RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 IGKV3-7A0A075B6H7 116 aa10.03□□□□□ -0.8
CDC42BPA-203ENST00000366766 PLSCR4Q9NRQ2 329 aa10.03□□□□□ -0.8
CDC42BPA-203ENST00000366766 C3orf36Q3SXR2 165 aa10.02□□□□□ -0.8
CDC42BPA-203ENST00000366766 ORMDL2Q53FV1 153 aa10.02□□□□□ -0.8
CDC42BPA-203ENST00000366766 TRGV9Q99603 122 aa10.02□□□□□ -0.8
CDC42BPA-203ENST00000366766 FOXI3A8MTJ6 420 aaPredicted RBP10.02□□□□□ -0.81
CDC42BPA-203ENST00000366766 FABP5P3A8MUU1 101 aa10.02□□□□□ -0.81
CDC42BPA-203ENST00000366766 EPDR1Q9UM22 224 aa10.02□□□□□ -0.81
CDC42BPA-203ENST00000366766 DNAL4O96015 105 aa10.02□□□□□ -0.81
CDC42BPA-203ENST00000366766 TRGV3P03979 118 aa10.02□□□□□ -0.81
CDC42BPA-203ENST00000366766 ZNF600Q6ZNG1 722 aa10.02□□□□□ -0.81
CDC42BPA-203ENST00000366766 ADIPOQQ15848 244 aa10.02□□□□□ -0.81
CDC42BPA-203ENST00000366766 RPUSD1Q9UJJ7 312 aaKnown RBP10.02□□□□□ -0.81
CDC42BPA-203ENST00000366766 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.02□□□□□ -0.81
CDC42BPA-203ENST00000366766 IGKV1D-33P01593 117 aa10.02□□□□□ -0.81
CDC42BPA-203ENST00000366766 IGKV1-33P01594 117 aa10.02□□□□□ -0.81
CDC42BPA-203ENST00000366766 NCOR1P1Q9H4R4 102 aa10.02□□□□□ -0.81
CDC42BPA-203ENST00000366766 ZFHX2Q9C0A1 2572 aaPredicted RBP10.02□□□□□ -0.81
CDC42BPA-203ENST00000366766 LTBP2Q14767 1821 aa10.02□□□□□ -0.81
CDC42BPA-203ENST00000366766 LYPD1Q8N2G4 141 aa10.02□□□□□ -0.81
CDC42BPA-203ENST00000366766 FAM216BQ8N7L0 139 aa10.02□□□□□ -0.81
CDC42BPA-203ENST00000366766 C8orf46Q8TAG6 207 aa10.02□□□□□ -0.81
CDC42BPA-203ENST00000366766 ZNF56Q15929 161 aa10.02□□□□□ -0.81
CDC42BPA-203ENST00000366766 C9orf106Q8NAJ2 232 aa10.02□□□□□ -0.81
CDC42BPA-203ENST00000366766 TTC9CQ8N5M4 171 aa10.01□□□□□ -0.81
CDC42BPA-203ENST00000366766 E9PQ18 207 aa10.01□□□□□ -0.81
CDC42BPA-203ENST00000366766 TRAV9-2A0A087WT02 112 aa10.01□□□□□ -0.81
CDC42BPA-203ENST00000366766 CELA3BP08861 270 aa10.01□□□□□ -0.81
CDC42BPA-203ENST00000366766 CLPSP04118 112 aa10.01□□□□□ -0.81
CDC42BPA-203ENST00000366766 KIAA1644Q3SXP7 199 aa10.01□□□□□ -0.81
CDC42BPA-203ENST00000366766 NRN1Q9NPD7 142 aa10.01□□□□□ -0.81
CDC42BPA-203ENST00000366766 ATRAIDQ6UW56 229 aa10.01□□□□□ -0.81
CDC42BPA-203ENST00000366766 ZNF319Q9P2F9 582 aa10.01□□□□□ -0.81
CDC42BPA-203ENST00000366766 NOTCH2Q04721 2471 aa10.01□□□□□ -0.81
CDC42BPA-203ENST00000366766 J3KRW8 73 aa10.01□□□□□ -0.81
CDC42BPA-203ENST00000366766 APOHP02749 345 aaPredicted RBP10.01□□□□□ -0.81
CDC42BPA-203ENST00000366766 CLDN16Q9Y5I7 305 aa10.01□□□□□ -0.81
CDC42BPA-203ENST00000366766 SEC11AP67812 179 aa10□□□□□ -0.81
CDC42BPA-203ENST00000366766 FAM168AQ92567 244 aa10□□□□□ -0.81
CDC42BPA-203ENST00000366766 CTAG1AP78358 180 aa10□□□□□ -0.81
CDC42BPA-203ENST00000366766 MINOS1Q5TGZ0 78 aa10□□□□□ -0.81
CDC42BPA-203ENST00000366766 FBXL15Q9H469 300 aa10□□□□□ -0.81
CDC42BPA-203ENST00000366766 MINOS1-NBL1R4GNA1 71 aa10□□□□□ -0.81
CDC42BPA-203ENST00000366766 C9orf172C9J069 976 aa10□□□□□ -0.81
CDC42BPA-203ENST00000366766 HBDP02042 147 aa10□□□□□ -0.81
CDC42BPA-203ENST00000366766 MIR17HGQ75NE6 70 aa10□□□□□ -0.81
CDC42BPA-203ENST00000366766 MS4A6AQ9H2W1 248 aa10□□□□□ -0.81
CDC42BPA-203ENST00000366766 MRPL16Q9NX20 251 aaKnown RBP10□□□□□ -0.81
CDC42BPA-203ENST00000366766 NUP37Q8NFH4 326 aa10□□□□□ -0.81
CDC42BPA-203ENST00000366766 SERF1AO75920 110 aa10□□□□□ -0.81
CDC42BPA-203ENST00000366766 OR5AN1Q8NGI8 311 aa10□□□□□ -0.81
CDC42BPA-203ENST00000366766 ATP5G3P48201 142 aa10□□□□□ -0.81
CDC42BPA-203ENST00000366766 TREML4Q6UXN2 200 aa10□□□□□ -0.81
CDC42BPA-203ENST00000366766 COLCA2A8K830 154 aa9.99□□□□□ -0.81
CDC42BPA-203ENST00000366766 C7orf71A4D174 169 aa9.99□□□□□ -0.81
CDC42BPA-203ENST00000366766 NIT1Q86X76 327 aa9.99□□□□□ -0.81
CDC42BPA-203ENST00000366766 DEPPQ9NTK1 212 aa9.99□□□□□ -0.81
CDC42BPA-203ENST00000366766 SLC25A2Q9BXI2 301 aa9.99□□□□□ -0.81
CDC42BPA-203ENST00000366766 REG4Q9BYZ8 158 aa9.99□□□□□ -0.81
CDC42BPA-203ENST00000366766 KIAA1549Q9HCM3 1950 aa9.99□□□□□ -0.81
CDC42BPA-203ENST00000366766 PRSS2P07478 247 aa9.99□□□□□ -0.81
CDC42BPA-203ENST00000366766 SPSB3Q6PJ21 355 aa9.99□□□□□ -0.81
CDC42BPA-203ENST00000366766 TMEM101Q96IK0 257 aa9.99□□□□□ -0.81
CDC42BPA-203ENST00000366766 NPFFR1Q9GZQ6 430 aa9.99□□□□□ -0.81
CDC42BPA-203ENST00000366766 PDE6HQ13956 83 aa9.99□□□□□ -0.81
CDC42BPA-203ENST00000366766 SLC17A3O00476 420 aa9.99□□□□□ -0.81
CDC42BPA-203ENST00000366766 CYTL1Q9NRR1 136 aa9.99□□□□□ -0.81
CDC42BPA-203ENST00000366766 WFDC3Q8IUB2 231 aa9.99□□□□□ -0.81
CDC42BPA-203ENST00000366766 HIST1H2BLQ99880 126 aa9.99□□□□□ -0.81
CDC42BPA-203ENST00000366766 OR9G4Q8NGQ1 327 aa9.99□□□□□ -0.81
CDC42BPA-203ENST00000366766 TNFRSF18Q9Y5U5 241 aa9.99□□□□□ -0.81
CDC42BPA-203ENST00000366766 PEAR1Q5VY43 1037 aaPredicted RBP9.98□□□□□ -0.81
CDC42BPA-203ENST00000366766 OR5A1Q8NGJ0 315 aa9.98□□□□□ -0.81
CDC42BPA-203ENST00000366766 JKAMPQ9P055 326 aa9.98□□□□□ -0.81
CDC42BPA-203ENST00000366766 LAMTOR2Q9Y2Q5 125 aa9.98□□□□□ -0.81
CDC42BPA-203ENST00000366766 DSCR9P59020 149 aa9.98□□□□□ -0.81
CDC42BPA-203ENST00000366766 FAM27E3Q08E93 113 aa9.98□□□□□ -0.81
CDC42BPA-203ENST00000366766 SCGB3A1Q96QR1 104 aa9.98□□□□□ -0.81
CDC42BPA-203ENST00000366766 GGTLC1Q9BX51 225 aa9.98□□□□□ -0.81
CDC42BPA-203ENST00000366766 EML5Q05BV3 1969 aa9.98□□□□□ -0.81
CDC42BPA-203ENST00000366766 A0A1B0GV90 55 aa9.98□□□□□ -0.81
CDC42BPA-203ENST00000366766 NPFFO15130 113 aa9.98□□□□□ -0.81
CDC42BPA-203ENST00000366766 PEMTQ9UBM1 199 aa9.98□□□□□ -0.81
CDC42BPA-203ENST00000366766 DUX5Q96PT3 197 aa9.98□□□□□ -0.81
CDC42BPA-203ENST00000366766 IGKV1-12A0A0C4DH73 117 aa9.98□□□□□ -0.81
CDC42BPA-203ENST00000366766 IGKV1D-12P01611 117 aa9.98□□□□□ -0.81
CDC42BPA-203ENST00000366766 ANAPC10Q9UM13 185 aa9.98□□□□□ -0.81
CDC42BPA-203ENST00000366766 SRSF1Q07955 248 aaKnown RBP eCLIP9.98□□□□□ -0.81
CDC42BPA-203ENST00000366766 PRSS8Q16651 343 aa9.98□□□□□ -0.81
CDC42BPA-203ENST00000366766 TYMSP04818 313 aa9.97□□□□□ -0.81
CDC42BPA-203ENST00000366766 C5orf30Q96GV9 206 aa9.97□□□□□ -0.81
CDC42BPA-203ENST00000366766 MRPL27Q9P0M9 148 aaKnown RBP9.97□□□□□ -0.81
CDC42BPA-203ENST00000366766 A0A1B0GV72 72 aa9.97□□□□□ -0.81
CDC42BPA-203ENST00000366766 DUSP14O95147 198 aaKnown RBP9.97□□□□□ -0.81
CDC42BPA-203ENST00000366766 ATP1A1-AS1Q5TC04 95 aa9.97□□□□□ -0.81
CDC42BPA-203ENST00000366766 DCTN5Q9BTE1 182 aa9.97□□□□□ -0.81
CDC42BPA-203ENST00000366766 WNT10AQ9GZT5 417 aa9.97□□□□□ -0.81
CDC42BPA-203ENST00000366766 IGKV1-27A0A075B6S5 117 aa9.97□□□□□ -0.81
CDC42BPA-203ENST00000366766 GPR183P32249 361 aa9.97□□□□□ -0.81
CDC42BPA-203ENST00000366766 BEND2Q8NDZ0 799 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms