RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Q80VP5 184 aa12.29□□□□□ -0.44
Nup88-202ENSMUST00000108530 Txnl1Q8CDN6 289 aaKnown RBP12.29□□□□□ -0.44
Nup88-202ENSMUST00000108530 PurgQ8R4E6 350 aaKnown RBP12.29□□□□□ -0.44
Nup88-202ENSMUST00000108530 Olfr1141Q8VFQ7 311 aa12.29□□□□□ -0.44
Nup88-202ENSMUST00000108530 Bex3Q9WTZ9 124 aa12.29□□□□□ -0.44
Nup88-202ENSMUST00000108530 Dscaml1Q4VA61 2053 aa12.29□□□□□ -0.44
Nup88-202ENSMUST00000108530 Trav15-2-dv6-2A0A075B650 123 aa12.29□□□□□ -0.44
Nup88-202ENSMUST00000108530 Gm21117A0A087WPJ9 222 aa12.29□□□□□ -0.44
Nup88-202ENSMUST00000108530 Gm20937A0A087WQA3 222 aa12.29□□□□□ -0.44
Nup88-202ENSMUST00000108530 Gm21258A0A087WQC7 222 aa12.29□□□□□ -0.44
Nup88-202ENSMUST00000108530 Gm14403A2BFU4 402 aa12.29□□□□□ -0.44
Nup88-202ENSMUST00000108530 Arl16B1ATY8 173 aa12.29□□□□□ -0.44
Nup88-202ENSMUST00000108530 Mas1P30554 324 aa12.29□□□□□ -0.44
Nup88-202ENSMUST00000108530 Kcnj3P63250 501 aa12.29□□□□□ -0.44
Nup88-202ENSMUST00000108530 Gimap1P70224 277 aa12.29□□□□□ -0.44
Nup88-202ENSMUST00000108530 StumQ0VBF8 141 aa12.29□□□□□ -0.44
Nup88-202ENSMUST00000108530 Xaf1Q5NBU8 273 aa12.29□□□□□ -0.44
Nup88-202ENSMUST00000108530 St8sia3Q64689 380 aa12.29□□□□□ -0.44
Nup88-202ENSMUST00000108530 Tmem106cQ80VP8 260 aa12.29□□□□□ -0.44
Nup88-202ENSMUST00000108530 Sdhaf2Q8C6I2 164 aa12.29□□□□□ -0.44
Nup88-202ENSMUST00000108530 Uqcr10Q8R1I1 64 aa12.29□□□□□ -0.44
Nup88-202ENSMUST00000108530 Vmn1r230Q8R2A2 316 aa12.29□□□□□ -0.44
Nup88-202ENSMUST00000108530 Olfr770Q8VGC2 311 aa12.29□□□□□ -0.44
Nup88-202ENSMUST00000108530 Rnase6Q9D244 153 aa12.29□□□□□ -0.44
Nup88-202ENSMUST00000108530 Cd200r1Q9ES57 326 aa12.29□□□□□ -0.44
Nup88-202ENSMUST00000108530 Timm9Q9WV98 89 aaKnown RBP12.29□□□□□ -0.44
Nup88-202ENSMUST00000108530 Fxyd1Q9Z239 92 aa12.29□□□□□ -0.44
Nup88-202ENSMUST00000108530 Olfr753-ps1A0A140LHN3 164 aa12.28□□□□□ -0.44
Nup88-202ENSMUST00000108530 Olfr1150-ps1A0A1L1STL1 316 aa12.28□□□□□ -0.44
Nup88-202ENSMUST00000108530 Mmp27D3YV89 551 aa12.28□□□□□ -0.44
Nup88-202ENSMUST00000108530 Npffr1E9Q468 432 aa12.28□□□□□ -0.44
Nup88-202ENSMUST00000108530 Olfr427E9Q7E7 315 aa12.28□□□□□ -0.44
Nup88-202ENSMUST00000108530 Olfr906K7N5P3 311 aa12.28□□□□□ -0.44
Nup88-202ENSMUST00000108530 Gm3486L7N2D0 199 aa12.28□□□□□ -0.44
Nup88-202ENSMUST00000108530 Sdc1P18828 311 aa12.28□□□□□ -0.44
Nup88-202ENSMUST00000108530 Fcer1gP20491 86 aa12.28□□□□□ -0.44
Nup88-202ENSMUST00000108530 Gm10192Q3V0S1 108 aa12.28□□□□□ -0.44
Nup88-202ENSMUST00000108530 Olfr1396Q7TQS8 315 aa12.28□□□□□ -0.44
Nup88-202ENSMUST00000108530 Olfr279Q8VFD8 310 aa12.28□□□□□ -0.44
Nup88-202ENSMUST00000108530 Tmem33Q9CR67 247 aa12.28□□□□□ -0.44
Nup88-202ENSMUST00000108530 Dmrtc1c1Q9D410 238 aa12.28□□□□□ -0.44
Nup88-202ENSMUST00000108530 4933407L21RikQ9D476 131 aa12.28□□□□□ -0.44
Nup88-202ENSMUST00000108530 Tspan4Q9DCK3 238 aa12.28□□□□□ -0.44
Nup88-202ENSMUST00000108530 Nat8Q9JIY7 227 aa12.28□□□□□ -0.44
Nup88-202ENSMUST00000108530 Herpud1Q9JJK5 391 aa12.28□□□□□ -0.44
Nup88-202ENSMUST00000108530 Tpsg1Q9QUL7 311 aa12.28□□□□□ -0.44
Nup88-202ENSMUST00000108530 Trav18A0A075B656 109 aa12.28□□□□□ -0.44
Nup88-202ENSMUST00000108530 Gm4778L7N229 365 aa12.28□□□□□ -0.44
Nup88-202ENSMUST00000108530 Fli1P26323 452 aa12.28□□□□□ -0.44
Nup88-202ENSMUST00000108530 Il11P47873 199 aa12.28□□□□□ -0.44
Nup88-202ENSMUST00000108530 Nkx2-1P50220 372 aa12.28□□□□□ -0.44
Nup88-202ENSMUST00000108530 Olfr358Q7TRY5 330 aa12.28□□□□□ -0.44
Nup88-202ENSMUST00000108530 Olfr632Q9EPN9 317 aa12.28□□□□□ -0.44
Nup88-202ENSMUST00000108530 Svep1A2AVA0 3567 aa12.27□□□□□ -0.44
Nup88-202ENSMUST00000108530 Olfr1098A2AVB0 315 aa12.27□□□□□ -0.44
Nup88-202ENSMUST00000108530 Nkx6-2D3Z4R4 277 aa12.27□□□□□ -0.44
Nup88-202ENSMUST00000108530 P01649 108 aa12.27□□□□□ -0.44
Nup88-202ENSMUST00000108530 P01783 136 aa12.27□□□□□ -0.44
Nup88-202ENSMUST00000108530 Slc6a9P28571 692 aa12.27□□□□□ -0.44
Nup88-202ENSMUST00000108530 Pla2g2cP48076 150 aa12.27□□□□□ -0.44
Nup88-202ENSMUST00000108530 Tpsab1Q02844 273 aa12.27□□□□□ -0.44
Nup88-202ENSMUST00000108530 Fam222bQ6P539 562 aa12.27□□□□□ -0.44
Nup88-202ENSMUST00000108530 Gm9837Q8C607 126 aa12.27□□□□□ -0.44
Nup88-202ENSMUST00000108530 Olfr167Q8VGJ5 312 aa12.27□□□□□ -0.44
Nup88-202ENSMUST00000108530 Fbxo36Q9CQ24 188 aa12.27□□□□□ -0.44
Nup88-202ENSMUST00000108530 Cdc42ep3Q9CQC5 254 aa12.27□□□□□ -0.44
Nup88-202ENSMUST00000108530 Lipt2Q9D009 231 aa12.27□□□□□ -0.44
Nup88-202ENSMUST00000108530 TracA0A075B662 137 aa12.27□□□□□ -0.45
Nup88-202ENSMUST00000108530 Vmn1r5B2RQT2 315 aa12.27□□□□□ -0.45
Nup88-202ENSMUST00000108530 Gm614Q3V2K1 191 aa12.27□□□□□ -0.45
Nup88-202ENSMUST00000108530 Nup35Q8R4R6 325 aa12.27□□□□□ -0.45
Nup88-202ENSMUST00000108530 Slc17a9Q8VCL5 447 aa12.27□□□□□ -0.45
Nup88-202ENSMUST00000108530 Olfr523Q8VFE7 317 aa12.27□□□□□ -0.45
Nup88-202ENSMUST00000108530 Olfr702Q920Z2 318 aa12.27□□□□□ -0.45
Nup88-202ENSMUST00000108530 Eaf1Q9D4C5 268 aa12.27□□□□□ -0.45
Nup88-202ENSMUST00000108530 Lypd8Q9D7S0 255 aa12.27□□□□□ -0.45
Nup88-202ENSMUST00000108530 Abhd5Q9DBL9 351 aa12.27□□□□□ -0.45
Nup88-202ENSMUST00000108530 Ly96Q9JHF9 160 aa12.27□□□□□ -0.45
Nup88-202ENSMUST00000108530 Fam208bQ5DTT3 2382 aa12.27□□□□□ -0.45
Nup88-202ENSMUST00000108530 Gm21095A0A087WR14 222 aa12.26□□□□□ -0.45
Nup88-202ENSMUST00000108530 Gm20824A0A087WS97 222 aa12.26□□□□□ -0.45
Nup88-202ENSMUST00000108530 Iqcf6G3UWF2 157 aa12.26□□□□□ -0.45
Nup88-202ENSMUST00000108530 Ercc1P07903 298 aa12.26□□□□□ -0.45
Nup88-202ENSMUST00000108530 Cd5P13379 494 aa12.26□□□□□ -0.45
Nup88-202ENSMUST00000108530 B4galt1P15535 399 aa12.26□□□□□ -0.45
Nup88-202ENSMUST00000108530 C5ar1P30993 351 aa12.26□□□□□ -0.45
Nup88-202ENSMUST00000108530 PjvkQ0ZLH2 352 aa12.26□□□□□ -0.45
Nup88-202ENSMUST00000108530 Fndc4Q3TR08 231 aa12.26□□□□□ -0.45
Nup88-202ENSMUST00000108530 MENTQ569E4 350 aa12.26□□□□□ -0.45
Nup88-202ENSMUST00000108530 Zfp429Q7M6Y0 485 aa12.26□□□□□ -0.45
Nup88-202ENSMUST00000108530 C030005K15RikQ8BQN9 115 aa12.26□□□□□ -0.45
Nup88-202ENSMUST00000108530 Wasf3Q8VHI6 501 aa12.26□□□□□ -0.45
Nup88-202ENSMUST00000108530 Cyb5bQ9CQX2 146 aaKnown RBP12.26□□□□□ -0.45
Nup88-202ENSMUST00000108530 Mrpl28Q9D1B9 257 aa12.26□□□□□ -0.45
Nup88-202ENSMUST00000108530 Alkbh7Q9D6Z0 221 aa12.26□□□□□ -0.45
Nup88-202ENSMUST00000108530 Tmem126aQ9D8Y1 196 aa12.26□□□□□ -0.45
Nup88-202ENSMUST00000108530 Olfr716Q9EPG6 314 aa12.26□□□□□ -0.45
Nup88-202ENSMUST00000108530 Nek7Q9ES74 302 aa12.26□□□□□ -0.45
Nup88-202ENSMUST00000108530 Sult1b1Q9QWG7 299 aa12.26□□□□□ -0.45
Nup88-202ENSMUST00000108530 Cd5lQ9QWK4 352 aa12.26□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 10.1 ms