RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Stac2Q8R1B0 408 aa13.85□□□□□ -0.19
Shh-201ENSMUST00000002708 Mettl21AQ9CQL0 218 aa13.85□□□□□ -0.19
Shh-201ENSMUST00000002708 Pcnx2Q5DU28 2122 aa13.85□□□□□ -0.19
Shh-201ENSMUST00000002708 Pglyrp3A1A547 347 aa13.85□□□□□ -0.19
Shh-201ENSMUST00000002708 Prss35Q8C0F9 409 aa13.85□□□□□ -0.19
Shh-201ENSMUST00000002708 RetnlgQ8K426 117 aa13.85□□□□□ -0.19
Shh-201ENSMUST00000002708 Map1lc3bQ9CQV6 125 aa13.85□□□□□ -0.19
Shh-201ENSMUST00000002708 Slc50a1Q9CXK4 221 aa13.85□□□□□ -0.19
Shh-201ENSMUST00000002708 Sfrp4Q9Z1N6 351 aa13.85□□□□□ -0.19
Shh-201ENSMUST00000002708 Cacna1gQ5SUF7 2381 aa13.84□□□□□ -0.19
Shh-201ENSMUST00000002708 Gm45871A0A1B0GRI9 540 aa13.84□□□□□ -0.19
Shh-201ENSMUST00000002708 Gm5108J3QP01 101 aa13.84□□□□□ -0.19
Shh-201ENSMUST00000002708 Gm3486L7N2D0 199 aa13.84□□□□□ -0.19
Shh-201ENSMUST00000002708 Alox12bO70582 701 aa13.84□□□□□ -0.19
Shh-201ENSMUST00000002708 Htr5aP30966 357 aa13.84□□□□□ -0.19
Shh-201ENSMUST00000002708 Psg27Q497W2 474 aa13.84□□□□□ -0.19
Shh-201ENSMUST00000002708 Tmem256Q5F285 113 aa13.84□□□□□ -0.19
Shh-201ENSMUST00000002708 Reep5Q60870 185 aa13.84□□□□□ -0.19
Shh-201ENSMUST00000002708 Gm17324Q8C6J8 137 aa13.84□□□□□ -0.19
Shh-201ENSMUST00000002708 Olfr507Q8VG13 316 aa13.84□□□□□ -0.19
Shh-201ENSMUST00000002708 Olfr362Q8VGV7 317 aa13.84□□□□□ -0.19
Shh-201ENSMUST00000002708 Tmprss11dQ8VHK8 417 aa13.84□□□□□ -0.19
Shh-201ENSMUST00000002708 Flywch2Q9CQE9 139 aa13.84□□□□□ -0.19
Shh-201ENSMUST00000002708 Ndufb10Q9DCS9 176 aa13.84□□□□□ -0.19
Shh-201ENSMUST00000002708 Amy2a1E9PV85 245 aa13.84□□□□□ -0.19
Shh-201ENSMUST00000002708 Fut9O88819 359 aa13.84□□□□□ -0.19
Shh-201ENSMUST00000002708 Olfr139Q60891 315 aa13.84□□□□□ -0.19
Shh-201ENSMUST00000002708 6030452D12RikQ8CD33 222 aa13.84□□□□□ -0.19
Shh-201ENSMUST00000002708 Olfr281Q8VET6 311 aa13.84□□□□□ -0.19
Shh-201ENSMUST00000002708 Olfr523Q8VFE7 317 aa13.84□□□□□ -0.19
Shh-201ENSMUST00000002708 Olfr979Q8VH10 311 aa13.84□□□□□ -0.19
Shh-201ENSMUST00000002708 Mrpl51Q9CPY1 128 aa13.84□□□□□ -0.19
Shh-201ENSMUST00000002708 Vmn1r41Q9EQ44 310 aa13.84□□□□□ -0.19
