RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 C16orf54Q6UWD8 224 aa6.43□□□□□ -1.38
CCDC171-204ENST00000470191 TBC1D26Q86UD7 250 aa6.43□□□□□ -1.38
CCDC171-204ENST00000470191 GLMPQ8WWB7 406 aa6.43□□□□□ -1.38
CCDC171-204ENST00000470191 LINC00052Q96N35 136 aa6.43□□□□□ -1.38
CCDC171-204ENST00000470191 NEU1Q99519 415 aa6.43□□□□□ -1.38
CCDC171-204ENST00000470191 SLC35B3Q9H1N7 401 aa6.43□□□□□ -1.38
CCDC171-204ENST00000470191 FNDC4Q9H6D8 234 aaPredicted RBP6.43□□□□□ -1.38
CCDC171-204ENST00000470191 TXNL4BQ9NX01 149 aaKnown RBP6.43□□□□□ -1.38
CCDC171-204ENST00000470191 HLA-DRB4X5D2U9 266 aa6.43□□□□□ -1.38
CCDC171-204ENST00000470191 TEX48A0A1B0GUV7 120 aa6.42□□□□□ -1.38
CCDC171-204ENST00000470191 HBE1P02100 147 aa6.42□□□□□ -1.38
CCDC171-204ENST00000470191 RNASE2P10153 161 aaKnown RBP6.42□□□□□ -1.38
CCDC171-204ENST00000470191 FUSP35637 526 aaKnown RBP eCLIP6.42□□□□□ -1.38
CCDC171-204ENST00000470191 ETV6P41212 452 aa6.42□□□□□ -1.38
CCDC171-204ENST00000470191 CBX5P45973 191 aa6.42□□□□□ -1.38
CCDC171-204ENST00000470191 HOXA1P49639 335 aaPredicted RBP6.42□□□□□ -1.38
CCDC171-204ENST00000470191 TBCEQ15813 527 aaPredicted RBP6.42□□□□□ -1.38
CCDC171-204ENST00000470191 KCTD21Q4G0X4 260 aa6.42□□□□□ -1.38
CCDC171-204ENST00000470191 C15orf53Q8NAA6 179 aa6.42□□□□□ -1.38
CCDC171-204ENST00000470191 OR5H2Q8NGV7 314 aa6.42□□□□□ -1.38
CCDC171-204ENST00000470191 ZNRF2Q8NHG8 242 aa6.42□□□□□ -1.38
CCDC171-204ENST00000470191 NRN1Q9NPD7 142 aa6.42□□□□□ -1.38
CCDC171-204ENST00000470191 DIABLOQ9NR28 239 aa6.42□□□□□ -1.38
CCDC171-204ENST00000470191 LRP1BQ9NZR2 4599 aa6.41□□□□□ -1.38
CCDC171-204ENST00000470191 F5H768 121 aa6.41□□□□□ -1.38
CCDC171-204ENST00000470191 SCGB2A1O75556 95 aa6.41□□□□□ -1.38
CCDC171-204ENST00000470191 IGKV1-17P01599 117 aa6.41□□□□□ -1.38
CCDC171-204ENST00000470191 PRM2P04554 102 aa6.41□□□□□ -1.38
CCDC171-204ENST00000470191 DEFB130BP0DP73 79 aa6.41□□□□□ -1.38
CCDC171-204ENST00000470191 DEFB130AP0DP74 79 aa6.41□□□□□ -1.38
CCDC171-204ENST00000470191 S100GP29377 79 aa6.41□□□□□ -1.38
CCDC171-204ENST00000470191 SDC2P34741 201 aa6.41□□□□□ -1.38
CCDC171-204ENST00000470191 AP2S1P53680 142 aaPredicted RBP6.41□□□□□ -1.38
CCDC171-204ENST00000470191 SUB1P53999 127 aaKnown RBP eCLIP6.41□□□□□ -1.38
CCDC171-204ENST00000470191 FAM3BP58499 235 aaPredicted RBP6.41□□□□□ -1.38
CCDC171-204ENST00000470191 DHODHQ02127 395 aa6.41□□□□□ -1.38
CCDC171-204ENST00000470191 RRN3P1Q2M238 152 aa6.41□□□□□ -1.38
CCDC171-204ENST00000470191 DHRS11Q6UWP2 260 aa6.41□□□□□ -1.38
CCDC171-204ENST00000470191 SIGLEC15Q6ZMC9 328 aa6.41□□□□□ -1.38
CCDC171-204ENST00000470191 CADM3Q8N126 398 aa6.41□□□□□ -1.38
CCDC171-204ENST00000470191 OR6F1Q8NGZ6 308 aa6.41□□□□□ -1.38
CCDC171-204ENST00000470191 Q8WTZ3 238 aa6.41□□□□□ -1.38
CCDC171-204ENST00000470191 MAGT1Q9H0U3 335 aa6.41□□□□□ -1.38
CCDC171-204ENST00000470191 ENY2Q9NPA8 101 aa6.41□□□□□ -1.38
CCDC171-204ENST00000470191 GOLT1BQ9Y3E0 138 aa6.41□□□□□ -1.38
CCDC171-204ENST00000470191 APOBP04114 4563 aaKnown RBP6.41□□□□□ -1.38
CCDC171-204ENST00000470191 F6UB75 175 aa6.4□□□□□ -1.38
CCDC171-204ENST00000470191 M0QYG6 137 aa6.4□□□□□ -1.38
CCDC171-204ENST00000470191 CORTO00230 105 aa6.4□□□□□ -1.38
CCDC171-204ENST00000470191 IL4P05112 153 aa6.4□□□□□ -1.38
CCDC171-204ENST00000470191 PSMB9P28065 219 aa6.4□□□□□ -1.38
CCDC171-204ENST00000470191 HLA-DMAP28067 261 aa6.4□□□□□ -1.38
CCDC171-204ENST00000470191 RND2P52198 227 aa6.4□□□□□ -1.38
CCDC171-204ENST00000470191 TSPAN5P62079 268 aa6.4□□□□□ -1.38
CCDC171-204ENST00000470191 OXA1LQ15070 435 aa6.4□□□□□ -1.38
CCDC171-204ENST00000470191 USF2Q15853 346 aaPredicted RBP6.4□□□□□ -1.38
CCDC171-204ENST00000470191 C1orf158Q8N1D5 194 aa6.4□□□□□ -1.38
CCDC171-204ENST00000470191 ZNF709Q8N972 641 aa6.4□□□□□ -1.38
CCDC171-204ENST00000470191 OR4X1Q8NH49 305 aa6.4□□□□□ -1.38
CCDC171-204ENST00000470191 TMEM208Q9BTX3 173 aa6.4□□□□□ -1.38
CCDC171-204ENST00000470191 PDCD10Q9BUL8 212 aa6.4□□□□□ -1.38
CCDC171-204ENST00000470191 SSR3Q9UNL2 185 aa6.4□□□□□ -1.38
CCDC171-204ENST00000470191 LINC00588Q9Y4M8 146 aa6.4□□□□□ -1.38
CCDC171-204ENST00000470191 U3KQE9 123 aa6.4□□□□□ -1.38
CCDC171-204ENST00000470191 TRAV30A0A087WSZ9 112 aa6.39□□□□□ -1.39
CCDC171-204ENST00000470191 ZNF705GA8MUZ8 300 aaPredicted RBP6.39□□□□□ -1.39
CCDC171-204ENST00000470191 IGKV1-5P01602 117 aa6.39□□□□□ -1.39
CCDC171-204ENST00000470191 OR10J1P30954 320 aa6.39□□□□□ -1.39
CCDC171-204ENST00000470191 HRH1P35367 487 aa6.39□□□□□ -1.39
CCDC171-204ENST00000470191 NKX2-1P43699 371 aaPredicted RBP6.39□□□□□ -1.39
CCDC171-204ENST00000470191 RORCP51449 518 aa6.39□□□□□ -1.39
CCDC171-204ENST00000470191 AKR1C2P52895 323 aa6.39□□□□□ -1.39
CCDC171-204ENST00000470191 CCL18P55774 89 aa6.39□□□□□ -1.39
CCDC171-204ENST00000470191 TAS2R46P59540 309 aa6.39□□□□□ -1.39
CCDC171-204ENST00000470191 TAS2R20P59543 309 aa6.39□□□□□ -1.39
CCDC171-204ENST00000470191 CLINT1Q14677 625 aa6.39□□□□□ -1.39
CCDC171-204ENST00000470191 FCN2Q15485 313 aa6.39□□□□□ -1.39
CCDC171-204ENST00000470191 FAM78BQ5VT40 261 aa6.39□□□□□ -1.39
CCDC171-204ENST00000470191 COQ8AQ8NI60 647 aa6.39□□□□□ -1.39
CCDC171-204ENST00000470191 CNBD2Q96M20 576 aa6.39□□□□□ -1.39
CCDC171-204ENST00000470191 UHRF2Q96PU4 802 aa6.39□□□□□ -1.39
CCDC171-204ENST00000470191 PBDC1Q9BVG4 233 aa6.39□□□□□ -1.39
CCDC171-204ENST00000470191 WDR12Q9GZL7 423 aaKnown RBP6.39□□□□□ -1.39
CCDC171-204ENST00000470191 SAV1Q9H4B6 383 aaPredicted RBP6.39□□□□□ -1.39
CCDC171-204ENST00000470191 A0A0A6YYH2 397 aa6.38□□□□□ -1.39
CCDC171-204ENST00000470191 A0A0B4J293 547 aa6.38□□□□□ -1.39
CCDC171-204ENST00000470191 LOC100506127A0A0U1RQW1 187 aa6.38□□□□□ -1.39
CCDC171-204ENST00000470191 A6NJ64 397 aa6.38□□□□□ -1.39
CCDC171-204ENST00000470191 EBAG9O00559 213 aa6.38□□□□□ -1.39
CCDC171-204ENST00000470191 IGLC1P0CG04 106 aa6.38□□□□□ -1.39
CCDC171-204ENST00000470191 PGAM2P15259 253 aa6.38□□□□□ -1.39
CCDC171-204ENST00000470191 PI3P19957 117 aa6.38□□□□□ -1.39
CCDC171-204ENST00000470191 PSG9Q00887 426 aa6.38□□□□□ -1.39
CCDC171-204ENST00000470191 Q5VSD8 79 aa6.38□□□□□ -1.39
CCDC171-204ENST00000470191 SSX7Q7RTT5 188 aa6.38□□□□□ -1.39
CCDC171-204ENST00000470191 OR51G1Q8NGK1 321 aa6.38□□□□□ -1.39
CCDC171-204ENST00000470191 OR1S2Q8NGQ3 325 aa6.38□□□□□ -1.39
CCDC171-204ENST00000470191 RNASE11Q8TAA1 199 aaKnown RBP6.38□□□□□ -1.39
CCDC171-204ENST00000470191 ACY3Q96HD9 319 aa6.38□□□□□ -1.39
CCDC171-204ENST00000470191 KRTAP4-9Q9BYQ8 210 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms