RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 PMS2P5A8MQ11 134 aa12.33□□□□□ -0.44
UBE3B-202ENST00000342494 RIPPLY3P57055 190 aa12.33□□□□□ -0.44
UBE3B-202ENST00000342494 LHFPL4Q7Z7J7 247 aa12.33□□□□□ -0.44
UBE3B-202ENST00000342494 C1QTNF4Q9BXJ3 329 aa12.33□□□□□ -0.44
UBE3B-202ENST00000342494 WDR83OSQ9Y284 106 aa12.33□□□□□ -0.44
UBE3B-202ENST00000342494 ID3Q02535 119 aa12.33□□□□□ -0.44
UBE3B-202ENST00000342494 KLF17Q5JT82 389 aaPredicted RBP12.33□□□□□ -0.44
UBE3B-202ENST00000342494 SSBP4Q9BWG4 385 aaPredicted RBP12.33□□□□□ -0.44
UBE3B-202ENST00000342494 PRB4P10163 310 aaPredicted RBP12.33□□□□□ -0.44
UBE3B-202ENST00000342494 TTC32Q5I0X7 151 aa12.33□□□□□ -0.44
UBE3B-202ENST00000342494 F2Z2F3 143 aa12.32□□□□□ -0.44
UBE3B-202ENST00000342494 PPBPP02775 128 aa12.32□□□□□ -0.44
UBE3B-202ENST00000342494 NDPQ00604 133 aa12.32□□□□□ -0.44
UBE3B-202ENST00000342494 FAM19A2Q8N3H0 131 aa12.32□□□□□ -0.44
UBE3B-202ENST00000342494 RNF182Q8N6D2 247 aa12.32□□□□□ -0.44
UBE3B-202ENST00000342494 BEND2Q8NDZ0 799 aa12.32□□□□□ -0.44
UBE3B-202ENST00000342494 IGKV2-40A0A087WW87 121 aaPredicted RBP12.32□□□□□ -0.44
UBE3B-202ENST00000342494 IGKV2D-40P01614 121 aaPredicted RBP12.32□□□□□ -0.44
UBE3B-202ENST00000342494 RPL23P62829 140 aaKnown RBP12.32□□□□□ -0.44
UBE3B-202ENST00000342494 ORMDL2Q53FV1 153 aa12.32□□□□□ -0.44
UBE3B-202ENST00000342494 ARID2Q68CP9 1835 aa12.32□□□□□ -0.44
UBE3B-202ENST00000342494 TRAV5A0A0B4J249 113 aa12.32□□□□□ -0.44
UBE3B-202ENST00000342494 DDTP30046 118 aa12.32□□□□□ -0.44
UBE3B-202ENST00000342494 SAA4P35542 130 aa12.32□□□□□ -0.44
UBE3B-202ENST00000342494 DOCK6Q96HP0 2047 aa12.32□□□□□ -0.44
UBE3B-202ENST00000342494 MSMBP08118 114 aa12.32□□□□□ -0.44
UBE3B-202ENST00000342494 NR2C2APQ86WQ0 139 aa12.32□□□□□ -0.44
UBE3B-202ENST00000342494 WNK3Q9BYP7 1800 aa12.32□□□□□ -0.44
UBE3B-202ENST00000342494 TMEM155Q4W5P6 130 aa12.31□□□□□ -0.44
UBE3B-202ENST00000342494 PARD6GQ9BYG4 376 aaPredicted RBP12.31□□□□□ -0.44
UBE3B-202ENST00000342494 IGKV1-27A0A075B6S5 117 aa12.31□□□□□ -0.44
UBE3B-202ENST00000342494 SRRM4A7MD48 611 aaKnown RBP12.31□□□□□ -0.44
UBE3B-202ENST00000342494 E7EQL1 145 aa12.31□□□□□ -0.44
UBE3B-202ENST00000342494 C1QTNF9P0C862 333 aa12.31□□□□□ -0.44
UBE3B-202ENST00000342494 C14orf144Q96I85 54 aa12.31□□□□□ -0.44
UBE3B-202ENST00000342494 EVI2AP22794 236 aa12.31□□□□□ -0.44
UBE3B-202ENST00000342494 RPL36AP83881 106 aaKnown RBP12.31□□□□□ -0.44
UBE3B-202ENST00000342494 C9orf139Q6ZV77 190 aa12.31□□□□□ -0.44
UBE3B-202ENST00000342494 TMEM86BQ8N661 226 aa12.31□□□□□ -0.44
UBE3B-202ENST00000342494 RPL36ALQ969Q0 106 aaKnown RBP12.31□□□□□ -0.44
UBE3B-202ENST00000342494 DTX1Q86Y01 620 aa12.31□□□□□ -0.44
UBE3B-202ENST00000342494 IGHV3-73A0A0B4J1V6 119 aa12.3□□□□□ -0.44
UBE3B-202ENST00000342494 H0YJW9 148 aa12.3□□□□□ -0.44
UBE3B-202ENST00000342494 LDLRAD4O15165 306 aa12.3□□□□□ -0.44
UBE3B-202ENST00000342494 FCN3O75636 299 aa12.3□□□□□ -0.44
UBE3B-202ENST00000342494 IGHV3-53P01767 116 aa12.3□□□□□ -0.44
UBE3B-202ENST00000342494 FXYD7P58549 80 aa12.3□□□□□ -0.44
UBE3B-202ENST00000342494 MAPK1IP1LQ8NDC0 245 aa12.3□□□□□ -0.44
UBE3B-202ENST00000342494 ST6GALNAC6Q969X2 333 aa12.3□□□□□ -0.44
UBE3B-202ENST00000342494 COQ2Q96H96 371 aa12.3□□□□□ -0.44
UBE3B-202ENST00000342494 SCRT1Q9BWW7 348 aa12.3□□□□□ -0.44
UBE3B-202ENST00000342494 SLC25A39Q9BZJ4 359 aaPredicted RBP12.3□□□□□ -0.44
UBE3B-202ENST00000342494 OSTCQ9NRP0 149 aa12.3□□□□□ -0.44
UBE3B-202ENST00000342494 GATA3P23771 443 aa12.3□□□□□ -0.44
UBE3B-202ENST00000342494 LYPD2Q6UXB3 125 aa12.3□□□□□ -0.44
UBE3B-202ENST00000342494 TREML4Q6UXN2 200 aa12.3□□□□□ -0.44
UBE3B-202ENST00000342494 MYO7BQ6PIF6 2116 aa12.3□□□□□ -0.44
UBE3B-202ENST00000342494 CLPSP04118 112 aa12.3□□□□□ -0.44
UBE3B-202ENST00000342494 CKS1BP61024 79 aa12.3□□□□□ -0.44
UBE3B-202ENST00000342494 UBE2E2Q96LR5 201 aa12.3□□□□□ -0.44
UBE3B-202ENST00000342494 Q96MF0 132 aa12.3□□□□□ -0.44
UBE3B-202ENST00000342494 RNF126Q9BV68 326 aa12.3□□□□□ -0.44
UBE3B-202ENST00000342494 ZNF236Q9UL36 1845 aa12.3□□□□□ -0.44
UBE3B-202ENST00000342494 GAS1P54826 345 aa12.3□□□□□ -0.44
UBE3B-202ENST00000342494 FAM223BA6NKX1 122 aa12.3□□□□□ -0.44
UBE3B-202ENST00000342494 HBDP02042 147 aa12.3□□□□□ -0.44
UBE3B-202ENST00000342494 FAM223AQ8IWN6 122 aa12.3□□□□□ -0.44
UBE3B-202ENST00000342494 DOCK4Q8N1I0 1966 aa12.29□□□□□ -0.44
UBE3B-202ENST00000342494 TRAV12-3A0A0B4J271 114 aa12.29□□□□□ -0.44
UBE3B-202ENST00000342494 B3GALT5-AS1P59052 145 aa12.29□□□□□ -0.44
UBE3B-202ENST00000342494 PEF1Q9UBV8 284 aaKnown RBP12.29□□□□□ -0.44
UBE3B-202ENST00000342494 TRPM7Q96QT4 1865 aa12.29□□□□□ -0.44
UBE3B-202ENST00000342494 A0A0G2JMZ2 1700 aa12.29□□□□□ -0.44
UBE3B-202ENST00000342494 LRRC37A2A6NM11 1700 aa12.29□□□□□ -0.44
UBE3B-202ENST00000342494 NAPSAO96009 420 aa12.29□□□□□ -0.44
UBE3B-202ENST00000342494 INSP01308 110 aa12.29□□□□□ -0.44
UBE3B-202ENST00000342494 CARHSP1Q9Y2V2 147 aaKnown RBP12.29□□□□□ -0.44
UBE3B-202ENST00000342494 DIDO1Q9BTC0 2240 aaKnown RBP12.28□□□□□ -0.44
UBE3B-202ENST00000342494 A0A0U1RRA0 63 aa12.28□□□□□ -0.44
UBE3B-202ENST00000342494 F8VVB4 439 aa12.28□□□□□ -0.44
UBE3B-202ENST00000342494 F8VWA3 439 aa12.28□□□□□ -0.44
UBE3B-202ENST00000342494 ABCA1O95477 2261 aa12.28□□□□□ -0.44
UBE3B-202ENST00000342494 XIRP1Q702N8 1843 aaKnown RBP12.28□□□□□ -0.44
UBE3B-202ENST00000342494 GREB1LQ9C091 1923 aaPredicted RBP12.28□□□□□ -0.44
UBE3B-202ENST00000342494 A6NNC1 897 aa12.28□□□□□ -0.44
UBE3B-202ENST00000342494 J3QRE1 110 aa12.28□□□□□ -0.44
UBE3B-202ENST00000342494 PRTN3P24158 256 aa12.28□□□□□ -0.44
UBE3B-202ENST00000342494 TDGF1P3P51864 188 aa12.28□□□□□ -0.44
UBE3B-202ENST00000342494 LINC00158P58513 81 aa12.28□□□□□ -0.44
UBE3B-202ENST00000342494 EXOC3-AS1Q8N2X6 119 aa12.28□□□□□ -0.44
UBE3B-202ENST00000342494 C11orf68Q9H3H3 251 aaKnown RBP12.28□□□□□ -0.44
UBE3B-202ENST00000342494 SIGLEC9Q9Y336 463 aa12.28□□□□□ -0.44
UBE3B-202ENST00000342494 GPR179Q6PRD1 2367 aa12.28□□□□□ -0.44
UBE3B-202ENST00000342494 SCN5AQ14524 2016 aa12.28□□□□□ -0.44
UBE3B-202ENST00000342494 CHD5Q8TDI0 1954 aa12.28□□□□□ -0.44
UBE3B-202ENST00000342494 A0A087WWC5 75 aa12.28□□□□□ -0.44
UBE3B-202ENST00000342494 CTAG1AP78358 180 aa12.28□□□□□ -0.44
UBE3B-202ENST00000342494 S100A7L2Q5SY68 101 aa12.28□□□□□ -0.44
UBE3B-202ENST00000342494 FAM169BQ8N8A8 192 aa12.28□□□□□ -0.44
UBE3B-202ENST00000342494 RALGAPA2Q2PPJ7 1873 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms