RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 CT83Q5H943 113 aa15.68■□□□□ 0.1
HMGA1-205ENST00000447654 PSMG4Q5JS54 123 aa15.68■□□□□ 0.1
HMGA1-205ENST00000447654 TRGV8A0A0C4DH27 118 aa15.68■□□□□ 0.1
HMGA1-205ENST00000447654 GFRA3O60609 400 aa15.68■□□□□ 0.1
HMGA1-205ENST00000447654 IGHV3-7P01780 117 aa15.68■□□□□ 0.1
HMGA1-205ENST00000447654 CELA3AP09093 270 aa15.68■□□□□ 0.1
HMGA1-205ENST00000447654 B4GALT1P15291 398 aa15.68■□□□□ 0.1
HMGA1-205ENST00000447654 OR10D3Q8NH80 312 aa15.68■□□□□ 0.1
HMGA1-205ENST00000447654 ZNF479Q96JC4 524 aa15.68■□□□□ 0.1
HMGA1-205ENST00000447654 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.67■□□□□ 0.1
HMGA1-205ENST00000447654 KLRC4-KLRK1H3BQV0 150 aa15.67■□□□□ 0.1
HMGA1-205ENST00000447654 KIR2DL2P43627 348 aaPredicted RBP15.67■□□□□ 0.1
HMGA1-205ENST00000447654 GUSBP1Q15486 140 aa15.67■□□□□ 0.1
HMGA1-205ENST00000447654 DHRS13Q6UX07 377 aa15.67■□□□□ 0.1
HMGA1-205ENST00000447654 ZNF418Q8TF45 676 aaPredicted RBP15.67■□□□□ 0.1
HMGA1-205ENST00000447654 PGPEP1Q9NXJ5 209 aa15.67■□□□□ 0.1
HMGA1-205ENST00000447654 TEX50A0A1B0GTY4 177 aa15.66■□□□□ 0.1
HMGA1-205ENST00000447654 IGFBP2P18065 325 aa15.66■□□□□ 0.1
HMGA1-205ENST00000447654 CA6P23280 308 aa15.66■□□□□ 0.1
HMGA1-205ENST00000447654 GNG3P63215 75 aa15.66■□□□□ 0.1
HMGA1-205ENST00000447654 GCM1Q9NP62 436 aa15.66■□□□□ 0.1
HMGA1-205ENST00000447654 MPC1Q9Y5U8 109 aa15.66■□□□□ 0.1
HMGA1-205ENST00000447654 DUTP33316 252 aaKnown RBP15.66■□□□□ 0.1
HMGA1-205ENST00000447654 GPR12P47775 334 aa15.66■□□□□ 0.1
HMGA1-205ENST00000447654 LCNL1Q6ZST4 164 aa15.66■□□□□ 0.1
HMGA1-205ENST00000447654 Q8IYB0 196 aa15.66■□□□□ 0.1
HMGA1-205ENST00000447654 GALMQ96C23 342 aa15.66■□□□□ 0.1
HMGA1-205ENST00000447654 ZNF747Q9BV97 191 aa15.66■□□□□ 0.1
HMGA1-205ENST00000447654 BOD1L1Q8NFC6 3051 aa15.65■□□□□ 0.1
HMGA1-205ENST00000447654 FOXE3Q13461 319 aa15.65■□□□□ 0.1
HMGA1-205ENST00000447654 FGFBP3Q8TAT2 258 aa15.65■□□□□ 0.1
HMGA1-205ENST00000447654 ZNF503Q96F45 646 aa15.65■□□□□ 0.1
HMGA1-205ENST00000447654 ABHD17AQ96GS6 310 aa15.65■□□□□ 0.1
HMGA1-205ENST00000447654 CSN1S1P47710 185 aa15.65■□□□□ 0.1
HMGA1-205ENST00000447654 GFRA4Q9GZZ7 299 aa15.65■□□□□ 0.1
HMGA1-205ENST00000447654 HILPDAQ9Y5L2 63 aa15.65■□□□□ 0.1
HMGA1-205ENST00000447654 GTSF1Q8WW33 167 aa15.64■□□□□ 0.09
HMGA1-205ENST00000447654 RAB37Q96AX2 223 aa15.64■□□□□ 0.09
HMGA1-205ENST00000447654 NABP2Q9BQ15 211 aa15.64■□□□□ 0.09
HMGA1-205ENST00000447654 JPT1Q9UK76 154 aa15.64■□□□□ 0.09
HMGA1-205ENST00000447654 OTOGLQ3ZCN5 2332 aa15.64■□□□□ 0.09
HMGA1-205ENST00000447654 SS18L1O75177 396 aaPredicted RBP15.63■□□□□ 0.09
HMGA1-205ENST00000447654 MT-CO3P00414 261 aa15.63■□□□□ 0.09
HMGA1-205ENST00000447654 LGALS9BQ3B8N2 356 aa15.63■□□□□ 0.09
HMGA1-205ENST00000447654 LGALS9CQ6DKI2 356 aa15.63■□□□□ 0.09
HMGA1-205ENST00000447654 TTC9CQ8N5M4 171 aa15.63■□□□□ 0.09
HMGA1-205ENST00000447654 NAA38Q9BRA0 125 aaKnown RBP15.63■□□□□ 0.09
HMGA1-205ENST00000447654 SPAARA0A1B0GVQ0 90 aa15.63■□□□□ 0.09
HMGA1-205ENST00000447654 A8MWL6 223 aa15.63■□□□□ 0.09
HMGA1-205ENST00000447654 J3QT63 122 aa15.63■□□□□ 0.09
HMGA1-205ENST00000447654 IGHV3-9P01782 118 aa15.63■□□□□ 0.09
HMGA1-205ENST00000447654 ZNF808Q8N4W9 903 aaPredicted RBP15.63■□□□□ 0.09
HMGA1-205ENST00000447654 MRPL32Q9BYC8 188 aaKnown RBP15.63■□□□□ 0.09
HMGA1-205ENST00000447654 C7orf69Q9H7B7 122 aa15.63■□□□□ 0.09
HMGA1-205ENST00000447654 MED12LQ86YW9 2145 aa15.63■□□□□ 0.09
HMGA1-205ENST00000447654 DOCK7Q96N67 2140 aa15.62■□□□□ 0.09
HMGA1-205ENST00000447654 VWC2LB2RUY7 222 aa15.62■□□□□ 0.09
HMGA1-205ENST00000447654 PLGLB1Q02325 96 aa15.62■□□□□ 0.09
HMGA1-205ENST00000447654 TRAT1Q6PIZ9 186 aa15.62■□□□□ 0.09
HMGA1-205ENST00000447654 NEU4Q8WWR8 484 aaPredicted RBP15.62■□□□□ 0.09
HMGA1-205ENST00000447654 ZNF488Q96MN9 340 aa15.62■□□□□ 0.09
HMGA1-205ENST00000447654 SNAI2O43623 268 aa15.62■□□□□ 0.09
HMGA1-205ENST00000447654 OR2H2O95918 312 aa15.62■□□□□ 0.09
HMGA1-205ENST00000447654 CRYGCP07315 174 aa15.62■□□□□ 0.09
HMGA1-205ENST00000447654 FOXA3P55318 350 aaPredicted RBP15.62■□□□□ 0.09
HMGA1-205ENST00000447654 LINC00696Q6ZRV3 163 aa15.62■□□□□ 0.09
HMGA1-205ENST00000447654 AAED1Q7RTV5 226 aa15.62■□□□□ 0.09
HMGA1-205ENST00000447654 ZADH2Q8N4Q0 377 aa15.62■□□□□ 0.09
HMGA1-205ENST00000447654 ZNF502Q8TBZ5 544 aa15.62■□□□□ 0.09
HMGA1-205ENST00000447654 SPAG8Q99932 426 aaPredicted RBP15.62■□□□□ 0.09
HMGA1-205ENST00000447654 HIGD1BQ9P298 99 aa15.62■□□□□ 0.09
HMGA1-205ENST00000447654 DSPP15924 2871 aaKnown RBP15.61■□□□□ 0.09
HMGA1-205ENST00000447654 C8orf88P0DMB2 117 aa15.61■□□□□ 0.09
HMGA1-205ENST00000447654 CT45A10P0DMU9 189 aa15.61■□□□□ 0.09
HMGA1-205ENST00000447654 SRYQ05066 204 aa15.61■□□□□ 0.09
HMGA1-205ENST00000447654 HES3Q5TGS1 186 aa15.61■□□□□ 0.09
HMGA1-205ENST00000447654 PRAMEF5Q5TYX0 476 aa15.61■□□□□ 0.09
HMGA1-205ENST00000447654 PRAMEF6Q5VXH4 476 aa15.61■□□□□ 0.09
HMGA1-205ENST00000447654 Q6ZR03 302 aa15.61■□□□□ 0.09
HMGA1-205ENST00000447654 ZNHIT1O43257 154 aa15.6■□□□□ 0.09
HMGA1-205ENST00000447654 CEBPDP49716 269 aaPredicted RBP15.6■□□□□ 0.09
HMGA1-205ENST00000447654 SRSF6Q13247 344 aaKnown RBP15.6■□□□□ 0.09
HMGA1-205ENST00000447654 ATP1A1-AS1Q5TC04 95 aa15.6■□□□□ 0.09
HMGA1-205ENST00000447654 PIFOQ8TCI5 191 aa15.6■□□□□ 0.09
HMGA1-205ENST00000447654 GPR82Q96P67 336 aa15.6■□□□□ 0.09
HMGA1-205ENST00000447654 CYSLTR1Q9Y271 337 aa15.6■□□□□ 0.09
HMGA1-205ENST00000447654 AMMECR1Q9Y4X0 333 aaPredicted RBP15.6■□□□□ 0.09
HMGA1-205ENST00000447654 CNOT1A5YKK6 2376 aaKnown RBP15.6■□□□□ 0.09
HMGA1-205ENST00000447654 A0A1W2PRD5 423 aa15.6■□□□□ 0.09
HMGA1-205ENST00000447654 A0A1W2PRF3 423 aa15.6■□□□□ 0.09
HMGA1-205ENST00000447654 A0A1W2PRM7 423 aa15.6■□□□□ 0.09
HMGA1-205ENST00000447654 TMEM30CPA0ZSE6 113 aa15.6■□□□□ 0.09
HMGA1-205ENST00000447654 AP5S1Q9NUS5 200 aa15.6■□□□□ 0.09
HMGA1-205ENST00000447654 MUC6Q6W4X9 2439 aa15.6■□□□□ 0.09
HMGA1-205ENST00000447654 OOEPA6NGQ2 149 aa15.59■□□□□ 0.09
HMGA1-205ENST00000447654 ACTL6BO94805 426 aa15.59■□□□□ 0.09
HMGA1-205ENST00000447654 MAGEA5P43359 124 aa15.59■□□□□ 0.09
HMGA1-205ENST00000447654 NANOS1Q8WY41 292 aaKnown RBP15.59■□□□□ 0.09
HMGA1-205ENST00000447654 RPP21Q9H633 154 aaKnown RBP15.59■□□□□ 0.09
HMGA1-205ENST00000447654 SP1P08047 785 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms