RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Lrtm2Q8BGX3 370 aa8.28□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Olfr1259Q8VEZ1 309 aa8.28□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 S1pr5Q91X56 400 aa8.28□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Shisal2bQ9D1Y9 158 aa8.28□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Muc3E9PWP7 378 aa8.28□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Tnfsf12O54907 249 aa8.28□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 GzmfP08883 248 aa8.28□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Mpc1P63030 109 aa8.28□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Dlx4P70436 240 aa8.28□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Tex52Q3TTI8 308 aa8.28□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Fam160a2Q3U2I3 975 aa8.28□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Tmem212Q8C6V3 187 aa8.28□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Olfr1445Q8VFW9 314 aa8.28□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Hils1Q9QYL0 170 aa8.28□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Slc25a10Q9QZD8 287 aa8.28□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 AspmQ8CJ27 3122 aa8.28□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Frem1Q684R7 2191 aa8.28□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Usf3B2RUQ2 2221 aa8.27□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Igkv6-14A0A140T8P1 115 aa8.27□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 4930435E12RikA6X8Z9 381 aa8.27□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Olfr1406E9Q8X1 310 aa8.27□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Gm28051J3QMA2 81 aa8.27□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Atpif1O35143 106 aa8.27□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Prodh2Q8VCZ9 456 aa8.27□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 CenpeQ6RT24 2474 aaKnown RBP8.27□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Lrp4Q8VI56 1905 aa8.27□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Lama1P19137 3084 aa8.27□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Dcaf10A2AKB9 566 aa8.27□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 P01806 116 aa8.27□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Ren1P06281 402 aa8.27□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 GrnP28798 589 aaKnown RBP8.27□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Hist1h1eP43274 219 aaKnown RBP8.27□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Spam1P48794 512 aa8.27□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Reg2Q08731 173 aa8.27□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Ubald1Q6P3B2 176 aa8.27□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 LgalslbQ7TPX9 165 aa8.27□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Q8CF25 301 aa8.27□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Commd9Q8K2Q0 198 aa8.27□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Etfrf1Q91V16 86 aa8.27□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Ms4a3Q920C4 213 aa8.27□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Tmem107Q9CPV0 140 aa8.27□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Smim8Q9CQQ0 97 aa8.27□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Alkbh4Q9D8F1 300 aa8.27□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Mlf1Q9QWV4 267 aa8.27□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Klri1B2KG20 248 aa8.27□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Gm5218F6YH22 154 aa8.27□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 9130019O22RikG3X941 543 aa8.27□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Vmn1r128L7N2B4 307 aa8.27□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Meox1P32442 253 aa8.27□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Gm10309Q8C648 119 aa8.27□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Olfr1202Q8VF98 309 aa8.27□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Olfr1392Q8VFA6 311 aa8.27□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Vkorc1Q9CRC0 161 aa8.27□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 SrfQ9JM73 504 aa8.27□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Mecp2Q9Z2D6 484 aaKnown RBP8.27□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Gm28372A0A087WNV0 220 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Igkv1-132A0A0B4J1H9 120 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Igkv12-89A0A0G2JGW8 112 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 A0A1Y7VLU2 103 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Foxh1O88621 401 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Hist1h2bmP10854 126 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 SellP18337 372 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Olfr1537P34983 314 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Sox15P43267 231 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Sssca1P56873 199 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Cd59bP58019 129 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Dynlrb1P62627 96 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Gm5615Q3UW02 101 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Hist1h2bhQ64478 126 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Hist2h2bbQ64525 126 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Hist1h2bcQ6ZWY9 126 aaKnown RBP8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Zfp729bQ80VN4 1045 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Q8CDS7 251 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Olfr770Q8VGC2 311 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Rwdd3Q8VIL2 267 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Pcsk5Q04592 1877 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Ighv6-3A0A075B5T2 118 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Trav18A0A075B656 109 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Gm21778A0A087WNP8 232 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Olfr175-ps1A0A140T8K4 308 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Olfr1496B9EHG2 317 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Olfr1220F7BL62 311 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Olfr624F8VQI7 308 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 P01804 111 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Rtl6Q505G4 243 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Vkorc1l1Q6TEK5 176 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Gucd1Q8BZI6 239 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Cdc34Q8CFI2 235 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Scgb1b27Q91WB5 92 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Mad2l1bpQ9DCX1 276 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Tsc22d4Q9EQN3 387 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Gm12728V9GX31 77 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 VhlP40338 181 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 CiartQ3TQ03 375 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Taar9Q5QD04 348 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Mindy2Q6PDI6 601 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Henmt1Q8CAE2 395 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 TprkbQ8QZZ7 175 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 IdnkQ8R0J8 184 aa8.26□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Olfr1475Q8VEV6 314 aa8.26□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 31.8 ms