RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, human

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC66-222	ENST00000494672	WRAP73	Q9P2S5	460 aa	Predicted RBP	3.57	□□□□□ -1.84
CCDC66-222	ENST00000494672	MTFP1	Q9UDX5	166 aa		3.57	□□□□□ -1.84
CCDC66-222	ENST00000494672	RARRES3	Q9UL19	164 aa		3.57	□□□□□ -1.84
CCDC66-222	ENST00000494672	ZNF257	Q9Y2Q1	563 aa		3.57	□□□□□ -1.84
CCDC66-222	ENST00000494672	COQ4	Q9Y3A0	265 aa		3.57	□□□□□ -1.84
CCDC66-222	ENST00000494672	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	3.57	□□□□□ -1.84
CCDC66-222	ENST00000494672	HCFC1	P51610	2035 aa		3.56	□□□□□ -1.84
CCDC66-222	ENST00000494672	SCN10A	Q9Y5Y9	1956 aa		3.56	□□□□□ -1.84
CCDC66-222	ENST00000494672	ATAD5	Q96QE3	1844 aa		3.56	□□□□□ -1.84
CCDC66-222	ENST00000494672	RGPD3	A6NKT7	1758 aa	Predicted RBP	3.56	□□□□□ -1.84
CCDC66-222	ENST00000494672	MON2	Q7Z3U7	1717 aa		3.56	□□□□□ -1.84
CCDC66-222	ENST00000494672		A0A1W2PPM0	123 aa		3.56	□□□□□ -1.84
CCDC66-222	ENST00000494672	TLCD2	A6NGC4	264 aa		3.56	□□□□□ -1.84
CCDC66-222	ENST00000494672	NCBP2L	A6PVI3	153 aa	Known RBP	3.56	□□□□□ -1.84
CCDC66-222	ENST00000494672	C17orf112	F2Z3M2	114 aa		3.56	□□□□□ -1.84
CCDC66-222	ENST00000494672		K7EMT4	169 aa		3.56	□□□□□ -1.84
CCDC66-222	ENST00000494672	SOCS1	O15524	211 aa		3.56	□□□□□ -1.84
CCDC66-222	ENST00000494672	ANGPTL7	O43827	346 aa		3.56	□□□□□ -1.84
CCDC66-222	ENST00000494672	ARL6IP5	O75915	188 aa		3.56	□□□□□ -1.84
CCDC66-222	ENST00000494672	SNCG	O76070	127 aa		3.56	□□□□□ -1.84
CCDC66-222	ENST00000494672	DUSP14	O95147	198 aa	Known RBP	3.56	□□□□□ -1.84
CCDC66-222	ENST00000494672	SLC25A5	P05141	298 aa	Known RBP	3.56	□□□□□ -1.84
CCDC66-222	ENST00000494672	EIF4E	P06730	217 aa	Known RBP	3.56	□□□□□ -1.84
CCDC66-222	ENST00000494672	CD59	P13987	128 aa		3.56	□□□□□ -1.84
CCDC66-222	ENST00000494672	PRSS3	P35030	304 aa		3.56	□□□□□ -1.84
CCDC66-222	ENST00000494672	FOXA3	P55318	350 aa	Predicted RBP	3.56	□□□□□ -1.84
CCDC66-222	ENST00000494672	H2BFS	P57053	126 aa		3.56	□□□□□ -1.84
CCDC66-222	ENST00000494672	PRDX1	Q06830	199 aa	Known RBP	3.56	□□□□□ -1.84
CCDC66-222	ENST00000494672	RRN3P1	Q2M238	152 aa		3.56	□□□□□ -1.84
CCDC66-222	ENST00000494672	MPV17L2	Q567V2	206 aa		3.56	□□□□□ -1.84
CCDC66-222	ENST00000494672	FHL5	Q5TD97	284 aa		3.56	□□□□□ -1.84
CCDC66-222	ENST00000494672	TMEM91	Q6ZNR0	172 aa		3.56	□□□□□ -1.84
CCDC66-222	ENST00000494672	LHFPL1	Q86WI0	220 aa		3.56	□□□□□ -1.84
CCDC66-222	ENST00000494672	TOMM5	Q8N4H5	51 aa		3.56	□□□□□ -1.84
CCDC66-222	ENST00000494672	LINC00612	Q8N6U2	182 aa		3.56	□□□□□ -1.84
CCDC66-222	ENST00000494672	SGMS2	Q8NHU3	365 aa		3.56	□□□□□ -1.84
CCDC66-222	ENST00000494672	PHLDA1	Q8WV24	401 aa	Predicted RBP	3.56	□□□□□ -1.84
CCDC66-222	ENST00000494672	DLX4	Q92988	240 aa	Predicted RBP	3.56	□□□□□ -1.84
CCDC66-222	ENST00000494672	DPH3	Q96FX2	82 aa		3.56	□□□□□ -1.84
CCDC66-222	ENST00000494672	NAA60	Q9H7X0	242 aa		3.56	□□□□□ -1.84
CCDC66-222	ENST00000494672	PDF	Q9HBH1	243 aa		3.56	□□□□□ -1.84
CCDC66-222	ENST00000494672	C21orf62	Q9NYP8	219 aa		3.56	□□□□□ -1.84
CCDC66-222	ENST00000494672	IL36A	Q9UHA7	158 aa		3.56	□□□□□ -1.84
CCDC66-222	ENST00000494672	NOTCH2	Q04721	2471 aa		3.56	□□□□□ -1.84
CCDC66-222	ENST00000494672	SCN8A	Q9UQD0	1980 aa		3.56	□□□□□ -1.84
CCDC66-222	ENST00000494672	PARP4	Q9UKK3	1724 aa	Known RBP	3.56	□□□□□ -1.84
CCDC66-222	ENST00000494672	SHPRH	Q149N8	1683 aa		3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	ALPK3	Q96L96	1907 aa		3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	IGHV3OR16-10	A0A075B7F0	116 aa		3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	TRAV9-2	A0A087WT02	112 aa		3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	CCL15-CCL14	A0A0B4J2E2	113 aa		3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	MUC21	A0A0G2JKD1	596 aa		3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	MUC21	A0A140T8X8	626 aa		3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	C3orf85	A0A1B0GTC6	90 aa		3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672		A0A1W2PNU3	283 aa	Predicted RBP	3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	KNCN	A6PVL3	124 aa		3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	C2CD4D	B7Z1M9	353 aa		3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	GABARAP	H6UMI1	98 aa		3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672		M0R2P5	195 aa		3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	FGF1	P05230	155 aa		3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	OR9G9	P0C7N8	305 aa		3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	IGHV4-31	P0DP07	118 aa		3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	COX5A	P20674	150 aa		3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	CRYGS	P22914	178 aa		3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	FKBP2	P26885	142 aa	Known RBP	3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	PSMB3	P49720	205 aa		3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	SUB1	P53999	127 aa	Known RBP eCLIP	3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	B3GALT5-AS1	P59052	145 aa		3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	C1QTNF8	P60827	252 aa		3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	CYCS	P99999	105 aa	Known RBP	3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	ZNF85	Q03923	595 aa		3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	LAGE3	Q14657	143 aa		3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	ZNF506	Q5JVG8	444 aa		3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	MUC21	Q5SSG8	566 aa		3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	SLC25A30	Q5SVS4	291 aa		3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	ACP7	Q6ZNF0	438 aa		3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672		Q6ZRP5	223 aa		3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672		Q6ZRU5	148 aa		3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	ZNF571	Q7Z3V5	609 aa	Predicted RBP	3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	TMEM150A	Q86TG1	271 aa		3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	SLC25A42	Q86VD7	318 aa		3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	RPS19BP1	Q86WX3	136 aa	Known RBP	3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	ZCCHC24	Q8N2G6	241 aa	Known RBP	3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	NT5C	Q8TCD5	201 aa		3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	BORCS8	Q96FH0	119 aa		3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	C2orf48	Q96LS8	159 aa		3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	GNB1L	Q9BYB4	327 aa		3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	PLXNA4	Q9HCM2	1894 aa		3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	ARID2	Q68CP9	1835 aa		3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	ARFGEF2	Q9Y6D5	1785 aa		3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	PEAK1	Q9H792	1746 aa		3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	C5	P01031	1676 aa		3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	KDM6B	O15054	1643 aa		3.55	□□□□□ -1.84
CCDC66-222	ENST00000494672	MEGF6	O75095	1541 aa		3.54	□□□□□ -1.84
CCDC66-222	ENST00000494672	DOCK6	Q96HP0	2047 aa		3.54	□□□□□ -1.84
CCDC66-222	ENST00000494672	BRCA1	P38398	1863 aa	Known RBP	3.54	□□□□□ -1.84
CCDC66-222	ENST00000494672	PATJ	Q8NI35	1801 aa		3.54	□□□□□ -1.84
CCDC66-222	ENST00000494672	RGPD2	P0DJD1	1756 aa		3.54	□□□□□ -1.84
CCDC66-222	ENST00000494672	TRBV20-1	A0A075B6N2	111 aa		3.54	□□□□□ -1.84
CCDC66-222	ENST00000494672	TRAV4	A0A0B4J268	109 aa		3.54	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms