RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 OR4E1P0C645 316 aa0.83□□□□□ -2.28
LRCH3-211ENST00000466054 MGST1P10620 155 aaKnown RBP0.83□□□□□ -2.28
LRCH3-211ENST00000466054 CASP1P29466 404 aa0.83□□□□□ -2.28
LRCH3-211ENST00000466054 DEFA1P59665 94 aa0.83□□□□□ -2.28
LRCH3-211ENST00000466054 EDDM3AQ14507 147 aa0.83□□□□□ -2.28
LRCH3-211ENST00000466054 RNASE10Q5GAN6 216 aaKnown RBP0.83□□□□□ -2.28
LRCH3-211ENST00000466054 C12orf45Q8N5I9 185 aaPredicted RBP0.83□□□□□ -2.28
LRCH3-211ENST00000466054 GDPD1Q8N9F7 314 aa0.83□□□□□ -2.28
LRCH3-211ENST00000466054 OR52R1Q8NGF1 315 aa0.83□□□□□ -2.28
LRCH3-211ENST00000466054 C4orf3Q8WVX3 66 aa0.83□□□□□ -2.28
LRCH3-211ENST00000466054 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.83□□□□□ -2.28
LRCH3-211ENST00000466054 ACER3Q9NUN7 267 aa0.83□□□□□ -2.28
LRCH3-211ENST00000466054 RASL12Q9NYN1 266 aa0.83□□□□□ -2.28
LRCH3-211ENST00000466054 CEP192Q8TEP8 1941 aa0.83□□□□□ -2.28
LRCH3-211ENST00000466054 TNRC6AQ8NDV7 1962 aaKnown RBP0.83□□□□□ -2.28
LRCH3-211ENST00000466054 NOTCH1P46531 2555 aa0.82□□□□□ -2.28
LRCH3-211ENST00000466054 A0A087WUJ7 227 aa0.82□□□□□ -2.28
LRCH3-211ENST00000466054 A0A087X0T9 212 aa0.82□□□□□ -2.28
LRCH3-211ENST00000466054 TRBV6-8A0A0A6YYG3 113 aa0.82□□□□□ -2.28
LRCH3-211ENST00000466054 hADV38S2A0JD32 116 aa0.82□□□□□ -2.28
LRCH3-211ENST00000466054 INE1O15225 51 aa0.82□□□□□ -2.28
LRCH3-211ENST00000466054 AP3S2P59780 193 aa0.82□□□□□ -2.28
LRCH3-211ENST00000466054 HIST1H3AP68431 136 aa0.82□□□□□ -2.28
LRCH3-211ENST00000466054 H3F3AP84243 136 aa0.82□□□□□ -2.28
LRCH3-211ENST00000466054 AESQ08117 197 aa0.82□□□□□ -2.28
LRCH3-211ENST00000466054 C12orf74Q32Q52 190 aa0.82□□□□□ -2.28
LRCH3-211ENST00000466054 C1orf137Q5JT78 98 aa0.82□□□□□ -2.28
LRCH3-211ENST00000466054 GDF5OSQ5U4N7 250 aa0.82□□□□□ -2.28
LRCH3-211ENST00000466054 TRIM4Q9C037 500 aa0.82□□□□□ -2.28
LRCH3-211ENST00000466054 RNF122Q9H9V4 155 aa0.82□□□□□ -2.28
LRCH3-211ENST00000466054 TENM3Q9P273 2699 aa0.81□□□□□ -2.28
LRCH3-211ENST00000466054 J3QRK9 145 aa0.81□□□□□ -2.28
LRCH3-211ENST00000466054 ZNF682O95780 498 aa0.81□□□□□ -2.28
LRCH3-211ENST00000466054 PPIBP23284 216 aaKnown RBP0.81□□□□□ -2.28
LRCH3-211ENST00000466054 CNBPP62633 177 aaKnown RBP0.81□□□□□ -2.28
LRCH3-211ENST00000466054 ITFG2Q969R8 447 aa0.81□□□□□ -2.28
LRCH3-211ENST00000466054 MED1Q15648 1581 aaPredicted RBP0.81□□□□□ -2.28
LRCH3-211ENST00000466054 PLXND1Q9Y4D7 1925 aa0.81□□□□□ -2.28
LRCH3-211ENST00000466054 FBN2P35556 2912 aa0.81□□□□□ -2.28
LRCH3-211ENST00000466054 TAF1LQ8IZX4 1826 aa0.8□□□□□ -2.28
LRCH3-211ENST00000466054 hCG_1818297A0A087WSY0 165 aa0.8□□□□□ -2.28
LRCH3-211ENST00000466054 SMIM9A6NGZ8 99 aa0.8□□□□□ -2.28
LRCH3-211ENST00000466054 A8MT66 165 aa0.8□□□□□ -2.28
LRCH3-211ENST00000466054 CLDN25C9JDP6 229 aa0.8□□□□□ -2.28
LRCH3-211ENST00000466054 LYPLA2O95372 231 aa0.8□□□□□ -2.28
LRCH3-211ENST00000466054 RPS17P08708 135 aaKnown RBP0.8□□□□□ -2.28
LRCH3-211ENST00000466054 RANP62826 216 aaKnown RBP0.8□□□□□ -2.28
LRCH3-211ENST00000466054 TSNQ15631 228 aaKnown RBP0.8□□□□□ -2.28
LRCH3-211ENST00000466054 C3orf56Q8N813 242 aa0.8□□□□□ -2.28
LRCH3-211ENST00000466054 TEX47Q8TBZ9 253 aa0.8□□□□□ -2.28
LRCH3-211ENST00000466054 RTL1A6NKG5 1358 aa0.8□□□□□ -2.28
LRCH3-211ENST00000466054 PIK3C2GO75747 1445 aa0.8□□□□□ -2.28
LRCH3-211ENST00000466054 TCRBP04435 133 aa0.79□□□□□ -2.28
LRCH3-211ENST00000466054 SERPINE1P05121 402 aa0.79□□□□□ -2.28
LRCH3-211ENST00000466054 C8GP07360 202 aa0.79□□□□□ -2.28
LRCH3-211ENST00000466054 ANP32AP39687 249 aaKnown RBP0.79□□□□□ -2.28
LRCH3-211ENST00000466054 LSM6P62312 80 aaKnown RBP0.79□□□□□ -2.28
LRCH3-211ENST00000466054 TMEM97Q5BJF2 176 aa0.79□□□□□ -2.28
LRCH3-211ENST00000466054 BRMS1LQ5PSV4 323 aa0.79□□□□□ -2.28
LRCH3-211ENST00000466054 LCA10Q71F78 164 aa0.79□□□□□ -2.28
LRCH3-211ENST00000466054 HIST1H2BLQ99880 126 aa0.79□□□□□ -2.28
LRCH3-211ENST00000466054 OR51V1Q9H2C8 321 aa0.79□□□□□ -2.28
LRCH3-211ENST00000466054 TVP23BQ9NYZ1 205 aa0.79□□□□□ -2.28
LRCH3-211ENST00000466054 V9GYY5 206 aaPredicted RBP0.79□□□□□ -2.28
LRCH3-211ENST00000466054 LAMA4Q16363 1823 aa0.78□□□□□ -2.28
LRCH3-211ENST00000466054 PDE6DO43924 150 aa0.78□□□□□ -2.28
LRCH3-211ENST00000466054 ITGB3BPQ13352 177 aaPredicted RBP0.78□□□□□ -2.28
LRCH3-211ENST00000466054 ESRGQ1W209 222 aa0.78□□□□□ -2.28
LRCH3-211ENST00000466054 Q6Q795 121 aa0.78□□□□□ -2.28
LRCH3-211ENST00000466054 SOSTDC1Q6X4U4 206 aa0.78□□□□□ -2.28
LRCH3-211ENST00000466054 OR8D4Q8NGM9 314 aa0.78□□□□□ -2.28
LRCH3-211ENST00000466054 ADAT3Q96EY9 351 aaPredicted RBP0.78□□□□□ -2.28
LRCH3-211ENST00000466054 C14orf132Q9NPU4 83 aa0.78□□□□□ -2.28
LRCH3-211ENST00000466054 PRELID3BQ9Y3B1 194 aa0.78□□□□□ -2.28
LRCH3-211ENST00000466054 MCM3APO60318 1980 aa0.77□□□□□ -2.29
LRCH3-211ENST00000466054 TRAV3A0A0B4J244 114 aa0.77□□□□□ -2.29
LRCH3-211ENST00000466054 ZNF736B4DX44 427 aaPredicted RBP0.77□□□□□ -2.29
LRCH3-211ENST00000466054 HAND1O96004 215 aa0.77□□□□□ -2.29
LRCH3-211ENST00000466054 SRSF6Q13247 344 aaKnown RBP0.77□□□□□ -2.29
LRCH3-211ENST00000466054 MPV17LQ2QL34 196 aa0.77□□□□□ -2.29
LRCH3-211ENST00000466054 DEFB113Q30KQ7 82 aa0.77□□□□□ -2.29
LRCH3-211ENST00000466054 LINC00301Q8NCQ3 95 aa0.77□□□□□ -2.29
LRCH3-211ENST00000466054 OR51A2Q8NGJ7 313 aa0.77□□□□□ -2.29
LRCH3-211ENST00000466054 OR2T10Q8NGZ9 312 aa0.77□□□□□ -2.29
LRCH3-211ENST00000466054 WFDC5Q8TCV5 224 aa0.77□□□□□ -2.29
LRCH3-211ENST00000466054 C14orf105Q9NVL8 296 aa0.77□□□□□ -2.29
LRCH3-211ENST00000466054 GLTPQ9NZD2 209 aa0.77□□□□□ -2.29
LRCH3-211ENST00000466054 MYO3BQ8WXR4 1341 aa0.77□□□□□ -2.29
LRCH3-211ENST00000466054 SCN3AQ9NY46 2000 aa0.77□□□□□ -2.29
LRCH3-211ENST00000466054 CYB5BO43169 146 aa0.76□□□□□ -2.29
LRCH3-211ENST00000466054 PRB4P10163 310 aaPredicted RBP0.76□□□□□ -2.29
LRCH3-211ENST00000466054 CDKN2CP42773 168 aa0.76□□□□□ -2.29
LRCH3-211ENST00000466054 TEX261Q6UWH6 196 aa0.76□□□□□ -2.29
LRCH3-211ENST00000466054 SLC25A40Q8TBP6 338 aa0.76□□□□□ -2.29
LRCH3-211ENST00000466054 FAM172AQ8WUF8 416 aa0.76□□□□□ -2.29
LRCH3-211ENST00000466054 PPP1R14BQ96C90 147 aa0.76□□□□□ -2.29
LRCH3-211ENST00000466054 C6orf62Q9GZU0 229 aaPredicted RBP0.76□□□□□ -2.29
LRCH3-211ENST00000466054 RNASE7Q9H1E1 156 aaKnown RBP0.76□□□□□ -2.29
LRCH3-211ENST00000466054 CDC42SE1Q9NRR8 79 aa0.76□□□□□ -2.29
LRCH3-211ENST00000466054 UQCC1Q9NVA1 299 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms