RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 PRNDQ9UKY0 176 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 RAB21Q9UL25 225 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 HHLA3Q9XRX5 114 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 RCL1Q9Y2P8 373 aaKnown RBP1.53□□□□□ -2.16
CPNE3-211ENST00000621526 KCNK7Q9Y2U2 307 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 ICOSQ9Y6W8 199 aa1.53□□□□□ -2.16
CPNE3-211ENST00000621526 TRAV8-3A0A0A6YYJ7 113 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 IGHV3-38A0A0C4DH36 116 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 GAGE12BA1L429 117 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 AQP12BA6NM10 295 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 CORTO00230 105 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 SOCS3O14543 225 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 TAAR5O14804 337 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 GAGE7O76087 117 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 LALBAP00709 142 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 IGKV1-17P01599 117 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 GAGE12FP0CL80 117 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 GAGE12GP0CL81 117 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 GAGE12IP0CL82 117 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 ELK1P19419 428 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 PSMB9P28065 219 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 NUP62P37198 522 aaPredicted RBP1.52□□□□□ -2.17
CPNE3-211ENST00000621526 MEOX2P50222 304 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 GTF2A1P52655 376 aaPredicted RBP1.52□□□□□ -2.17
CPNE3-211ENST00000621526 PPP5CP53041 499 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 SUB1P53999 127 aaKnown RBP eCLIP1.52□□□□□ -2.17
CPNE3-211ENST00000621526 SCAND1P57086 179 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 ARPC4P59998 168 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 HSPE1P61604 102 aaKnown RBP1.52□□□□□ -2.17
CPNE3-211ENST00000621526 RPS11P62280 158 aaKnown RBP eCLIP1.52□□□□□ -2.17
CPNE3-211ENST00000621526 MS4A2Q01362 244 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 DHODHQ02127 395 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 ST3GAL4Q11206 333 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 SRSF9Q13242 221 aaKnown RBP eCLIP1.52□□□□□ -2.17
CPNE3-211ENST00000621526 GAMTQ14353 236 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 ARL6IP1Q15041 203 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 RAB11BQ15907 218 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 C4orf46Q504U0 113 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 PLAC9Q5JTB6 97 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 DGAT2L7PQ6IED9 249 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 SFXN4Q6P4A7 337 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 WDR73Q6P4I2 378 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 REG3GQ6UW15 175 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 TMPRSS11AQ6ZMR5 421 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 AQP12AQ8IXF9 295 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 HS3ST5Q8IZT8 346 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 PQLC1Q8N2U9 271 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 ZBTB8BQ8NAP8 495 aaPredicted RBP1.52□□□□□ -2.17
CPNE3-211ENST00000621526 OR11H7Q8NGC8 314 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 OR56B1Q8NGI3 324 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 OR6F1Q8NGZ6 308 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 LGALS14Q8TCE9 139 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 TCTEX1D2Q8WW35 142 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 PHYHIPQ92561 330 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 TMEM203Q969S6 136 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 SMIM19Q96E16 107 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 MISP3Q96FF7 219 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 DERL3Q96Q80 235 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 TSC22D3Q99576 134 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 HDHD3Q9BSH5 251 aaPredicted RBP1.52□□□□□ -2.17
CPNE3-211ENST00000621526 PECRQ9BY49 303 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 TMEM140Q9NV12 185 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 COMMD9Q9P000 198 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 DAPK2Q9UIK4 370 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 SPATA2Q9UM82 520 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 OR51B2Q9Y5P1 312 aa1.52□□□□□ -2.17
CPNE3-211ENST00000621526 TRGV2A0A075B6R0 118 aa1.51□□□□□ -2.17
CPNE3-211ENST00000621526 A0A0A6YYD4 124 aa1.51□□□□□ -2.17
CPNE3-211ENST00000621526 TRAV8-1A0A0A6YYK1 113 aa1.51□□□□□ -2.17
CPNE3-211ENST00000621526 SNURFLB1AK76 121 aa1.51□□□□□ -2.17
CPNE3-211ENST00000621526 G3V2T6 193 aa1.51□□□□□ -2.17
CPNE3-211ENST00000621526 J3QRK9 145 aa1.51□□□□□ -2.17
CPNE3-211ENST00000621526 PRAF2O60831 178 aa1.51□□□□□ -2.17
CPNE3-211ENST00000621526 IGHV3-48P01763 117 aa1.51□□□□□ -2.17
CPNE3-211ENST00000621526 ORM1P02763 201 aa1.51□□□□□ -2.17
CPNE3-211ENST00000621526 FCGR3AP08637 254 aa1.51□□□□□ -2.17
CPNE3-211ENST00000621526 LIMS3P0CW19 117 aa1.51□□□□□ -2.17
CPNE3-211ENST00000621526 LIMS4P0CW20 117 aa1.51□□□□□ -2.17
CPNE3-211ENST00000621526 RD3LP0DJH9 198 aa1.51□□□□□ -2.17
CPNE3-211ENST00000621526 GYPEP15421 78 aa1.51□□□□□ -2.17
CPNE3-211ENST00000621526 DTYMKP23919 212 aa1.51□□□□□ -2.17
CPNE3-211ENST00000621526 F2RP25116 425 aa1.51□□□□□ -2.17
CPNE3-211ENST00000621526 MAPK3P27361 379 aaPredicted RBP1.51□□□□□ -2.17
CPNE3-211ENST00000621526 POLR2IP36954 125 aaKnown RBP1.51□□□□□ -2.17
CPNE3-211ENST00000621526 SNCAP37840 140 aa1.51□□□□□ -2.17
CPNE3-211ENST00000621526 CNN1P51911 297 aaKnown RBP1.51□□□□□ -2.17
CPNE3-211ENST00000621526 CRYBA4P53673 196 aa1.51□□□□□ -2.17
CPNE3-211ENST00000621526 LINC01547P58512 204 aaPredicted RBP1.51□□□□□ -2.17
CPNE3-211ENST00000621526 ERVK-16P61578 105 aa1.51□□□□□ -2.17
CPNE3-211ENST00000621526 CATR1Q13166 79 aa1.51□□□□□ -2.17
CPNE3-211ENST00000621526 CIRBPQ14011 172 aaKnown RBP1.51□□□□□ -2.17
CPNE3-211ENST00000621526 WFDC2Q14508 124 aa1.51□□□□□ -2.17
CPNE3-211ENST00000621526 PSG3Q16557 428 aa1.51□□□□□ -2.17
CPNE3-211ENST00000621526 LINC01620Q4KN68 170 aa1.51□□□□□ -2.17
CPNE3-211ENST00000621526 OR2B11Q5JQS5 317 aa1.51□□□□□ -2.17
CPNE3-211ENST00000621526 TOR2AQ5JU69 321 aa1.51□□□□□ -2.17
CPNE3-211ENST00000621526 OR8G2PQ6IF36 304 aa1.51□□□□□ -2.17
CPNE3-211ENST00000621526 CNIH2Q6PI25 160 aa1.51□□□□□ -2.17
CPNE3-211ENST00000621526 SDIM1Q6ZPB5 146 aa1.51□□□□□ -2.17
CPNE3-211ENST00000621526 WFDC10BQ8IUB3 73 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms