RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Tmem42Q9CR22 157 aa8.59□□□□□ -1.03
Ldlr-201ENSMUST00000034713 Cox20Q9D7J4 117 aa8.59□□□□□ -1.03
Ldlr-201ENSMUST00000034713 Fgf16Q9ESL8 207 aa8.59□□□□□ -1.03
Ldlr-201ENSMUST00000034713 Olfr154Q9QY00 318 aa8.59□□□□□ -1.03
Ldlr-201ENSMUST00000034713 Igkv9-124A0A0G2JDR3 117 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Platr25A0A1Y7VIZ1 466 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Mex3aG3UYU0 520 aaKnown RBP8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Saa1P05366 122 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 CortP56469 109 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Obox7Q4KL20 218 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Rnd1Q8BLR7 232 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Pnpla3Q91WW7 413 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Tbx19Q99ME7 446 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Mad2l1bpQ9DCX1 276 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Ramp3Q9WUP1 147 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Gm21778A0A087WNP8 232 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Gm10439A2AJU2 433 aaKnown RBP8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Samt3A2ARK7 233 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Gm15114B1B0X6 433 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Scgb2a2J3KMP9 96 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Gm20877J3QPZ4 227 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Gm10665K7N6B7 321 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Hoxa3P02831 443 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Ren1P06281 402 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Cxcl1P12850 96 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Slc25a5P51881 298 aaKnown RBP8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Sssca1P56873 199 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Nhlh2Q64221 135 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Fam234aQ8C0Z1 555 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Hsd17b13Q8VCR2 304 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 H1fooQ8VIK3 304 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Ppp1r27Q9D119 154 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Fbxo24Q9D417 589 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 BlnkQ9QUN3 457 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Olfr1264Q9R0K2 308 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Awat1A2ADU9 328 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Olfr609E9Q4X7 319 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Mc5rP41149 325 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Ier3P46694 153 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Ppp1ccP63087 323 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Ube2l3P68037 154 aaKnown RBP8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 EcscrQ3TZW0 214 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 SprnQ8BWU1 147 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 TskuQ8CBR6 354 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Plxdc1Q91ZV7 500 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Chst1Q9EQC0 411 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 SelenofQ9ERR7 162 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Rnf212F6TQD1 307 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Sod1P08228 154 aaKnown RBP8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Rpl13aP19253 203 aaKnown RBP8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Spam1P48794 512 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Trav6-2Q5R1I4 113 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 SepsecsQ6P6M7 504 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Olfr874Q7TRE6 310 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Olfr493Q8VEW5 314 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Ms4a6cQ99N08 217 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Q9D7E4 109 aa8.58□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Gm10097J3KMK7 105 aa8.57□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Aqp7O54794 303 aa8.57□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Tesk1O70146 627 aa8.57□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Oas1bQ60856 376 aa8.57□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Cd55bQ61476 407 aa8.57□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Plrg1Q922V4 513 aaKnown RBP8.57□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Ca15Q99N23 324 aa8.57□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Gm20830J3KML6 227 aa8.57□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Csrp1P97315 193 aaKnown RBP8.57□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Vdac1Q60932 296 aaKnown RBP8.57□□□□□ -1.04
Ldlr-201ENSMUST00000034713 PnkdQ69ZP3 385 aa8.57□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Ifna12Q80SS5 189 aa8.57□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Gm5111Q8C9M4 190 aa8.57□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Olfr1009Q8VFK1 314 aa8.57□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Defb8Q91V82 60 aa8.57□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Zfp931A2AHM2 298 aa8.57□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Shisa3Q3UPR0 238 aa8.57□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Zdhhc23Q5Y5T3 425 aa8.57□□□□□ -1.04
Ldlr-201ENSMUST00000034713 PtafrQ62035 341 aa8.57□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Lrfn3Q8BLY3 626 aa8.57□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Vash2Q8C5G2 355 aa8.57□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Gm10309Q8C648 119 aa8.57□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Stpg2Q8C8J0 561 aa8.57□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Olfr435Q8VFS3 313 aa8.57□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Smim8Q9CQQ0 97 aa8.57□□□□□ -1.04
Ldlr-201ENSMUST00000034713 4930412O13RikQ9D5M9 106 aa8.57□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Snrnp200Q6P4T2 2136 aaKnown RBP8.57□□□□□ -1.04
Ldlr-201ENSMUST00000034713 1810011H11RikE9PVZ2 95 aa8.57□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Olfr178E9Q9T3 319 aa8.57□□□□□ -1.04
Ldlr-201ENSMUST00000034713 PpicP30412 212 aaKnown RBP8.57□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Hist1h1eP43274 219 aaKnown RBP8.57□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Col9a1Q05722 921 aa8.57□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Cln5Q3UMW8 341 aa8.57□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Coq2Q66JT7 374 aa8.57□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Vstm2lQ6PDS0 220 aa8.57□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Znf385aQ8VD12 386 aaKnown RBP8.57□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Lipt2Q9D009 231 aa8.57□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Cml3Q9JIY8 226 aa8.57□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Plxna4Q80UG2 1893 aa8.57□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Ighv1-47A0A0A6YY41 117 aa8.56□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Olfr1116E9PXB8 307 aa8.56□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Wnt2bO70283 389 aa8.56□□□□□ -1.04
Ldlr-201ENSMUST00000034713 Ccl1P10146 92 aa8.56□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 33.8 ms