Shh-201ENSMUST00000002708 PkdrejQ9Z0T6 2126 aa13.84□□□□□ -0.19
Shh-201ENSMUST00000002708 Syngr4Q9Z1L2 233 aa13.84□□□□□ -0.19
Shh-201ENSMUST00000002708 Kiaa1549Q68FD9 1940 aa13.84□□□□□ -0.19
Shh-201ENSMUST00000002708 Igkv5-37A0A140T8N4 115 aa13.83□□□□□ -0.19
Shh-201ENSMUST00000002708 Olfr1496B9EHG2 317 aa13.83□□□□□ -0.19
Shh-201ENSMUST00000002708 GferP56213 198 aa13.83□□□□□ -0.19
Shh-201ENSMUST00000002708 Ccr8P56484 353 aa13.83□□□□□ -0.19
Shh-201ENSMUST00000002708 Tcl1b2P56841 117 aa13.83□□□□□ -0.19
Shh-201ENSMUST00000002708 Mpc1P63030 109 aa13.83□□□□□ -0.19
Shh-201ENSMUST00000002708 Ccl7Q03366 97 aa13.83□□□□□ -0.19
Shh-201ENSMUST00000002708 Il22ra2Q80XF5 230 aa13.83□□□□□ -0.19
Shh-201ENSMUST00000002708 Srsf7Q8BL97 267 aaKnown RBP13.83□□□□□ -0.19
Shh-201ENSMUST00000002708 Olfr1202Q8VF98 309 aa13.83□□□□□ -0.19
Shh-201ENSMUST00000002708 Olfr490Q8VFD2 314 aa13.83□□□□□ -0.19
Shh-201ENSMUST00000002708 Scgb1b12A0A087WP21 93 aa13.83□□□□□ -0.2
Shh-201ENSMUST00000002708 Lhx4P53776 390 aa13.83□□□□□ -0.2
Shh-201ENSMUST00000002708 Trat1Q3UU67 187 aa13.83□□□□□ -0.2
Shh-201ENSMUST00000002708 Lrrc30Q3UV48 300 aa13.83□□□□□ -0.2
Shh-201ENSMUST00000002708 BC100530Q497J0 97 aa13.83□□□□□ -0.2
Shh-201ENSMUST00000002708 Olfr93Q6UAH1 312 aa13.83□□□□□ -0.2
Shh-201ENSMUST00000002708 Zfp85Q7TMC9 473 aa13.83□□□□□ -0.2
Shh-201ENSMUST00000002708 Prss33Q80WM7 277 aa13.83□□□□□ -0.2
Shh-201ENSMUST00000002708 Tmem212Q8C6V3 187 aa13.83□□□□□ -0.2
Shh-201ENSMUST00000002708 Olfr1170Q8VFG1 316 aa13.83□□□□□ -0.2
Shh-201ENSMUST00000002708 Ms4a6bQ99N09 244 aa13.83□□□□□ -0.2
Shh-201ENSMUST00000002708 Slc31a2Q9CPU9 143 aa13.83□□□□□ -0.2
Shh-201ENSMUST00000002708 Fam241aQ9CZL2 131 aa13.83□□□□□ -0.2
Shh-201ENSMUST00000002708 Tmem170aQ9D342 144 aa13.83□□□□□ -0.2
Shh-201ENSMUST00000002708 Fndc10A2A9Q0 223 aa13.82□□□□□ -0.2
Shh-201ENSMUST00000002708 Sesn1P58006 492 aa13.82□□□□□ -0.2
Shh-201ENSMUST00000002708 Kazald1Q8BJ66 313 aa13.82□□□□□ -0.2
Shh-201ENSMUST00000002708 Rab40cQ8VHQ4 281 aa13.82□□□□□ -0.2
Shh-201ENSMUST00000002708 Uqcc1Q9CWU6 295 aa13.82□□□□□ -0.2
Shh-201ENSMUST00000002708 Ppp1r27Q9D119 154 aa13.82□□□□□ -0.2
Shh-201ENSMUST00000002708 Olfr926Q9EQ98 308 aa13.82□□□□□ -0.2
Shh-201ENSMUST00000002708 P01728 117 aa13.82□□□□□ -0.2
Shh-201ENSMUST00000002708 Hsf1P38532 525 aa13.82□□□□□ -0.2
Shh-201ENSMUST00000002708 Asphd1Q2TA57 360 aa13.82□□□□□ -0.2
Shh-201ENSMUST00000002708 Vmn1r225Q8R2A5 298 aa13.82□□□□□ -0.2
Shh-201ENSMUST00000002708 Glrx2Q923X4 156 aa13.82□□□□□ -0.2
Shh-201ENSMUST00000002708 Bbc3Q99ML1 193 aa13.82□□□□□ -0.2
Shh-201ENSMUST00000002708 Rnd2Q9QYM5 227 aa13.82□□□□□ -0.2
Shh-201ENSMUST00000002708 Olfr1326-ps1A0A140T8J7 311 aa13.82□□□□□ -0.2
Shh-201ENSMUST00000002708 Cpsf4lE9Q2N0 280 aa13.82□□□□□ -0.2
Shh-201ENSMUST00000002708 Dkk1O54908 272 aa13.82□□□□□ -0.2
Shh-201ENSMUST00000002708 Adcyap1O70176 175 aa13.82□□□□□ -0.2
Shh-201ENSMUST00000002708 P01803 113 aa13.82□□□□□ -0.2
Shh-201ENSMUST00000002708 PmchP56942 165 aa13.82□□□□□ -0.2
Shh-201ENSMUST00000002708 Idh3gP70404 393 aa13.82□□□□□ -0.2
Shh-201ENSMUST00000002708 Ctxn2Q3URE8 81 aa13.82□□□□□ -0.2
Shh-201ENSMUST00000002708 ParlQ5XJY4 377 aa13.82□□□□□ -0.2
Shh-201ENSMUST00000002708 Olfr907Q7TRC7 310 aa13.82□□□□□ -0.2
Shh-201ENSMUST00000002708 Rwdd3Q8VIL2 267 aa13.82□□□□□ -0.2
Shh-201ENSMUST00000002708 Fbxo24Q9D417 589 aa13.82□□□□□ -0.2
Shh-201ENSMUST00000002708 Nek7Q9ES74 302 aa13.82□□□□□ -0.2
Shh-201ENSMUST00000002708 Cacna1iE9Q7P2 2199 aa13.81□□□□□ -0.2
Shh-201ENSMUST00000002708 Igkv6-23A0A140T8N5 115 aa13.81□□□□□ -0.2
Shh-201ENSMUST00000002708 Gpr183Q3U6B2 357 aa13.81□□□□□ -0.2
Shh-201ENSMUST00000002708 Lcn10Q810Z1 182 aa13.81□□□□□ -0.2
Shh-201ENSMUST00000002708 Lhfpl2Q8BGA2 222 aa13.81□□□□□ -0.2
Shh-201ENSMUST00000002708 Olfr116Q923Q6 321 aa13.81□□□□□ -0.2
Shh-201ENSMUST00000002708 Znf672Q99LH4 468 aa13.81□□□□□ -0.2
Shh-201ENSMUST00000002708 Pip4p2Q9CZX7 257 aa13.81□□□□□ -0.2
Shh-201ENSMUST00000002708 Vamp5Q9Z2P8 102 aa13.81□□□□□ -0.2
Shh-201ENSMUST00000002708 Igkv4-80A0A075B5L7 116 aa13.81□□□□□ -0.2
Shh-201ENSMUST00000002708 Esp8F7AMQ8 149 aa13.81□□□□□ -0.2
Shh-201ENSMUST00000002708 Csn2P10598 231 aa13.81□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 36.8 ms