RNA–Protein interactions for RNA: ENST00000475378.5

RNF220-212, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-212ENST00000475378 SCGB2A1O75556 95 aa12.56□□□□□ -0.4
RNF220-212ENST00000475378 CLEC2LP0C7M8 214 aa12.56□□□□□ -0.4
RNF220-212ENST00000475378 P0C879 139 aa12.56□□□□□ -0.4
RNF220-212ENST00000475378 IGLC1P0CG04 106 aa12.56□□□□□ -0.4
RNF220-212ENST00000475378 NAT1P18440 290 aa12.56□□□□□ -0.4
RNF220-212ENST00000475378 HOXA1P49639 335 aaPredicted RBP12.56□□□□□ -0.4
RNF220-212ENST00000475378 SUB1P53999 127 aaKnown RBP eCLIP12.56□□□□□ -0.4
RNF220-212ENST00000475378 USF2Q15853 346 aaPredicted RBP12.56□□□□□ -0.4
RNF220-212ENST00000475378 GSG1LQ6UXU4 331 aa12.56□□□□□ -0.4
RNF220-212ENST00000475378 SIGLEC15Q6ZMC9 328 aa12.56□□□□□ -0.4
RNF220-212ENST00000475378 SLC35G3Q8N808 338 aa12.56□□□□□ -0.4
RNF220-212ENST00000475378 SAV1Q9H4B6 383 aaPredicted RBP12.56□□□□□ -0.4
RNF220-212ENST00000475378 A0A0B4J293 547 aa12.55□□□□□ -0.4
RNF220-212ENST00000475378 BUB3O43684 328 aa12.55□□□□□ -0.4
RNF220-212ENST00000475378 HBE1P02100 147 aa12.55□□□□□ -0.4
RNF220-212ENST00000475378 SDC2P34741 201 aa12.55□□□□□ -0.4
RNF220-212ENST00000475378 ALDH3B2P48448 385 aa12.55□□□□□ -0.4
RNF220-212ENST00000475378 BSXQ3C1V8 233 aa12.55□□□□□ -0.4
RNF220-212ENST00000475378 OR5H2Q8NGV7 314 aa12.55□□□□□ -0.4
RNF220-212ENST00000475378 OR6F1Q8NGZ6 308 aa12.55□□□□□ -0.4
RNF220-212ENST00000475378 SLC35B3Q9H1N7 401 aa12.55□□□□□ -0.4
RNF220-212ENST00000475378 LINC00588Q9Y4M8 146 aa12.55□□□□□ -0.4
RNF220-212ENST00000475378 IGKV1-5P01602 117 aa12.54□□□□□ -0.4
RNF220-212ENST00000475378 TAS2R46P59540 309 aa12.54□□□□□ -0.4
RNF220-212ENST00000475378 YPEL3P61236 119 aaPredicted RBP12.54□□□□□ -0.4
RNF220-212ENST00000475378 IDNKQ5T6J7 187 aa12.54□□□□□ -0.4
RNF220-212ENST00000475378 FOXI2Q6ZQN5 318 aa12.54□□□□□ -0.4
RNF220-212ENST00000475378 OR1S2Q8NGQ3 325 aa12.54□□□□□ -0.4
RNF220-212ENST00000475378 Q8WTZ3 238 aa12.54□□□□□ -0.4
RNF220-212ENST00000475378 GOLT1BQ9Y3E0 138 aa12.54□□□□□ -0.4
RNF220-212ENST00000475378 BTF3P20290 206 aaKnown RBP12.53□□□□□ -0.4
RNF220-212ENST00000475378 S100GP29377 79 aa12.53□□□□□ -0.4
RNF220-212ENST00000475378 DHODHQ02127 395 aa12.53□□□□□ -0.4
RNF220-212ENST00000475378 MXD1Q05195 221 aa12.53□□□□□ -0.4
RNF220-212ENST00000475378 ZNF79Q15937 498 aa12.53□□□□□ -0.4
RNF220-212ENST00000475378 RRN3P1Q2M238 152 aa12.53□□□□□ -0.4
RNF220-212ENST00000475378 KRTAP1-5Q9BYS1 174 aa12.53□□□□□ -0.4
RNF220-212ENST00000475378 HRH1P35367 487 aa12.52□□□□□ -0.41
RNF220-212ENST00000475378 ETV6P41212 452 aa12.52□□□□□ -0.41
RNF220-212ENST00000475378 TAS2R20P59543 309 aa12.52□□□□□ -0.41
RNF220-212ENST00000475378 LPCAT3Q6P1A2 487 aa12.52□□□□□ -0.41
RNF220-212ENST00000475378 PRSS54Q6PEW0 395 aa12.52□□□□□ -0.41
RNF220-212ENST00000475378 LYSMD2Q8IV50 215 aa12.52□□□□□ -0.41
RNF220-212ENST00000475378 NRG4Q8WWG1 115 aa12.52□□□□□ -0.41
RNF220-212ENST00000475378 WDR12Q9GZL7 423 aaKnown RBP12.52□□□□□ -0.41
RNF220-212ENST00000475378 RPS10-NUDT3A0A1W2PQS6 291 aa12.51□□□□□ -0.41
RNF220-212ENST00000475378 NUDT3O95989 172 aa12.51□□□□□ -0.41
RNF220-212ENST00000475378 IL4P05112 153 aa12.51□□□□□ -0.41
RNF220-212ENST00000475378 CCL18P55774 89 aa12.51□□□□□ -0.41
