RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Tex36Q9D5N9 219 aa18.81■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Ighv3-4A0A0A6YXF1 117 aa18.8■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Gm2381G3UY53 305 aa18.8■□□□□ 0.6
Scn1b-201ENSMUST00000098548 EndogO08600 294 aa18.8■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Cldn1O88551 211 aa18.8■□□□□ 0.6
Scn1b-201ENSMUST00000098548 RrasP10833 218 aa18.8■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Wnt5bP22726 359 aa18.8■□□□□ 0.6
Scn1b-201ENSMUST00000098548 OsmP53347 263 aa18.8■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Lsm5P62322 91 aa18.8■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Samt2Q497M0 247 aa18.8■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Lhfpl5Q4KL25 219 aa18.8■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Slc22a27Q76M72 551 aa18.8■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Olfr1341Q7TQV4 312 aa18.8■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Poc1bQ8BHD1 476 aa18.8■□□□□ 0.6
Scn1b-201ENSMUST00000098548 MrgprfQ8VCJ6 343 aa18.8■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Olfr156Q8VGA9 318 aa18.8■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Rab1bQ9D1G1 201 aa18.8■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Prr15Q9D1T5 122 aa18.8■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Bin3Q9JI08 253 aa18.8■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Tsga8Q9JJL0 238 aa18.8■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Egr4Q9WUF2 478 aa18.8■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Olfr467L7N455 308 aa18.79■□□□□ 0.6
Scn1b-201ENSMUST00000098548 P18525 117 aa18.79■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Gm648Q3UJ22 213 aa18.79■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Gm10384Q3UQ87 92 aa18.79■□□□□ 0.6
Scn1b-201ENSMUST00000098548 A3galt2Q3V1N9 370 aa18.79■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Olfr1058Q7TR74 316 aa18.79■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Ifna13Q80SU4 189 aa18.79■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Q80X32 188 aaKnown RBP18.79■□□□□ 0.6
Scn1b-201ENSMUST00000098548 PigmQ8C2R7 423 aa18.79■□□□□ 0.6
Scn1b-201ENSMUST00000098548 SbsnQ8CIT9 700 aa18.79■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Hspa12aQ8K0U4 675 aa18.79■□□□□ 0.6
Scn1b-201ENSMUST00000098548 MpiQ924M7 423 aa18.79■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Rnaseh2cQ9CQ18 166 aa18.79■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Rpp14Q9CQH8 122 aa18.79■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Fabp9O08716 132 aa18.78■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Rpl12P35979 165 aaKnown RBP18.78■□□□□ 0.6
Scn1b-201ENSMUST00000098548 P2ry1P49650 373 aa18.78■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Zfp936Q3ULA8 456 aa18.78■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Lcn10Q810Z1 182 aa18.78■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Q8VCE4 163 aa18.78■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Olfr1269Q8VEZ2 309 aa18.78■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Olfr1265Q8VEZ3 309 aa18.78■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Znhit3Q9CQK1 151 aa18.78■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Gar1Q9CY66 231 aaKnown RBP18.78■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Tex43Q9D9I1 141 aa18.78■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Cir1Q9DA19 450 aa18.78■□□□□ 0.6
Scn1b-201ENSMUST00000098548 C2cd3Q52KB6 2323 aa18.77■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Gm5819E9PZ96 154 aa18.77■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Gm9970F6ZED4 185 aa18.77■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Serf1O88892 62 aa18.77■□□□□ 0.6
Scn1b-201ENSMUST00000098548 IappP12968 93 aa18.77■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Prss44Q402U7 372 aa18.77■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Nmnat3Q99JR6 245 aa18.77■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Zfp869Q9DC47 529 aa18.77■□□□□ 0.6
Scn1b-201ENSMUST00000098548 LenepQ9WVB6 61 aa18.77■□□□□ 0.6
Scn1b-201ENSMUST00000098548 Ighv5-8A0A075B676 92 aa18.76■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Gm20821J3QPJ2 227 aa18.76■□□□□ 0.59
Scn1b-201ENSMUST00000098548 P01725 110 aa18.76■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Slc6a9P28571 692 aa18.76■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Pax2P32114 414 aa18.76■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Nkx2-1P50220 372 aa18.76■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Efnb2P52800 336 aa18.76■□□□□ 0.59
Scn1b-201ENSMUST00000098548 StumQ0VBF8 141 aa18.76■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Ndufa2Q9CQ75 99 aa18.76■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Tmem126aQ9D8Y1 196 aa18.76■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Ighv5-9A0A075B5Q2 117 aa18.76■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Iglv3A0A0B4J1K5 122 aa18.76■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Cldn34dA2AGU5 210 aa18.76■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Olfr432E9Q8M2 312 aa18.76■□□□□ 0.59
Scn1b-201ENSMUST00000098548 MyadmO35682 320 aaKnown RBP18.76■□□□□ 0.59
Scn1b-201ENSMUST00000098548 PkiaP63248 76 aa18.76■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Gm5615Q3UW02 101 aa18.76■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Rbm48Q8K2X2 371 aa18.76■□□□□ 0.59
Scn1b-201ENSMUST00000098548 GcaQ8VC88 220 aa18.76■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Olfr355Q8VFP6 310 aa18.76■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Ndufb7Q9CR61 137 aa18.76■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Iglc3P01845 104 aa18.75■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Mmp9P41245 730 aa18.75■□□□□ 0.59
Scn1b-201ENSMUST00000098548 SgcaP82350 387 aa18.75■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Ear1P97426 155 aa18.75■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Klhdc1Q80YG3 406 aa18.75■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Olfr1184Q8VG86 311 aa18.75■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Olfr167Q8VGJ5 312 aa18.75■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Olfr979Q8VH10 311 aa18.75■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Lurap1Q9D6I9 239 aa18.75■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Cldn23Q9D7D7 296 aa18.75■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Vstm5Q9D806 199 aa18.75■□□□□ 0.59
Scn1b-201ENSMUST00000098548 TncQ80YX1 2110 aa18.74■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Fthl17bA2AHC5 176 aa18.74■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Fthl17cA2AHC6 176 aa18.74■□□□□ 0.59
Scn1b-201ENSMUST00000098548 1700003H04RikE9PXM2 192 aa18.74■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Siva1O54926 175 aa18.74■□□□□ 0.59
Scn1b-201ENSMUST00000098548 CrpP14847 225 aa18.74■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Olfr143P34985 313 aa18.74■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Neurog3P70661 214 aa18.74■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Fthl17fQ3SXD2 176 aa18.74■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Ypel2Q65Z95 119 aa18.74■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Olfr875Q7TRE5 310 aa18.74■□□□□ 0.59
Scn1b-201ENSMUST00000098548 Atpaf1Q811I0 324 aa18.74■□□□□ 0.59
Retrieved 100 of 22,080 RNA–protein pairs in 30.8 ms