 184 aa6.27□□□□□ -1.41
NPHP3-204ENST00000469232 C4orf3Q8WVX3 66 aa6.27□□□□□ -1.41
NPHP3-204ENST00000469232 MBD3L1Q8WWY6 194 aa6.27□□□□□ -1.41
NPHP3-204ENST00000469232 SAT2Q96F10 170 aaPredicted RBP6.27□□□□□ -1.41
NPHP3-204ENST00000469232 TECRQ9NZ01 308 aaKnown RBP6.27□□□□□ -1.41
NPHP3-204ENST00000469232 PEF1Q9UBV8 284 aaKnown RBP6.27□□□□□ -1.41
NPHP3-204ENST00000469232 U3KQE9 123 aa6.27□□□□□ -1.41
NPHP3-204ENST00000469232 FBN1P35555 2871 aaKnown RBP6.26□□□□□ -1.41
NPHP3-204ENST00000469232 TMEM238LA0A1B0GVL6 79 aa6.26□□□□□ -1.41
NPHP3-204ENST00000469232 OR2T8A6NH00 312 aa6.26□□□□□ -1.41
NPHP3-204ENST00000469232 NDUFA4O00483 81 aa6.26□□□□□ -1.41
NPHP3-204ENST00000469232 NUPL2O15504 423 aaKnown RBP6.26□□□□□ -1.41
NPHP3-204ENST00000469232 SCGB2A1O75556 95 aa6.26□□□□□ -1.41
NPHP3-204ENST00000469232 TRBV12-3P01733 135 aa6.26□□□□□ -1.41
NPHP3-204ENST00000469232 NMBP08949 121 aa6.26□□□□□ -1.41
NPHP3-204ENST00000469232 RD3LP0DJH9 198 aa6.26□□□□□ -1.41
NPHP3-204ENST00000469232 GPR183P32249 361 aa6.26□□□□□ -1.41
NPHP3-204ENST00000469232 B2MP61769 119 aa6.26□□□□□ -1.41
NPHP3-204ENST00000469232 FHL3Q13643 280 aa6.26□□□□□ -1.41
NPHP3-204ENST00000469232 PMS2P11Q13670 270 aa6.26□□□□□ -1.41
NPHP3-204ENST00000469232 Q56UQ5 140 aa6.26□□□□□ -1.41
NPHP3-204ENST00000469232 TMEM41BQ5BJD5 291 aa6.26□□□□□ -1.41
NPHP3-204ENST00000469232 FFAR4Q5NUL3 377 aa6.26□□□□□ -1.41
NPHP3-204ENST00000469232 ALKAL2Q6UX46 152 aa6.26□□□□□ -1.41
NPHP3-204ENST00000469232 CLEC19AQ6UXS0 136 aa6.26□□□□□ -1.41
NPHP3-204ENST00000469232 BPIFCQ8NFQ6 507 aa6.26□□□□□ -1.41
NPHP3-204ENST00000469232 OR51G1Q8NGK1 321 aa6.26□□□□□ -1.41
NPHP3-204ENST00000469232 GATAD1Q8WUU5 269 aa6.26□□□□□ -1.41
NPHP3-204ENST00000469232 TMEM37Q8WXS4 190 aa6.26□□□□□ -1.41
NPHP3-204ENST00000469232 RNF2Q99496 336 aa6.26□□□□□ -1.41
NPHP3-204ENST00000469232 UBQLN2Q9UHD9 624 aa6.26□□□□□ -1.41
NPHP3-204ENST00000469232 S4R3C0 116 aa6.26□□□□□ -1.41
NPHP3-204ENST00000469232 K7EMT4 169 aa6.25□□□□□ -1.41
NPHP3-204ENST00000469232 GGCTO75223 188 aaKnown RBP6.25□□□□□ -1.41
NPHP3-204ENST00000469232 HSPB1P04792 205 aaKnown RBP6.25□□□□□ -1.41
NPHP3-204ENST00000469232 CD28P10747 220 aa6.25□□□□□ -1.41
NPHP3-204ENST00000469232 GATA2P23769 480 aaPredicted RBP6.25□□□□□ -1.41
NPHP3-204ENST00000469232 SRSF2Q01130 221 aaKnown RBP6.25□□□□□ -1.41
NPHP3-204ENST00000469232 RELQ04864 619 aaPredicted RBP6.25□□□□□ -1.41
NPHP3-204ENST00000469232 ZNF616Q08AN1 781 aa6.25□□□□□ -1.41
NPHP3-204ENST00000469232 ZNF726P1Q15940 193 aa6.25□□□□□ -1.41
NPHP3-204ENST00000469232 ACOT6Q3I5F7 207 aaPredicted RBP6.25□□□□□ -1.41
NPHP3-204ENST00000469232 KRTAP24-1Q3LI83 254 aa6.25□□□□□ -1.41
NPHP3-204ENST00000469232 CLLU1Q5K131 121 aa6.25□□□□□ -1.41
NPHP3-204ENST00000469232 TOMM20LQ6UXN7 152 aa6.25□□□□□ -1.41
NPHP3-204ENST00000469232 REC114Q7Z4M0 266 aa6.25□□□□□ -1.41
NPHP3-204ENST00000469232 Q8WTZ3 238 aa6.25□□□□□ -1.41
NPHP3-204ENST00000469232 RNF141Q8WVD5 230 aa6.25□□□□□ -1.41
NPHP3-204ENST00000469232 RCC1LQ96I51 464 aaKnown RBP6.25□□□□□ -1.41
NPHP3-204ENST00000469232 VSIRQ9H7M9 311 aa6.25□□□□□ -1.41
NPHP3-204ENST00000469232 DNAJC4Q9NNZ3 241 aa6.25□□□□□ -1.41
NPHP3-204ENST00000469232 TSSC4Q9Y5U2 329 aaPredicted RBP6.25□□□□□ -1.41
NPHP3-204ENST00000469232 TENM1Q9UKZ4 2725 aa6.25□□□□□ -1.41
NPHP3-204ENST00000469232 A8MWP6 167 aa6.25□□□□□ -1.41
NPHP3-204ENST00000469232 LGALS9O00182 355 aa6.25□□□□□ -1.41
NPHP3-204ENST00000469232 IGHV3-23P01764 117 aa6.25□□□□□ -1.41
NPHP3-204ENST00000469232 ARL3P36405 182 aa6.25□□□□□ -1.41
NPHP3-204ENST00000469232 ELLP55199 621 aaPredicted RBP6.25□□□□□ -1.41
NPHP3-204ENST00000469232 RAB2AP61019 212 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms