RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Fam222bQ6P539 562 aa5.34□□□□□ -1.55
Lig4-202ENSMUST00000170033 BsxQ810B3 232 aa5.34□□□□□ -1.55
Lig4-202ENSMUST00000170033 Zfp52Q8BJ45 724 aa5.34□□□□□ -1.55
Lig4-202ENSMUST00000170033 Neurl3Q8CJC5 254 aa5.34□□□□□ -1.55
Lig4-202ENSMUST00000170033 Vrk3Q8K3G5 453 aa5.34□□□□□ -1.55
Lig4-202ENSMUST00000170033 Rbpms2Q8VC52 206 aaKnown RBP5.34□□□□□ -1.55
Lig4-202ENSMUST00000170033 Rab40cQ8VHQ4 281 aa5.34□□□□□ -1.55
Lig4-202ENSMUST00000170033 4930544G11RikQ9CR99 193 aa5.34□□□□□ -1.55
Lig4-202ENSMUST00000170033 Rpl7l1Q9D8M4 246 aaKnown RBP5.34□□□□□ -1.55
Lig4-202ENSMUST00000170033 Iqcf5Q9DAL7 148 aa5.34□□□□□ -1.55
Lig4-202ENSMUST00000170033 Sp5Q9JHX2 398 aa5.34□□□□□ -1.55
Lig4-202ENSMUST00000170033 Fbxl17Q9QZN1 701 aa5.34□□□□□ -1.55
Lig4-202ENSMUST00000170033 Vmn1r61W4VSP5 300 aa5.34□□□□□ -1.55
Lig4-202ENSMUST00000170033 Cfap54Q8C6S9 3106 aa5.34□□□□□ -1.55
Lig4-202ENSMUST00000170033 Cep350E9Q309 3095 aa5.34□□□□□ -1.56
Lig4-202ENSMUST00000170033 Ep400Q8CHI8 3072 aaKnown RBP5.34□□□□□ -1.56
Lig4-202ENSMUST00000170033 Olfr248E9Q1L6 309 aa5.34□□□□□ -1.56
Lig4-202ENSMUST00000170033 Vmn1r113G3UWI8 307 aa5.34□□□□□ -1.56
Lig4-202ENSMUST00000170033 Vmn1r117L7N2C9 307 aa5.34□□□□□ -1.56
Lig4-202ENSMUST00000170033 Pax5Q02650 391 aa5.34□□□□□ -1.56
Lig4-202ENSMUST00000170033 Btg2Q04211 158 aa5.34□□□□□ -1.56
Lig4-202ENSMUST00000170033 4930596D02RikQ3V0H9 216 aa5.34□□□□□ -1.56
Lig4-202ENSMUST00000170033 Trdv4Q5R1A3 115 aa5.34□□□□□ -1.56
Lig4-202ENSMUST00000170033 Lefty1Q64280 368 aa5.34□□□□□ -1.56
Lig4-202ENSMUST00000170033 Scrt2Q8BTH6 311 aa5.34□□□□□ -1.56
Lig4-202ENSMUST00000170033 RhbgQ8BUX5 455 aa5.34□□□□□ -1.56
Lig4-202ENSMUST00000170033 Depp1Q8K2F3 205 aa5.34□□□□□ -1.56
Lig4-202ENSMUST00000170033 Vmn1r8Q8R2C2 303 aa5.34□□□□□ -1.56
Lig4-202ENSMUST00000170033 Olfr123Q8VFQ1 309 aa5.34□□□□□ -1.56
Lig4-202ENSMUST00000170033 Egln1Q91YE3 400 aa5.34□□□□□ -1.56
Lig4-202ENSMUST00000170033 Osr2Q91ZD1 312 aa5.34□□□□□ -1.56
Lig4-202ENSMUST00000170033 Vkorc1Q9CRC0 161 aa5.34□□□□□ -1.56
Lig4-202ENSMUST00000170033 Atp6v1fQ9D1K2 119 aa5.34□□□□□ -1.56
Lig4-202ENSMUST00000170033 Arl13aQ9D416 372 aa5.34□□□□□ -1.56
Lig4-202ENSMUST00000170033 Zfand6Q9DCH6 223 aa5.34□□□□□ -1.56
Lig4-202ENSMUST00000170033 Tas2r4Q9JKT3 297 aa5.34□□□□□ -1.56
Lig4-202ENSMUST00000170033 Tnrc18Q80WC3 2878 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Dnah12Q3V0Q1 3086 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Igkv14-100A0A0G2JG36 117 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Gm45753A0A1C7CYU8 86 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Gm17333C6EQI3 125 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Olfr739E9Q1P0 309 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Lrp3E9Q1T6 790 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Tspan15F7BWT7 294 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Gm21761J3QK00 171 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 OtpO09113 325 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 DaoP18894 345 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Slc6a9P28571 692 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Nkx2-1P50220 372 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Vmn1r236Q05A06 334 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Vdac1Q60932 296 aaKnown RBP5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Foxf1Q61080 378 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Zfp455Q7M6X9 461 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Olfr923Q7TRB9 317 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Lhfpl1Q80SV1 220 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Tmem56Q8CGF5 276 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Olfr484Q8VFD3 321 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Olfr1170Q8VFG1 316 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Olfr829Q8VGX1 321 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Scgb1b27Q91WB5 92 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 MrgprgQ91ZB5 289 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Scrt1Q99M85 348 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 MmdQ9CQY7 238 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Rab32Q9CZE3 223 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Trbv13-3A0A0B4J1H2 113 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Olfr455A0A0B4J1M2 317 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Olfr1118A0A0J9YUE7 307 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Ube2dnl1A2AFH1 155 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Gm19345G3UYD9 124 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Olfr62L7MU75 315 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 ApelaP0DMC4 54 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Tpsb2P21845 276 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Cks2P56390 79 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 PmchP56942 165 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Rbp2Q08652 134 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 VwceQ3U515 929 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Cfhr1Q61406 343 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Cd200r1lQ6XJV6 249 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Olfr1396Q7TQS8 315 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 H2-M10.3Q85ZW6 330 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Gm9913Q8BQQ2 135 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Mib2Q8R516 973 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Tlcd2Q8VC26 310 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Olfr279Q8VFD8 310 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Olfr1368Q8VFG3 314 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 GhsrQ99P50 364 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Glo1Q9CPU0 184 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Rhebl1Q9D8T3 184 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Mdp1Q9D967 164 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Lyzl6Q9DA11 148 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Ndufb10Q9DCS9 176 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Il17bQ9QXT6 180 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 CcsQ9WU84 274 aa5.33□□□□□ -1.56
Lig4-202ENSMUST00000170033 Gm10778A0A087WNP5 499 aa5.32□□□□□ -1.56
Lig4-202ENSMUST00000170033 Igkv14-111A0A140T8P9 117 aa5.32□□□□□ -1.56
Lig4-202ENSMUST00000170033 Rhox7aA2A4F1 281 aa5.32□□□□□ -1.56
Lig4-202ENSMUST00000170033 Fthl17bA2AHC5 176 aa5.32□□□□□ -1.56
Lig4-202ENSMUST00000170033 Fthl17cA2AHC6 176 aa5.32□□□□□ -1.56
Lig4-202ENSMUST00000170033 Gm14403A2BFU4 402 aa5.32□□□□□ -1.56
Lig4-202ENSMUST00000170033 Zfp983E9PUT0 460 aa5.32□□□□□ -1.56
Retrieved 100 of 22,080 RNA–protein pairs in 118 ms