RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 CD5LO43866 347 aa7.85□□□□□ -1.15
TUBB1-201ENST00000217133 SAA1P0DJI8 122 aaPredicted RBP7.85□□□□□ -1.15
TUBB1-201ENST00000217133 WT1P19544 449 aaPredicted RBP7.85□□□□□ -1.15
TUBB1-201ENST00000217133 HIST1H1AQ02539 215 aaPredicted RBP7.85□□□□□ -1.15
TUBB1-201ENST00000217133 VHLLQ6RSH7 139 aa7.85□□□□□ -1.15
TUBB1-201ENST00000217133 BPIFA4PQ86YQ2 179 aa7.85□□□□□ -1.15
TUBB1-201ENST00000217133 GPR82Q96P67 336 aa7.85□□□□□ -1.15
TUBB1-201ENST00000217133 SPRY4Q9C004 299 aa7.85□□□□□ -1.15
TUBB1-201ENST00000217133 ZNF430Q9H8G1 570 aaPredicted RBP7.85□□□□□ -1.15
TUBB1-201ENST00000217133 HSPB8Q9UJY1 196 aa7.85□□□□□ -1.15
TUBB1-201ENST00000217133 EPDR1Q9UM22 224 aa7.85□□□□□ -1.15
TUBB1-201ENST00000217133 SRRM4A7MD48 611 aaKnown RBP7.84□□□□□ -1.15
TUBB1-201ENST00000217133 VWC2LB2RUY7 222 aa7.84□□□□□ -1.15
TUBB1-201ENST00000217133 NKX2-8O15522 239 aa7.84□□□□□ -1.15
TUBB1-201ENST00000217133 SPRY3O43610 288 aa7.84□□□□□ -1.15
TUBB1-201ENST00000217133 IGKV3-15P01624 115 aa7.84□□□□□ -1.15
TUBB1-201ENST00000217133 OR5AL1P0C617 328 aa7.84□□□□□ -1.15
TUBB1-201ENST00000217133 GPR183P32249 361 aa7.84□□□□□ -1.15
TUBB1-201ENST00000217133 POU2AF1Q16633 256 aa7.84□□□□□ -1.15
TUBB1-201ENST00000217133 C17orf58Q2M2W7 97 aa7.84□□□□□ -1.15
TUBB1-201ENST00000217133 PET117Q6UWS5 81 aa7.84□□□□□ -1.15
TUBB1-201ENST00000217133 HARBI1Q96MB7 349 aa7.84□□□□□ -1.15
TUBB1-201ENST00000217133 ZNF714Q96N38 554 aa7.84□□□□□ -1.15
TUBB1-201ENST00000217133 SSUH2Q9Y2M2 353 aa7.84□□□□□ -1.15
TUBB1-201ENST00000217133 SMG1Q96Q15 3661 aaKnown RBP7.84□□□□□ -1.15
TUBB1-201ENST00000217133 A0A1B0GXF2 115 aa7.84□□□□□ -1.15
TUBB1-201ENST00000217133 GAGE10A6NGK3 116 aa7.84□□□□□ -1.15
TUBB1-201ENST00000217133 HTR1DP28221 377 aa7.84□□□□□ -1.15
TUBB1-201ENST00000217133 RNFT1Q5M7Z0 435 aa7.84□□□□□ -1.15
TUBB1-201ENST00000217133 LINC00305Q7Z4B0 112 aa7.84□□□□□ -1.15
TUBB1-201ENST00000217133 SCNM1Q9BWG6 230 aa7.84□□□□□ -1.15
TUBB1-201ENST00000217133 ZNF835Q9Y2P0 537 aa7.84□□□□□ -1.15
TUBB1-201ENST00000217133 UQCRFS1P47985 274 aa7.84□□□□□ -1.15
TUBB1-201ENST00000217133 ARF6P62330 175 aa7.84□□□□□ -1.15
TUBB1-201ENST00000217133 SSBP2P81877 361 aaPredicted RBP7.84□□□□□ -1.15
TUBB1-201ENST00000217133 MEGF9Q9H1U4 602 aa7.84□□□□□ -1.15
TUBB1-201ENST00000217133 RELNP78509 3460 aa7.83□□□□□ -1.16
TUBB1-201ENST00000217133 C7orf71A4D174 169 aa7.83□□□□□ -1.16
TUBB1-201ENST00000217133 H3BTX0 84 aa7.83□□□□□ -1.16
TUBB1-201ENST00000217133 CRXO43186 299 aaPredicted RBP7.83□□□□□ -1.16
TUBB1-201ENST00000217133 MOSP00540 346 aa7.83□□□□□ -1.16
TUBB1-201ENST00000217133 FAM120AOSQ5T036 256 aa7.83□□□□□ -1.16
TUBB1-201ENST00000217133 OR1B1Q8NGR6 318 aa7.83□□□□□ -1.16
TUBB1-201ENST00000217133 MS4A6AQ9H2W1 248 aa7.83□□□□□ -1.16
TUBB1-201ENST00000217133 C1RLQ9NZP8 487 aa7.83□□□□□ -1.16
TUBB1-201ENST00000217133 SOX21Q9Y651 276 aaPredicted RBP7.83□□□□□ -1.16
TUBB1-201ENST00000217133 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.83□□□□□ -1.16
TUBB1-201ENST00000217133 TRAV8-6A0A0B4J262 113 aa7.83□□□□□ -1.16
TUBB1-201ENST00000217133 PPIAL4DF5H284 164 aa7.83□□□□□ -1.16
TUBB1-201ENST00000217133 CT45A6P0DMU7 189 aa7.83□□□□□ -1.16
TUBB1-201ENST00000217133 CT45A5P0DMU8 189 aa7.83□□□□□ -1.16
TUBB1-201ENST00000217133 CT45A7P0DMV0 189 aa7.83□□□□□ -1.16
TUBB1-201ENST00000217133 COL8A1P27658 744 aa7.83□□□□□ -1.16
TUBB1-201ENST00000217133 REG1BP48304 166 aa7.83□□□□□ -1.16
TUBB1-201ENST00000217133 SUB1P53999 127 aaKnown RBP eCLIP7.83□□□□□ -1.16
TUBB1-201ENST00000217133 CR1LQ2VPA4 569 aa7.83□□□□□ -1.16
TUBB1-201ENST00000217133 VWA1Q6PCB0 445 aa7.83□□□□□ -1.16
TUBB1-201ENST00000217133 RBPMS2Q6ZRY4 209 aaKnown RBP7.83□□□□□ -1.16
TUBB1-201ENST00000217133 LHFPL4Q7Z7J7 247 aa7.83□□□□□ -1.16
TUBB1-201ENST00000217133 ZNRD1Q9P1U0 126 aa7.83□□□□□ -1.16
TUBB1-201ENST00000217133 TMEM178AQ8NBL3 297 aa7.83□□□□□ -1.16
TUBB1-201ENST00000217133 MDS2Q8NDY4 140 aa7.83□□□□□ -1.16
TUBB1-201ENST00000217133 STXBP6Q8NFX7 210 aa7.83□□□□□ -1.16
TUBB1-201ENST00000217133 ITLN1Q8WWA0 313 aa7.83□□□□□ -1.16
TUBB1-201ENST00000217133 FXYD5Q96DB9 178 aa7.83□□□□□ -1.16
TUBB1-201ENST00000217133 SMIM12Q96EX1 92 aa7.83□□□□□ -1.16
TUBB1-201ENST00000217133 PERPQ96FX8 193 aa7.83□□□□□ -1.16
TUBB1-201ENST00000217133 FER1L6-AS2Q96M78 137 aa7.83□□□□□ -1.16
TUBB1-201ENST00000217133 SCRT2Q9NQ03 307 aa7.83□□□□□ -1.16
TUBB1-201ENST00000217133 SELENOKQ9Y6D0 94 aa7.83□□□□□ -1.16
TUBB1-201ENST00000217133 COL27A1Q8IZC6 1860 aaPredicted RBP7.82□□□□□ -1.16
TUBB1-201ENST00000217133 TCRBV4S1A1TA0A5B7 111 aa7.82□□□□□ -1.16
TUBB1-201ENST00000217133 NBEAP1P0C6P0 100 aa7.82□□□□□ -1.16
TUBB1-201ENST00000217133 FAM71F2Q6NXP2 309 aa7.82□□□□□ -1.16
TUBB1-201ENST00000217133 PATE2Q6UY27 113 aa7.82□□□□□ -1.16
TUBB1-201ENST00000217133 ZC2HC1AQ96GY0 325 aa7.82□□□□□ -1.16
TUBB1-201ENST00000217133 NBEAQ8NFP9 2946 aa7.82□□□□□ -1.16
TUBB1-201ENST00000217133 ATRXP46100 2492 aa7.82□□□□□ -1.16
TUBB1-201ENST00000217133 PTPRBP23467 1997 aa7.82□□□□□ -1.16
TUBB1-201ENST00000217133 RIPPLY3P57055 190 aa7.82□□□□□ -1.16
TUBB1-201ENST00000217133 GTF2H5Q6ZYL4 71 aa7.82□□□□□ -1.16
TUBB1-201ENST00000217133 TMUB1Q9BVT8 246 aa7.82□□□□□ -1.16
TUBB1-201ENST00000217133 CSTL1Q9H114 145 aa7.82□□□□□ -1.16
TUBB1-201ENST00000217133 ABCA1O95477 2261 aa7.82□□□□□ -1.16
TUBB1-201ENST00000217133 NBASA2RRP1 2371 aa7.82□□□□□ -1.16
TUBB1-201ENST00000217133 PSMB11A5LHX3 300 aa7.82□□□□□ -1.16
TUBB1-201ENST00000217133 MBNL2Q5VZF2 373 aaKnown RBP7.82□□□□□ -1.16
TUBB1-201ENST00000217133 DUX4L9Q6RFH8 374 aaPredicted RBP7.82□□□□□ -1.16
TUBB1-201ENST00000217133 FA2HQ7L5A8 372 aa7.82□□□□□ -1.16
TUBB1-201ENST00000217133 GTSF1Q8WW33 167 aa7.82□□□□□ -1.16
TUBB1-201ENST00000217133 H1FXQ92522 213 aaKnown RBP7.82□□□□□ -1.16
TUBB1-201ENST00000217133 FNDC4Q9H6D8 234 aaPredicted RBP7.82□□□□□ -1.16
TUBB1-201ENST00000217133 SPRNQ5BIV9 151 aa7.81□□□□□ -1.16
TUBB1-201ENST00000217133 C10orf55Q5SWW7 151 aa7.81□□□□□ -1.16
TUBB1-201ENST00000217133 LINC00322Q6ZN03 302 aaPredicted RBP7.81□□□□□ -1.16
TUBB1-201ENST00000217133 PRSS3P2Q8NHM4 247 aa7.81□□□□□ -1.16
TUBB1-201ENST00000217133 CCL13Q99616 98 aa7.81□□□□□ -1.16
TUBB1-201ENST00000217133 AP5S1Q9NUS5 200 aa7.81□□□□□ -1.16
TUBB1-201ENST00000217133 IGHV1-18A0A0C4DH31 117 aa7.81□□□□□ -1.16
TUBB1-201ENST00000217133 CGB3P0DN86 165 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms