RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 SelenopP70274 380 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Lyplal1Q3UFF7 239 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Serinc5Q8BHJ6 461 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Cthrc1Q9D1D6 245 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Fam166aQ9D4K5 319 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 AplnrQ9WV08 377 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Prob1A0A087WR45 1010 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Vmn1r119E9Q4H3 307 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Ighg2cF6TQW2 404 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 P01864 335 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Klf4Q60793 483 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Prss50Q8BLH5 439 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Gkn3Q9D0T7 191 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Mrpl30Q9D7N6 160 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Smdt1Q9DB10 107 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Nat8f4G5E8L3 226 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 TspoP50637 169 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Trappc1Q5NCF2 145 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Defa22Q8C1N8 93 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Gpr84Q8CIM5 396 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Ear10Q923L6 156 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Rbfox1Q9JJ43 396 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Crybg1A0A0G2JG52 2065 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Igkv17-127A0A0G2JDN5 117 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Gm28729A0A1B0GSW2 409 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Wfdc21Q8BTE6 63 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Rasl11bQ922H7 247 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 TslpQ9JIE6 140 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Mmp17Q9R0S3 578 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Gm20830J3KML6 227 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Olfr1131Q7TR45 309 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Lrrc3bQ8VCH9 259 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Plxdc1Q91ZV7 500 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Q9CYS6 286 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Ighv5-12A0A075B5Q4 117 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 BsxQ810B3 232 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Mtfp1Q9CRB8 166 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Ly96Q9JHF9 160 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Bhlha15Q9QYC3 197 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Prelid3aQ8VE85 172 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Gpx6Q91WR8 221 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Tbx19Q99ME7 446 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Insl6Q9QY05 191 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Scgb2a2J3KMP9 96 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Hoxa3P02831 443 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Siah2Q06986 325 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Chrdl2Q8VEA6 426 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Tmem144Q8VEH0 348 aa10.47□□□□□ -0.73
Trim56-201ENSMUST00000054384 Stxbp6Q8R3T5 210 aa10.46□□□□□ -0.73
Trim56-201ENSMUST00000054384 Olfr1324Q8VEU7 332 aa10.46□□□□□ -0.73
Trim56-201ENSMUST00000054384 Mrpl18Q9CQL5 180 aa10.46□□□□□ -0.73
Trim56-201ENSMUST00000054384 VhlP40338 181 aa10.46□□□□□ -0.73
Trim56-201ENSMUST00000054384 Crybb2P62696 205 aa10.46□□□□□ -0.73
Trim56-201ENSMUST00000054384 Wdyhv1Q80WB5 209 aa10.46□□□□□ -0.73
Trim56-201ENSMUST00000054384 Scmh1Q8K214 706 aa10.46□□□□□ -0.73
Trim56-201ENSMUST00000054384 VitQ8VHI5 650 aa10.46□□□□□ -0.73
Trim56-201ENSMUST00000054384 Mpdu1Q9R0Q9 247 aa10.46□□□□□ -0.73
Trim56-201ENSMUST00000054384 Olfr1535Q7TQU0 326 aa10.46□□□□□ -0.73
Trim56-201ENSMUST00000054384 Suv39h2Q9EQQ0 477 aa10.46□□□□□ -0.73
Trim56-201ENSMUST00000054384 Gm5741B2RVA4 72 aa10.46□□□□□ -0.73
Trim56-201ENSMUST00000054384 CirbpP60824 172 aaKnown RBP10.46□□□□□ -0.73
Trim56-201ENSMUST00000054384 Pdlim4P70271 330 aa10.46□□□□□ -0.73
Trim56-201ENSMUST00000054384 Olfr1370Q8VFG4 316 aa10.46□□□□□ -0.73
Trim56-201ENSMUST00000054384 Sf3b5Q923D4 86 aaKnown RBP10.46□□□□□ -0.73
Trim56-201ENSMUST00000054384 Olfr926Q9EQ98 308 aa10.46□□□□□ -0.73
Trim56-201ENSMUST00000054384 P01796 113 aa10.46□□□□□ -0.74
Trim56-201ENSMUST00000054384 P01797 113 aa10.46□□□□□ -0.74
Trim56-201ENSMUST00000054384 P01799 113 aa10.46□□□□□ -0.74
Trim56-201ENSMUST00000054384 Pcbp4P57724 403 aaKnown RBP10.46□□□□□ -0.74
Trim56-201ENSMUST00000054384 Znf250Q7TNU6 535 aa10.46□□□□□ -0.74
Trim56-201ENSMUST00000054384 Fam206aQ80ZQ9 193 aaKnown RBP10.46□□□□□ -0.74
Trim56-201ENSMUST00000054384 Spock3Q8BKV0 436 aa10.46□□□□□ -0.74
Trim56-201ENSMUST00000054384 Fitm1Q91V79 292 aa10.46□□□□□ -0.74
Trim56-201ENSMUST00000054384 Acyp2P56375 106 aa10.46□□□□□ -0.74
Trim56-201ENSMUST00000054384 Tmprss11fQ8BHM9 439 aa10.46□□□□□ -0.74
Trim56-201ENSMUST00000054384 Gm2026A2ART4 498 aa10.46□□□□□ -0.74
Trim56-201ENSMUST00000054384 Gm10277Q6R5C6 214 aa10.46□□□□□ -0.74
Trim56-201ENSMUST00000054384 Lysmd1Q9D0E3 226 aa10.46□□□□□ -0.74
Trim56-201ENSMUST00000054384 Rpl34Q9D1R9 117 aaKnown RBP10.46□□□□□ -0.74
Trim56-201ENSMUST00000054384 Oc90Q9Z0L3 485 aa10.46□□□□□ -0.74
Trim56-201ENSMUST00000054384 Mmp9P41245 730 aa10.45□□□□□ -0.74
Trim56-201ENSMUST00000054384 Hoxc4Q08624 264 aa10.45□□□□□ -0.74
Trim56-201ENSMUST00000054384 Il18bpQ9Z0M9 193 aa10.45□□□□□ -0.74
Trim56-201ENSMUST00000054384 Vmn1r78K7N608 313 aa10.45□□□□□ -0.74
Trim56-201ENSMUST00000054384 Vstm2lQ6PDS0 220 aa10.45□□□□□ -0.74
Trim56-201ENSMUST00000054384 Olfr1434Q7TQR9 312 aa10.45□□□□□ -0.74
Trim56-201ENSMUST00000054384 Ercc8Q8CFD5 397 aa10.45□□□□□ -0.74
Trim56-201ENSMUST00000054384 Olfr1404Q8VGE1 313 aa10.45□□□□□ -0.74
Trim56-201ENSMUST00000054384 Rabac1Q9Z0S9 185 aa10.45□□□□□ -0.74
Trim56-201ENSMUST00000054384 Dock1Q8BUR4 1865 aa10.45□□□□□ -0.74
Trim56-201ENSMUST00000054384 PrnA0A075B668 197 aa10.45□□□□□ -0.74
Trim56-201ENSMUST00000054384 Trbv5A0A0B4J1G9 113 aa10.45□□□□□ -0.74
Trim56-201ENSMUST00000054384 PtcraP0C6B2 199 aa10.45□□□□□ -0.74
Trim56-201ENSMUST00000054384 Defa-rs2P17534 91 aa10.45□□□□□ -0.74
Trim56-201ENSMUST00000054384 Hoxd11P23813 323 aa10.45□□□□□ -0.74
Trim56-201ENSMUST00000054384 Nkx6-3Q3UHX8 262 aa10.45□□□□□ -0.74
Trim56-201ENSMUST00000054384 Olfr149Q60888 311 aa10.45□□□□□ -0.74
Trim56-201ENSMUST00000054384 RalyQ64012 312 aaKnown RBP10.45□□□□□ -0.74
Trim56-201ENSMUST00000054384 Defb7Q91V70 71 aa10.45□□□□□ -0.74
Trim56-201ENSMUST00000054384 Cldn16Q925N4 235 aa10.45□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 68.7 ms