RNF220-212ENST00000475378 OR4B1Q8NGF8 309 aa12.51□□□□□ -0.41
RNF220-212ENST00000475378 C7orf50Q9BRJ6 194 aaKnown RBP12.51□□□□□ -0.41
RNF220-212ENST00000475378 SSR3Q9UNL2 185 aa12.51□□□□□ -0.41
RNF220-212ENST00000475378 EBAG9O00559 213 aa12.5□□□□□ -0.41
RNF220-212ENST00000475378 SOCS3O14543 225 aa12.5□□□□□ -0.41
RNF220-212ENST00000475378 GSTZ1O43708 216 aaPredicted RBP12.5□□□□□ -0.41
RNF220-212ENST00000475378 OR10J1P30954 320 aa12.5□□□□□ -0.41
RNF220-212ENST00000475378 RND2P52198 227 aa12.5□□□□□ -0.41
RNF220-212ENST00000475378 PAX9P55771 341 aa12.5□□□□□ -0.41
RNF220-212ENST00000475378 UCP3P55916 312 aa12.5□□□□□ -0.41
RNF220-212ENST00000475378 PSG9Q00887 426 aa12.5□□□□□ -0.41
RNF220-212ENST00000475378 LYPD1Q8N2G4 141 aa12.5□□□□□ -0.41
RNF220-212ENST00000475378 SCPEP1Q9HB40 452 aa12.5□□□□□ -0.41
RNF220-212ENST00000475378 BLOC1S6Q9UL45 172 aa12.5□□□□□ -0.41
RNF220-212ENST00000475378 LYRM9A8MSI8 78 aa12.49□□□□□ -0.41
RNF220-212ENST00000475378 HSPA13P48723 471 aa12.49□□□□□ -0.41
RNF220-212ENST00000475378 RORCP51449 518 aa12.49□□□□□ -0.41
RNF220-212ENST00000475378 LINC00052Q96N35 136 aa12.49□□□□□ -0.41
RNF220-212ENST00000475378 PDCD10Q9BUL8 212 aa12.49□□□□□ -0.41
RNF220-212ENST00000475378 Q9H8V8 135 aa12.49□□□□□ -0.41
RNF220-212ENST00000475378 NXPH3O95157 252 aa12.48□□□□□ -0.41
RNF220-212ENST00000475378 PSMB9P28065 219 aa12.48□□□□□ -0.41
RNF220-212ENST00000475378 HLA-DMAP28067 261 aa12.48□□□□□ -0.41
RNF220-212ENST00000475378 PSMB3P49720 205 aa12.48□□□□□ -0.41
RNF220-212ENST00000475378 XGP55808 180 aa12.48□□□□□ -0.41
RNF220-212ENST00000475378 Q5VSD8 79 aa12.48□□□□□ -0.41
RNF220-212ENST00000475378 FAM78BQ5VT40 261 aa12.48□□□□□ -0.41
RNF220-212ENST00000475378 SPATA31B1PQ5VZV4 182 aa12.48□□□□□ -0.41
RNF220-212ENST00000475378 MAGT1Q9H0U3 335 aa12.48□□□□□ -0.41
RNF220-212ENST00000475378 ENY2Q9NPA8 101 aa12.48□□□□□ -0.41
RNF220-212ENST00000475378 SRRM2Q9UQ35 2752 aaKnown RBP12.48□□□□□ -0.41
RNF220-212ENST00000475378 A0A0G2JRQ6 117 aa12.47□□□□□ -0.41
RNF220-212ENST00000475378 F5H768 121 aa12.47□□□□□ -0.41
RNF220-212ENST00000475378 F6UB75 175 aa12.47□□□□□ -0.41
RNF220-212ENST00000475378 TOMM40O96008 361 aa12.47□□□□□ -0.41
RNF220-212ENST00000475378 PRM2P04554 102 aa12.47□□□□□ -0.41
RNF220-212ENST00000475378 SLC25A4P12235 298 aa12.47□□□□□ -0.41
RNF220-212ENST00000475378 AKR1C2P52895 323 aa12.47□□□□□ -0.41
RNF220-212ENST00000475378 TSPAN5P62079 268 aa12.47□□□□□ -0.41
RNF220-212ENST00000475378 SSX7Q7RTT5 188 aa12.47□□□□□ -0.41
RNF220-212ENST00000475378 RNF141Q8WVD5 230 aa12.47□□□□□ -0.41
RNF220-212ENST00000475378 TP53RKQ96S44 253 aa12.47□□□□□ -0.41
RNF220-212ENST00000475378 Q9H3A6 140 aa12.47□□□□□ -0.41
RNF220-212ENST00000475378 KLK11Q9UBX7 282 aa12.47□□□□□ -0.41
RNF220-212ENST00000475378 A0A0J9YX75 114 aa12.46□□□□□ -0.41
RNF220-212ENST00000475378 A8MTW9 85 aa12.46□□□□□ -0.41
RNF220-212ENST00000475378 ID1P41134 155 aa12.46□□□□□ -0.41
RNF220-212ENST00000475378 HTR2BP41595 481 aa12.46□□□□□ -0.41
RNF220-212ENST00000475378 RND3P61587 244 aa12.46□□□□□ -0.41
RNF220-212ENST00000475378 TTC32Q5I0X7 151 aa12.46□□□□□ -0.41
RNF220-212ENST00000475378 S100A16Q96FQ6 103 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms