RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 SMR3BP02814 79 aaPredicted RBP12.64□□□□□ -0.39
CLN6-212ENST00000636020 F2RP25116 425 aa12.64□□□□□ -0.39
CLN6-212ENST00000636020 FUSP35637 526 aaKnown RBP eCLIP12.64□□□□□ -0.39
CLN6-212ENST00000636020 LPAR6P43657 344 aa12.64□□□□□ -0.39
CLN6-212ENST00000636020 RORCP51449 518 aa12.64□□□□□ -0.39
CLN6-212ENST00000636020 FXYD4P59646 89 aa12.64□□□□□ -0.39
CLN6-212ENST00000636020 GLMPQ8WWB7 406 aa12.64□□□□□ -0.39
CLN6-212ENST00000636020 FCAMRQ8WWV6 532 aa12.64□□□□□ -0.39
CLN6-212ENST00000636020 C17orf77Q96MU5 243 aa12.64□□□□□ -0.39
CLN6-212ENST00000636020 PDCD5O14737 125 aa12.63□□□□□ -0.39
CLN6-212ENST00000636020 HOXA1P49639 335 aaPredicted RBP12.63□□□□□ -0.39
CLN6-212ENST00000636020 AP2S1P53680 142 aaPredicted RBP12.63□□□□□ -0.39
CLN6-212ENST00000636020 GNG2P59768 71 aa12.63□□□□□ -0.39
CLN6-212ENST00000636020 C16orf54Q6UWD8 224 aa12.63□□□□□ -0.39
CLN6-212ENST00000636020 SSX7Q7RTT5 188 aa12.63□□□□□ -0.39
CLN6-212ENST00000636020 C1orf158Q8N1D5 194 aa12.63□□□□□ -0.39
CLN6-212ENST00000636020 Q9H3A6 140 aa12.63□□□□□ -0.39
CLN6-212ENST00000636020 NOTOA8MTQ0 251 aa12.62□□□□□ -0.39
CLN6-212ENST00000636020 IGKV3-20P01619 116 aa12.62□□□□□ -0.39
CLN6-212ENST00000636020 GDF5OSQ5U4N7 250 aa12.62□□□□□ -0.39
CLN6-212ENST00000636020 SFXN4Q6P4A7 337 aa12.62□□□□□ -0.39
CLN6-212ENST00000636020 ZNF709Q8N972 641 aa12.62□□□□□ -0.39
CLN6-212ENST00000636020 BEST4Q8NFU0 473 aa12.62□□□□□ -0.39
CLN6-212ENST00000636020 TSC22D3Q99576 134 aa12.62□□□□□ -0.39
CLN6-212ENST00000636020 NKX2-1P43699 371 aaPredicted RBP12.61□□□□□ -0.39
CLN6-212ENST00000636020 USF2Q15853 346 aaPredicted RBP12.61□□□□□ -0.39
CLN6-212ENST00000636020 RRN3P1Q2M238 152 aa12.61□□□□□ -0.39
CLN6-212ENST00000636020 TMEM17Q86X19 198 aa12.61□□□□□ -0.39
CLN6-212ENST00000636020 CROCCP3Q8IVE0 287 aa12.61□□□□□ -0.39
CLN6-212ENST00000636020 MCFD2Q8NI22 146 aa12.61□□□□□ -0.39
CLN6-212ENST00000636020 TMEM230Q96A57 120 aa12.61□□□□□ -0.39
CLN6-212ENST00000636020 ZNF503Q96F45 646 aa12.61□□□□□ -0.39
CLN6-212ENST00000636020 GOLT1BQ9Y3E0 138 aa12.61□□□□□ -0.39
CLN6-212ENST00000636020 FAM229AH3BQW9 127 aa12.6□□□□□ -0.39
CLN6-212ENST00000636020 PGLYRP1O75594 196 aaPredicted RBP12.6□□□□□ -0.39
CLN6-212ENST00000636020 RLN1P04808 185 aa12.6□□□□□ -0.39
CLN6-212ENST00000636020 DEFB1P60022 68 aa12.6□□□□□ -0.39
CLN6-212ENST00000636020 ERHP84090 104 aaKnown RBP12.6□□□□□ -0.39
CLN6-212ENST00000636020 PRCDQ00LT1 54 aa12.6□□□□□ -0.39
CLN6-212ENST00000636020 SERTAD4-AS1Q5TG53 156 aa12.6□□□□□ -0.39
CLN6-212ENST00000636020 LGALS14Q8TCE9 139 aa12.6□□□□□ -0.39
CLN6-212ENST00000636020 CLUHP3Q96NS8 147 aa12.6□□□□□ -0.39
CLN6-212ENST00000636020 NRN1Q9NPD7 142 aa12.6□□□□□ -0.39
CLN6-212ENST00000636020 MRPL36Q9P0J6 103 aaKnown RBP12.6□□□□□ -0.39
CLN6-212ENST00000636020 A0A1W2PPQ1 181 aa12.59□□□□□ -0.39
CLN6-212ENST00000636020 F5H768 121 aa12.59□□□□□ -0.39
CLN6-212ENST00000636020 TMEM127O75204 238 aa12.59□□□□□ -0.39
CLN6-212ENST00000636020 CLN5O75503 358 aa12.59□□□□□ -0.39
CLN6-212ENST00000636020 KRTAP10-1P60331 282 aa12.59□□□□□ -0.39
CLN6-212ENST00000636020 CLINT1Q14677 625 aa12.59□□□□□ -0.39
CLN6-212ENST00000636020 IDNKQ5T6J7 187 aa12.59□□□□□ -0.39
CLN6-212ENST00000636020 CDPF1Q6NVV7 123 aa12.59□□□□□ -0.39
CLN6-212ENST00000636020 RNF141Q8WVD5 230 aa12.59□□□□□ -0.39
CLN6-212ENST00000636020 AP3S1Q92572 193 aa12.59□□□□□ -0.39
CLN6-212ENST00000636020 DAPK2Q9UIK4 370 aa12.59□□□□□ -0.39
CLN6-212ENST00000636020 IGKV1-17P01599 117 aa12.58□□□□□ -0.4
CLN6-212ENST00000636020 HSPE1P61604 102 aaKnown RBP12.58□□□□□ -0.4
CLN6-212ENST00000636020 Q6ZRN7 208 aaPredicted RBP12.58□□□□□ -0.4
CLN6-212ENST00000636020 LINC00299Q6ZSB3 139 aa12.58□□□□□ -0.4
CLN6-212ENST00000636020 Q6ZSN1 163 aa12.58□□□□□ -0.4
CLN6-212ENST00000636020 HOGA1Q86XE5 327 aa12.58□□□□□ -0.4
CLN6-212ENST00000636020 C7orf50Q9BRJ6 194 aaKnown RBP12.58□□□□□ -0.4
CLN6-212ENST00000636020 SLC35B3Q9H1N7 401 aa12.58□□□□□ -0.4
CLN6-212ENST00000636020 BORCS5Q969J3 196 aa12.57□□□□□ -0.4
CLN6-212ENST00000636020 MIXL1Q9H2W2 232 aa12.57□□□□□ -0.4
CLN6-212ENST00000636020 SAV1Q9H4B6 383 aaPredicted RBP12.57□□□□□ -0.4
CLN6-212ENST00000636020 LRP1Q07954 4544 aaKnown RBP12.56□□□□□ -0.4
CLN6-212ENST00000636020 LYRM9A8MSI8 78 aa12.56□□□□□ -0.4
CLN6-212ENST00000636020 KRTAP29-1A8MX34 341 aaPredicted RBP12.56□□□□□ -0.4
CLN6-212ENST00000636020 CTDSP2O14595 271 aa12.56□□□□□ -0.4
CLN6-212ENST00000636020 HNRNPCP07910 306 aaKnown RBP eCLIP12.56□□□□□ -0.4
CLN6-212ENST00000636020 DEFB130BP0DP73 79 aa12.56□□□□□ -0.4
CLN6-212ENST00000636020 DEFB130AP0DP74 79 aa12.56□□□□□ -0.4
CLN6-212ENST00000636020 ICAM4Q14773 271 aa12.56□□□□□ -0.4
CLN6-212ENST00000636020 MLANAQ16655 118 aa12.56□□□□□ -0.4
CLN6-212ENST00000636020 OR4X1Q8NH49 305 aa12.56□□□□□ -0.4
CLN6-212ENST00000636020 OR4A16Q8NH70 328 aa12.56□□□□□ -0.4
CLN6-212ENST00000636020 FNDC4Q9H6D8 234 aaPredicted RBP12.56□□□□□ -0.4
CLN6-212ENST00000636020 ZNF586Q9NXT0 402 aa12.56□□□□□ -0.4
CLN6-212ENST00000636020 SCGNO76038 276 aa12.55□□□□□ -0.4
CLN6-212ENST00000636020 SCAND1P57086 179 aa12.55□□□□□ -0.4
CLN6-212ENST00000636020 TIGITQ495A1 244 aa12.55□□□□□ -0.4
CLN6-212ENST00000636020 MZT2AQ6P582 158 aa12.55□□□□□ -0.4
CLN6-212ENST00000636020 FOXI2Q6ZQN5 318 aa12.55□□□□□ -0.4
CLN6-212ENST00000636020 SYT8Q8NBV8 401 aa12.55□□□□□ -0.4
CLN6-212ENST00000636020 OR4B1Q8NGF8 309 aa12.55□□□□□ -0.4
CLN6-212ENST00000636020 OR5H6Q8NGV6 325 aa12.55□□□□□ -0.4
CLN6-212ENST00000636020 DNAH8Q96JB1 4490 aa12.55□□□□□ -0.4
CLN6-212ENST00000636020 SNCAP37840 140 aa12.54□□□□□ -0.4
CLN6-212ENST00000636020 LINC00315P59091 139 aa12.54□□□□□ -0.4
CLN6-212ENST00000636020 HERV-K104P61576 105 aa12.54□□□□□ -0.4
CLN6-212ENST00000636020 PSG9Q00887 426 aa12.54□□□□□ -0.4
CLN6-212ENST00000636020 ZNF79Q15937 498 aa12.54□□□□□ -0.4
CLN6-212ENST00000636020 SIGLEC15Q6ZMC9 328 aa12.54□□□□□ -0.4
CLN6-212ENST00000636020 SEC22AQ96IW7 307 aa12.54□□□□□ -0.4
CLN6-212ENST00000636020 UPK3BQ9BT76 320 aa12.54□□□□□ -0.4
CLN6-212ENST00000636020 MAGT1Q9H0U3 335 aa12.54□□□□□ -0.4
CLN6-212ENST00000636020 COMMD3Q9UBI1 195 aa12.54□□□□□ -0.4
CLN6-212ENST00000636020 CORTO00230 105 aa12.53□□□□□ -0.4
CLN6-212ENST00000636020 HPGDSO60760 199 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms