RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 IcaQ9DBD0 700 aa18.74■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Ypel1Q9ESC7 118 aa18.74■□□□□ 0.59
Scn1b-201ENSMUST00000098548 FaimQ9WUD8 179 aa18.74■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Olfr427E9Q7E7 315 aa18.73■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Vamp2P63044 116 aa18.73■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Clec12bQ149M0 275 aa18.73■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Tmed3Q78IS1 221 aa18.73■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Rbm14Q8C2Q3 669 aaKnown RBP18.73■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Fxyd1Q9Z239 92 aa18.73■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Bahcc1Q3UHR0 2643 aa18.73■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Akap6E9Q9K8 2307 aa18.73■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Ighv5-12A0A075B5Q4 117 aa18.72■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Zdhhc22A0PK84 263 aa18.72■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Gm10112D3YWP5 117 aa18.72■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Olfr906K7N5P3 311 aa18.72■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Cxcl5P50228 132 aa18.72■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Rab7aP51150 207 aaKnown RBP18.72■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Tmem40Q4FJU9 225 aa18.72■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Zic4Q61467 341 aa18.72■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Znf2Q8BIQ3 427 aa18.72■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Inpp5kQ8C5L6 468 aa18.72■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Gm9837Q8C607 126 aa18.72■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Med28Q920D3 178 aa18.72■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Aifm1Q9Z0X1 612 aa18.72■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Trav6d-5A0A075B6B9 112 aa18.72■□□□□ 0.59
Scn1b-201ENSMUST00000098548 H60bB1B212 251 aa18.72■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Sdc1P18828 311 aa18.72■□□□□ 0.59
Scn1b-201ENSMUST00000098548 CortP56469 109 aa18.72■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Tmem52bQ0VBF2 186 aa18.72■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Ndufs8Q8K3J1 212 aa18.72■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Rpp21Q8R040 150 aa18.72■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Pomt1Q8R2R1 746 aa18.72■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Znrf1Q91V17 227 aa18.72■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Mrpl41Q9CQN7 135 aaKnown RBP18.72■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Immp1lQ9CQU8 166 aa18.72■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Coa3Q9D2R6 108 aa18.72■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Prss37Q9DAA4 237 aa18.72■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Gng12Q9DAS9 72 aa18.72■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Gm572B1ARY8 399 aa18.71■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Gm10073E9Q3T0 114 aa18.71■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Pet117P0DJF2 80 aa18.71■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Cfc1P97766 202 aa18.71■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Prrc1Q3UPH1 443 aa18.71■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Fam220aQ3ZN08 260 aa18.71■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Tmprss13Q5U405 543 aa18.71■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Slc25a41Q8BVN7 312 aa18.71■□□□□ 0.59
Scn1b-201ENSMUST00000098548 A730015C16RikQ8C992 119 aa18.71■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Fn3krpQ8K274 309 aa18.71■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Olfr1279Q8VF38 313 aa18.71■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Celsr2Q9R0M0 2920 aa18.71■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Ighv6-5A0A0A6YWS9 119 aa18.7■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Vmn1r180B9EK86 305 aa18.7■□□□□ 0.58
Scn1b-201ENSMUST00000098548 BC048679D3YXE9 172 aa18.7■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Cryba1P02525 198 aa18.7■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Gimap1P70224 277 aa18.7■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Olfr25Q7TRD6 313 aa18.7■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Nup35Q8R4R6 325 aa18.7■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Olfr1449Q8VEV8 314 aa18.7■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Olfr187Q8VEX6 308 aa18.7■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Cd200r1Q9ES57 326 aa18.7■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Herpud1Q9JJK5 391 aa18.7■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Klk1b27Q9JM71 263 aa18.7■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Arid1bE9Q4N7 2244 aa18.69■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Tmem116A0A0G2JGD3 401 aa18.69■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Olfr555E9Q547 315 aa18.69■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Tspan15F7BWT7 294 aa18.69■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Ppp1ccP63087 323 aa18.69■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Taar3Q5QD16 343 aa18.69■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Reep5Q60870 185 aa18.69■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Olfr153Q7TR48 307 aa18.69■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Tmem106bQ80X71 275 aa18.69■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Q8C4X7 151 aa18.69■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Mmp28Q8CGV8 520 aa18.69■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Plppr2Q8VCY8 343 aa18.69■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Olfr470Q8VF65 314 aa18.69■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Olfr1413Q8VGU3 323 aa18.69■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Rnf141Q99MB7 230 aa18.69■□□□□ 0.58
Scn1b-201ENSMUST00000098548 PyyQ9EPS2 98 aa18.69■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Hsf4Q9R0L1 492 aa18.69■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Gm21095A0A087WR14 222 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Ighv1-47A0A0A6YY41 117 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Olfr1098A2AVB0 315 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Rdh16O54909 317 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Gpr12P35412 334 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Tpsab1Q02844 273 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Trdv4Q5R1A3 115 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Pom121l2Q5SW25 972 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Olfr1362Q5SZZ8 308 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Krt33bQ61897 404 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Olfr1385Q7TQT1 309 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Olfr1137Q7TR40 310 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Tox3Q80W03 575 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Dctn4Q8CBY8 467 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Mr1Q8HWB0 341 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Olfr523Q8VFE7 317 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Olfr76Q8VFV2 317 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Rab40cQ8VHQ4 281 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 Ndufa5Q9CPP6 116 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 H2afb1Q9CQ70 111 aa18.68■□□□□ 0.58
Scn1b-201ENSMUST00000098548 CutcQ9D8X1 272 aa18.68■□□□□ 0.58
Retrieved 100 of 22,080 RNA–protein pairs in 32.1 ms