RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 SLC25A38Q96DW6 304 aa11.3□□□□□ -0.6
CHMP4A-203ENST00000527154 SSR3Q9UNL2 185 aa11.3□□□□□ -0.6
CHMP4A-203ENST00000527154 IGHV3OR16-12A0A075B7B8 117 aa11.29□□□□□ -0.6
CHMP4A-203ENST00000527154 A8MTW9 85 aa11.29□□□□□ -0.6
CHMP4A-203ENST00000527154 P0C879 139 aa11.29□□□□□ -0.6
CHMP4A-203ENST00000527154 SDC2P34741 201 aa11.29□□□□□ -0.6
CHMP4A-203ENST00000527154 SCAND1P57086 179 aa11.29□□□□□ -0.6
CHMP4A-203ENST00000527154 GABARAPL2P60520 117 aa11.29□□□□□ -0.6
CHMP4A-203ENST00000527154 HERV-K104P61576 105 aa11.29□□□□□ -0.6
CHMP4A-203ENST00000527154 TTC32Q5I0X7 151 aa11.29□□□□□ -0.6
CHMP4A-203ENST00000527154 FOXI2Q6ZQN5 318 aa11.29□□□□□ -0.6
CHMP4A-203ENST00000527154 CMTM1Q8IZ96 169 aa11.29□□□□□ -0.6
CHMP4A-203ENST00000527154 OR5H6Q8NGV6 325 aa11.29□□□□□ -0.6
CHMP4A-203ENST00000527154 OR4A16Q8NH70 328 aa11.29□□□□□ -0.6
CHMP4A-203ENST00000527154 TMEM230Q96A57 120 aa11.29□□□□□ -0.6
CHMP4A-203ENST00000527154 FXYD6Q9H0Q3 95 aa11.29□□□□□ -0.6
CHMP4A-203ENST00000527154 Q9H8V8 135 aa11.29□□□□□ -0.6
CHMP4A-203ENST00000527154 LYRM9A8MSI8 78 aa11.28□□□□□ -0.6
CHMP4A-203ENST00000527154 GPR31O00270 319 aa11.28□□□□□ -0.6
CHMP4A-203ENST00000527154 IGLC1P0CG04 106 aa11.28□□□□□ -0.6
CHMP4A-203ENST00000527154 CBX5P45973 191 aa11.28□□□□□ -0.6
CHMP4A-203ENST00000527154 PAX9P55771 341 aa11.28□□□□□ -0.6
CHMP4A-203ENST00000527154 DEFB1P60022 68 aa11.28□□□□□ -0.6
CHMP4A-203ENST00000527154 MLANAQ16655 118 aa11.28□□□□□ -0.6
CHMP4A-203ENST00000527154 RRN3P1Q2M238 152 aa11.28□□□□□ -0.6
CHMP4A-203ENST00000527154 TIGITQ495A1 244 aa11.28□□□□□ -0.6
CHMP4A-203ENST00000527154 Q6ZRN7 208 aaPredicted RBP11.28□□□□□ -0.6
CHMP4A-203ENST00000527154 TSPAN14Q8NG11 270 aa11.28□□□□□ -0.6
CHMP4A-203ENST00000527154 FRZBQ92765 325 aa11.28□□□□□ -0.6
CHMP4A-203ENST00000527154 UPK3BQ9BT76 320 aa11.28□□□□□ -0.6
CHMP4A-203ENST00000527154 SLC35B3Q9H1N7 401 aa11.28□□□□□ -0.6
CHMP4A-203ENST00000527154 AUNIPQ9H7T9 357 aa11.28□□□□□ -0.6
CHMP4A-203ENST00000527154 GOLT1BQ9Y3E0 138 aa11.28□□□□□ -0.6
CHMP4A-203ENST00000527154 TRAV30A0A087WSZ9 112 aa11.27□□□□□ -0.61
CHMP4A-203ENST00000527154 SOCS3O14543 225 aa11.27□□□□□ -0.61
CHMP4A-203ENST00000527154 CLEC2LP0C7M8 214 aa11.27□□□□□ -0.61
CHMP4A-203ENST00000527154 SNCAP37840 140 aa11.27□□□□□ -0.61
CHMP4A-203ENST00000527154 FXYD7P58549 80 aa11.27□□□□□ -0.61
CHMP4A-203ENST00000527154 YPEL3P61236 119 aaPredicted RBP11.27□□□□□ -0.61
CHMP4A-203ENST00000527154 USF2Q15853 346 aaPredicted RBP11.27□□□□□ -0.61
CHMP4A-203ENST00000527154 IDNKQ5T6J7 187 aa11.27□□□□□ -0.61
CHMP4A-203ENST00000527154 SPATA31B1PQ5VZV4 182 aa11.27□□□□□ -0.61
CHMP4A-203ENST00000527154 SIGLEC15Q6ZMC9 328 aa11.27□□□□□ -0.61
CHMP4A-203ENST00000527154 H2BFWTQ7Z2G1 175 aa11.27□□□□□ -0.61
CHMP4A-203ENST00000527154 SPARTQ8N0X7 666 aa11.27□□□□□ -0.61
CHMP4A-203ENST00000527154 FCGR1BQ92637 280 aa11.27□□□□□ -0.61
CHMP4A-203ENST00000527154 ZNF2Q9BSG1 426 aaPredicted RBP11.27□□□□□ -0.61
CHMP4A-203ENST00000527154 DIABLOQ9NR28 239 aa11.27□□□□□ -0.61
CHMP4A-203ENST00000527154 PGPEP1Q9NXJ5 209 aa11.27□□□□□ -0.61
CHMP4A-203ENST00000527154 PLAC8L1A1L4L8 177 aa11.26□□□□□ -0.61
CHMP4A-203ENST00000527154 MEIS3P1A6NDR6 274 aa11.26□□□□□ -0.61
CHMP4A-203ENST00000527154 SCGB2A1O75556 95 aa11.26□□□□□ -0.61
CHMP4A-203ENST00000527154 RFX2P48378 723 aa11.26□□□□□ -0.61
CHMP4A-203ENST00000527154 CDPF1Q6NVV7 123 aa11.26□□□□□ -0.61
CHMP4A-203ENST00000527154 SSX7Q7RTT5 188 aa11.26□□□□□ -0.61
CHMP4A-203ENST00000527154 SCPEP1Q9HB40 452 aa11.26□□□□□ -0.61
CHMP4A-203ENST00000527154 EHFQ9NZC4 300 aa11.26□□□□□ -0.61
CHMP4A-203ENST00000527154 A0A0B4J293 547 aa11.25□□□□□ -0.61
CHMP4A-203ENST00000527154 NAT1P18440 290 aa11.25□□□□□ -0.61
CHMP4A-203ENST00000527154 TSPOP30536 169 aa11.25□□□□□ -0.61
CHMP4A-203ENST00000527154 RNF141Q8WVD5 230 aa11.25□□□□□ -0.61
CHMP4A-203ENST00000527154 MRGPRFQ96AM1 343 aa11.25□□□□□ -0.61
CHMP4A-203ENST00000527154 IFT46Q9NQC8 304 aa11.25□□□□□ -0.61
CHMP4A-203ENST00000527154 DNAH8Q96JB1 4490 aa11.25□□□□□ -0.61
CHMP4A-203ENST00000527154 LOC100506127A0A0U1RQW1 187 aa11.24□□□□□ -0.61
CHMP4A-203ENST00000527154 RPS10-NUDT3A0A1W2PQS6 291 aa11.24□□□□□ -0.61
CHMP4A-203ENST00000527154 NUDT3O95989 172 aa11.24□□□□□ -0.61
CHMP4A-203ENST00000527154 IGKV3-20P01619 116 aa11.24□□□□□ -0.61
CHMP4A-203ENST00000527154 OPRK1P41145 380 aa11.24□□□□□ -0.61
CHMP4A-203ENST00000527154 SUB1P53999 127 aaKnown RBP eCLIP11.24□□□□□ -0.61
CHMP4A-203ENST00000527154 PSG9Q00887 426 aa11.24□□□□□ -0.61
CHMP4A-203ENST00000527154 DHODHQ02127 395 aa11.24□□□□□ -0.61
CHMP4A-203ENST00000527154 SPINK9Q5DT21 86 aa11.24□□□□□ -0.61
CHMP4A-203ENST00000527154 AMTNQ6UX39 209 aa11.24□□□□□ -0.61
CHMP4A-203ENST00000527154 OR1S2Q8NGQ3 325 aa11.24□□□□□ -0.61
CHMP4A-203ENST00000527154 Q8WTZ3 238 aa11.24□□□□□ -0.61
CHMP4A-203ENST00000527154 WDR12Q9GZL7 423 aaKnown RBP11.24□□□□□ -0.61
CHMP4A-203ENST00000527154 GSTZ1O43708 216 aaPredicted RBP11.23□□□□□ -0.61
CHMP4A-203ENST00000527154 PSMB3P49720 205 aa11.23□□□□□ -0.61
CHMP4A-203ENST00000527154 IZUMO4Q1ZYL8 232 aa11.23□□□□□ -0.61
CHMP4A-203ENST00000527154 PRSS54Q6PEW0 395 aa11.23□□□□□ -0.61
CHMP4A-203ENST00000527154 OR6F1Q8NGZ6 308 aa11.23□□□□□ -0.61
CHMP4A-203ENST00000527154 IGF2BP2-AS1Q96M15 143 aa11.23□□□□□ -0.61
CHMP4A-203ENST00000527154 A0A0J9YX75 114 aa11.22□□□□□ -0.61
CHMP4A-203ENST00000527154 F5H768 121 aa11.22□□□□□ -0.61
CHMP4A-203ENST00000527154 IGKV1-5P01602 117 aa11.22□□□□□ -0.61
CHMP4A-203ENST00000527154 PMP2P02689 132 aa11.22□□□□□ -0.61
CHMP4A-203ENST00000527154 AARDQ4LEZ3 155 aa11.22□□□□□ -0.61
CHMP4A-203ENST00000527154 TBC1D26Q86UD7 250 aa11.22□□□□□ -0.61
CHMP4A-203ENST00000527154 ZNF503Q96F45 646 aa11.22□□□□□ -0.61
CHMP4A-203ENST00000527154 CBY3A6NI87 242 aa11.21□□□□□ -0.61
CHMP4A-203ENST00000527154 IL4P05112 153 aa11.21□□□□□ -0.61
CHMP4A-203ENST00000527154 ATP5G1P05496 136 aa11.21□□□□□ -0.61
CHMP4A-203ENST00000527154 ATP5G3P48201 142 aa11.21□□□□□ -0.61
CHMP4A-203ENST00000527154 RORCP51449 518 aa11.21□□□□□ -0.61
CHMP4A-203ENST00000527154 PHLDA2Q53GA4 152 aa11.21□□□□□ -0.61
CHMP4A-203ENST00000527154 FAM78BQ5VT40 261 aa11.21□□□□□ -0.61
CHMP4A-203ENST00000527154 SLC35G3Q8N808 338 aa11.21□□□□□ -0.61
CHMP4A-203ENST00000527154 OR5H2Q8NGV7 314 aa11.21□□□□□ -0.61
CHMP4A-203ENST00000527154 C17orf77Q96MU5 243 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms